Bifidobacterium breve UCC2003: Bbr_0647
Help
Entry
Bbr_0647 CDS
T02534
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bbru
Bifidobacterium breve UCC2003
Pathway
bbru00300
Lysine biosynthesis
bbru00470
D-Amino acid metabolism
bbru01100
Metabolic pathways
bbru01110
Biosynthesis of secondary metabolites
bbru01120
Microbial metabolism in diverse environments
bbru01230
Biosynthesis of amino acids
Module
bbru_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bbru00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Bbr_0647 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Bbr_0647 (dapF)
Enzymes [BR:
bbru01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Bbr_0647 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ABE95338
LinkDB
All DBs
Position
847111..848010
Genome browser
AA seq
299 aa
AA seq
DB search
MSLPQRVTKTHATGNDFVVYLDKTGDFEPTADEIRFLCDRHFGIGGDGLIRLTKPEFVSD
LSDEQIMAVQAGDAEWFMDYRNADGSLAEMCGNGTRAITLFAQREGVADSTEPFRLGTRA
GVKILTPRGNVKPYGANVFQVEMGEWKIGETDAYEVTIPGNDGSARGTFVDMGNPHVVAV
IEDAFSTLPVVEDLDLVTKPVVNPTIESDQNVEFVRIDDIDHNTAVGEATMRVNERGCGE
TLSCGTGLCATGIVLRAKTGISHWDITVRGGTLRVDVTDEDVKLTGSATLVADIDLLRS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttccgcaacgagtaactaagacacacgcaaccggcaatgatttcgtggtgtac
ctcgacaaaaccggcgatttcgagcccactgccgatgagatacggttcctgtgcgaccgt
catttcggcatcggcggcgatggactgattcgcctgaccaagcctgagttcgtgtctgat
ctgagcgatgagcaaatcatggctgtgcaggcaggtgacgctgaatggttcatggactat
cgcaatgcagacgggtcgttggctgagatgtgcggcaacggcacacgcgccatcacttta
ttcgcccagcgtgagggcgtggctgactccaccgagccgttccgacttggaacccgagcc
ggcgtcaagattctgacccctcgtggcaacgtgaagccgtatggtgccaatgtgttccag
gtggaaatgggggagtggaaaatcggcgagaccgacgcctatgaagtcactattcccggc
aacgatggctcggcacgtggcacgttcgtcgacatgggcaacccgcatgtggtggcggtg
attgaagatgccttctccacgctgccagtggtcgaggatctggatttggttaccaagccg
gtggtcaacccaactatcgaatccgatcagaacgtggaattcgtgcgtattgatgatatc
gaccacaacaccgcagtgggtgaggcgacgatgcgtgtcaacgaacgaggctgcggagag
accctctcctgcggtacgggcttgtgcgccacaggcattgtgctacgcgccaagaccggc
atctcacactgggacatcaccgtgcgcggcggcactctgcgagtggacgtgaccgacgag
gacgtcaaactcaccggctcggccacgctggttgccgatatcgatttgctccgttcctga
DBGET
integrated database retrieval system