KEGG   Bifidobacterium breve UCC2003: Bbr_0647
Entry
Bbr_0647          CDS       T02534                                 
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
bbru  Bifidobacterium breve UCC2003
Pathway
bbru00300  Lysine biosynthesis
bbru00470  D-Amino acid metabolism
bbru01100  Metabolic pathways
bbru01110  Biosynthesis of secondary metabolites
bbru01120  Microbial metabolism in diverse environments
bbru01230  Biosynthesis of amino acids
Module
bbru_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:bbru00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Bbr_0647 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Bbr_0647 (dapF)
Enzymes [BR:bbru01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     Bbr_0647 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: ABE95338
LinkDB
Position
847111..848010
AA seq 299 aa
MSLPQRVTKTHATGNDFVVYLDKTGDFEPTADEIRFLCDRHFGIGGDGLIRLTKPEFVSD
LSDEQIMAVQAGDAEWFMDYRNADGSLAEMCGNGTRAITLFAQREGVADSTEPFRLGTRA
GVKILTPRGNVKPYGANVFQVEMGEWKIGETDAYEVTIPGNDGSARGTFVDMGNPHVVAV
IEDAFSTLPVVEDLDLVTKPVVNPTIESDQNVEFVRIDDIDHNTAVGEATMRVNERGCGE
TLSCGTGLCATGIVLRAKTGISHWDITVRGGTLRVDVTDEDVKLTGSATLVADIDLLRS
NT seq 900 nt   +upstreamnt  +downstreamnt
atgagtcttccgcaacgagtaactaagacacacgcaaccggcaatgatttcgtggtgtac
ctcgacaaaaccggcgatttcgagcccactgccgatgagatacggttcctgtgcgaccgt
catttcggcatcggcggcgatggactgattcgcctgaccaagcctgagttcgtgtctgat
ctgagcgatgagcaaatcatggctgtgcaggcaggtgacgctgaatggttcatggactat
cgcaatgcagacgggtcgttggctgagatgtgcggcaacggcacacgcgccatcacttta
ttcgcccagcgtgagggcgtggctgactccaccgagccgttccgacttggaacccgagcc
ggcgtcaagattctgacccctcgtggcaacgtgaagccgtatggtgccaatgtgttccag
gtggaaatgggggagtggaaaatcggcgagaccgacgcctatgaagtcactattcccggc
aacgatggctcggcacgtggcacgttcgtcgacatgggcaacccgcatgtggtggcggtg
attgaagatgccttctccacgctgccagtggtcgaggatctggatttggttaccaagccg
gtggtcaacccaactatcgaatccgatcagaacgtggaattcgtgcgtattgatgatatc
gaccacaacaccgcagtgggtgaggcgacgatgcgtgtcaacgaacgaggctgcggagag
accctctcctgcggtacgggcttgtgcgccacaggcattgtgctacgcgccaagaccggc
atctcacactgggacatcaccgtgcgcggcggcactctgcgagtggacgtgaccgacgag
gacgtcaaactcaccggctcggccacgctggttgccgatatcgatttgctccgttcctga

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