Bifidobacterium breve UCC2003: Bbr_0371
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Entry
Bbr_0371 CDS
T02534
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bbru
Bifidobacterium breve UCC2003
Pathway
bbru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bbr_0371 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbru03019
]
Bbr_0371 (pnp)
03016 Transfer RNA biogenesis [BR:
bbru03016
]
Bbr_0371 (pnp)
Enzymes [BR:
bbru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Bbr_0371 (pnp)
Messenger RNA biogenesis [BR:
bbru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Bbr_0371 (pnp)
Transfer RNA biogenesis [BR:
bbru03016
]
Prokaryotic type
tRNA degradation factors
Bbr_0371 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
RNase_PH_C
KH_2
Mug135_C
PCB_OB
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ABE95071
LinkDB
All DBs
Position
496090..498801
Genome browser
AA seq
903 aa
AA seq
DB search
MEGPEIKAVEAVIDNGTFGKRTLRFETGRLAQQADGAVAAYLDDDSMILSTTTAGSSPKE
NYDFFPLTVDVEEKMYAAGKIPGSFFRREGRPSSEAILACRIIDRPLRPLFPHTLRNEVQ
VVETVLAVNPDDAYDVIALNAASASTMISGLPFEGPVSGVRLALIDGQWVAFPRWSERER
AVFEIVVAGRVVENGDVAIAMIEAGAGKNAWHLIYDEGQTKPDEEVVAAGLEAAKPFIKV
ICEAQDELKKIAAKETKEFQLFPEYTDELYARIDEIAHKDLDEALSIAEKLPRQDRIHEI
KEHVREVLADEFTDMDDAEKDKELGNAFKELQRQIVRRRILTEDYRIDGRGLRDIRTLSA
EVDIVPRVHGSALFQRGETQILGVTTLNMLKMEQQIDALSGPQSKRYMHNYEMPPYSTGE
TGRVGSPKRREIGHGALAEKALVPVLPSREDFPYAIRQVSEAIGSNGSTSMGSVCASTLS
LLAAGVPLKAPVAGIAMGLVSGDVDGQHIFKTLTDILGAEDAFGDMDFKVAGTSEFITAL
QLDTKLDGIPADILAAALQQAKEARATILEVINECIDGPAEMSEFAPRIITTTVPVEKIG
EVIGPKGKMINQIQEDTGAEIAIEDDGTVFISSEGGEAAEKAKSIIDSIANPHVPEAGET
YNGKVVKTTSFGAFVNLTPGTDGLLHISQIRNLANGERIDAVEDVLKEGDTVEVVVQGVD
DRGKISLAIPGFEDQENNAGSRGGRGDRDDHRGSRGRDDRRGGGRGRRSDRDDRDFDDRD
DRPRRRRSDDFEDDYEDRPRRRRSDDRDFDRDDRDSRDEDRPRRRRSADFEDDYEDRPRR
RRSDDRGDRDDRRGGSRGGRGRGSDRNPRYATDDNYDDYRADREERSERPRRRVRRDFDP
FED
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcccgaaatcaaggccgttgaggccgtaatcgacaatggaacgtttggcaag
cgcacgctgcgcttcgagaccggccgcctggcacagcaggctgatggtgctgtggctgcc
tacctcgatgacgattccatgattctgtccaccaccaccgccggctccagcccgaaggag
aactacgacttcttcccgctgaccgtcgacgttgaagagaagatgtacgccgccggcaag
atcccgggctcgttcttccgccgtgaaggccgtccgagctccgaggccatcctcgcctgc
cgcatcatcgaccgtccgctgcgcccgctgtttccgcacacgctgcgcaacgaggtgcag
gtcgtcgagaccgtgctcgccgtgaaccctgatgacgcctacgacgtcatcgccctgaac
gccgcctccgcctccaccatgatttccggtctgccgttcgaaggcccggtctccggtgtg
cgtctggccctgatcgacggccagtgggtcgccttcccgcgctggagcgagcgtgagcgc
gccgtgttcgagattgtggtcgccggccgcgttgtcgagaacggtgacgtcgccatcgcc
atgatcgaggccggcgccggcaagaacgcctggcacctcatctacgacgagggccagacc
aagcctgatgaggaagtcgtggccgccggtcttgaggccgccaagccgttcatcaaggtg
atttgcgaggctcaggacgagctcaagaagatcgccgccaaggagaccaaggaattccag
ctcttcccggagtacaccgacgagctgtacgcccgcatcgacgagatcgctcacaaggat
ctggacgaggccctctccatcgccgagaagctgccgcgccaggaccgcatccacgagatc
aaggagcacgtgcgcgaggtgctcgcggacgagttcaccgatatggacgatgccgagaag
gacaaggaactcggtaacgccttcaaggagctgcagcgccagatcgtgcgtcgccgcatc
ctgaccgaggactaccgcatcgacggccgtggcctgcgcgacatccgcaccctgtccgcc
gaggtggacattgtgcctcgcgtgcacggttccgccctgttccagcgtggcgagacccag
attctgggcgtcaccaccctgaacatgctcaagatggagcagcagatcgacgctctgtcc
ggtccgcagtccaagcgctacatgcacaactacgagatgccgccgtactccactggtgag
accggtcgcgtcggctccccgaagcgccgcgaaatcggccacggtgccctcgccgagaag
gctctcgtgccggtgctgccgagccgtgaggacttcccctacgccattcgccaggtctcc
gaggccattggctccaacggttccacttccatgggttccgtctgcgcctccaccctgtcc
ctgcttgccgccggcgtgccgctgaaggctccggttgccggcatcgccatgggccttgtg
tccggcgatgttgatggccagcacatcttcaagaccctcaccgatatcctgggcgccgag
gatgccttcggcgacatggacttcaaggtggcgggtacctctgagttcatcactgccctg
cagctcgacaccaagctcgacggcatccccgccgatatcctggccgccgctctgcagcag
gccaaggaagctcgcgccacgattctcgaggtcattaacgagtgcatcgacggcccggct
gagatgagcgagttcgctccgcgcatcatcaccaccaccgttccggtcgagaagatcggc
gaggtcatcggcccgaagggcaagatgatcaaccagattcaggaagacaccggtgctgag
atcgctatcgaggatgacggtaccgtcttcatctcctccgaaggtggcgaggcagccgag
aaggccaagtccatcatcgactccatcgccaacccacacgtgcctgaggccggcgagacc
tacaacggcaaggtcgtcaagaccacgagcttcggtgctttcgtgaacctcactcctggc
accgacggtctgctgcacatctcccagattcgcaacctggccaacggcgagcgtatcgac
gccgttgaggacgtgctgaaggaaggcgacaccgttgaggtcgtcgtgcagggcgttgac
gatcgcggcaagatttccctggctatccccggtttcgaggatcaggagaacaacgccggt
tcccgtggtggccgtggtgatcgtgatgatcaccgtggtagccgtggccgtgatgatcgc
cgtggcggtggccgtggccgtcgctccgaccgtgacgatcgcgacttcgacgatcgcgac
gaccgtccgcgtcgccgtcgctccgacgatttcgaggatgactacgaggatcgtccgcgt
cgccgtcgttccgatgatcgcgacttcgaccgtgacgaccgcgattcccgcgatgaggat
cgtccgcgtcgccgtcgctccgccgatttcgaggatgactacgaggatcgtccgcgtcgc
cgtcgttccgatgaccgtggcgatcgtgatgaccgccgtggtggctcccgtggcggccgt
ggccgtggctccgaccgcaacccgcgctacgccaccgacgacaactacgacgactaccgc
gccgaccgcgaagagcgctccgagcgcccgcgccgccgcgttcgccgcgacttcgatccc
ttcgaggactga
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