Bifidobacterium breve UCC2003: Bbr_0989
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Entry
Bbr_0989 CDS
T02534
Symbol
uvrA2
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
bbru
Bifidobacterium breve UCC2003
Pathway
bbru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bbr_0989 (uvrA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbru03400
]
Bbr_0989 (uvrA2)
DNA repair and recombination proteins [BR:
bbru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bbr_0989 (uvrA2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Bbr_0989 (uvrA2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_16
AAA_29
AAA_21
RsgA_GTPase
AAA_23
AAA_15
APS_kinase
DnaJ_CXXCXGXG
Mtrc-MtrF_II-IV_dom
IIGP
Viral_helicase1
cobW
Cytochrome_C7
Cytochrom_c3_2
Motif
Other DBs
NCBI-ProteinID:
ABE95671
LinkDB
All DBs
Position
1250335..1253364
Genome browser
AA seq
1009 aa
AA seq
DB search
MAAAQTGTKRATGGAGAKTGKGKNGEVIVEKVMTSDSFLSREIKKAPLVEHDGSLVADIS
HIPNDLKITIQGAREHNLKDVDLAIPRNRMVVFTGLSGSGKSSLAFDTLFAEGQRRYVES
LSAYARQFLGQMDKPDVDFIEGLSPAVSIDQKTTNRNPRSTVGTITEIYDYLRLLFARTG
IPHCPECGEPVASQTPQQIVDTLLDYPERTRFQILAPVVKGRKGEFVDMLELLRSDGYAR
ALIDGEMKQLSDDIKLTKQKKHTIEVVVDRLVVKDGIRQRLTDSVETALKLANGSIVIDF
VDEEEGSPARRRPFSEHRSCPNGHVLELDEVEPRTFSFNAPYGACPACTGLGFKLEIDPE
LVISDPDKSLADGVIEPWSGTKMTSQYYGHILEGLAKEMGFSMKTPWKNLPTDVKHDILY
GHDFKVNVSYRNRWGRLREYSTGFEGVVRTLMRRHDETDSQSMREYYESYMREVPCQVCQ
GRRLKPEVLAVTVDGKSIFDVCDMPVVRELAWVNGLKLEGSAQMIAGEVLKEIKARLGFL
NDVGLDYLTLSRAAATLSGGEAQRIRLATQIGSGLVGVMYVLDEPSIGLHQRDNERLIET
LHHLRDLGNTLIVVEHDEDTIRQADWLVDIGPGAGEHGGEVIYSGPAKHLIEAKRSITGD
YIAHRREIAVPAKRRKVRKTQMLKVVGARENNLKNIDVSFPLGVLTVVTGVSGSGKSSLV
NSILYPVLADKLNGARIVPGKHTRVEGVDQVRKVIHVDQNPIGRTPRSNPATYTGVWDKI
RALFAKTPEAQVRGYGPGRFSFNVKGGRCEACHGDGTLKIEMNFLPDVYVECETCHGKRY
NRETLEVTYNGKTVSDILDMPIEEAANFFKAYTGISRYLKTLVDVGLGYIRLGQPAPTLS
GGESQRVKLATELQRRSDGKTVYILDEPTTGLHFEDVNKLLKVLQSLVDKGNTVIVIEHN
LDVIKEADWLIDLGPEGGDGGGTIVTQGTPEQVAECDESWTGKFLKPML
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
gtggcggcagcgcagactggcacaaagcgcgcaactggcggagcgggcgcgaaaaccggc
aagggcaagaacggcgaagtcatcgtggaaaaggtgatgaccagcgactcattcctgagc
cgcgaaatcaaaaaagcgccgctcgtcgaacatgacggttcgctggtagcggacatctcg
cacatcccaaacgacctcaagatcaccattcagggcgcacgagagcacaacctgaaagac
gtggatcttgcgattccacgcaaccgcatggtcgtgttcaccggcctgtccggttccggc
aaatcatcgctcgcgttcgacaccttgttcgccgaaggccagcgccggtacgtcgaatcc
ctgtccgcctacgcccgccagttcctaggccagatggacaagcccgacgtcgacttcatc
gaaggcctgagcccagccgtctccatcgatcagaagaccaccaaccgcaacccgcgttcg
accgtcggcaccatcaccgaaatctacgattacctgcgactgctcttcgcccgcaccggt
attccgcactgccccgaatgcggcgagccggtcgcatcccagaccccgcagcaaatcgtc
gacaccctgctcgattacccggaacgcacgcgattccagattctcgctcccgtggtcaag
ggccgcaagggcgagttcgtggatatgcttgaactgctgcgctccgacggttatgcccgc
gcgctcatcgacggcgaaatgaagcagctgtccgacgacatcaaactcaccaagcagaag
aagcacaccatcgaagtggtggtcgaccgacttgtggtcaaggacggcatccgccagcgc
ctgaccgactcggtggaaaccgcgctgaagctcgccaacggcagcatcgtcatcgacttc
gtggacgaggaggaaggcagccccgcgcgccgccgcccgttctccgaacaccgcagctgt
ccgaatggtcatgtgctcgaactcgatgaggtcgaaccgcgcacgttctccttcaacgcc
ccctacggcgcttgcccggcctgcaccggtctcggcttcaaactcgaaatcgacccggag
ctcgtgatctccgacccggataaatccctggccgacggtgtcattgagccgtggagcggc
accaagatgacctcccagtactacggccacatccttgaaggtctggccaaggaaatgggt
ttctccatgaagaccccgtggaagaatctgccgaccgacgtcaagcacgacatcctctac
ggccatgacttcaaagtcaacgtctcctaccgcaaccgttggggtcgcctgcgcgaatac
tccaccggctttgagggcgtggtgcgcacgctgatgcgccgccacgacgaaaccgactcg
cagtccatgcgcgaatactacgagtcctacatgcgcgaggtaccttgccaggtctgccaa
ggccgccgcctgaagcccgaagtgctcgcggtcaccgtggatggcaaatccatcttcgac
gtgtgcgatatgcccgtagtgcgcgaactcgcctgggtcaacgggctcaaactcgaaggc
tcggcacagatgatcgctggcgaggtcctgaaagagatcaaggcgcgactcggcttcctc
aatgacgtcggactcgactacctgaccctttcacgcgcggcagccaccttgtccggcggt
gaagcgcagcgcatccgactcgccacgcagatcggttccggtctggtcggcgtcatgtac
gtgctcgacgagccttccatcggcctgcaccagcgcgacaacgaacgactcatcgaaacc
ctgcaccatctgcgcgaccttggcaatacgctgattgtggtcgaacacgatgaggacacc
attcgtcaggccgactggctggtcgacatcggccccggagccggcgaacacggcggcgaa
gtcatctactccggccccgccaagcacctcatcgaggcgaagcgttccatcaccggcgac
tacatcgcccaccgtcgcgaaatcgccgtgcccgccaagcgccgcaaggtgcgcaagacc
cagatgctcaaggtcgtaggcgcacgtgagaacaacctcaagaacatcgacgtgagcttc
ccgctcggcgtgctcaccgtggtcaccggtgtctccggctccggcaaatcctcgcttgtc
aactcgatcctctacccggtgctcgccgacaagctcaacggcgcacgcatcgtgcccggc
aagcatacgcgcgtcgaaggcgtcgaccaggtgcgcaaagtgatccacgtcgatcagaac
ccgatcggccgcactccacgctccaacccagccacctataccggcgtgtgggacaagatt
cgtgcactcttcgccaaaacccccgaagcacaggtgcgcggctacggccccggccgattc
agcttcaacgtcaagggaggccgctgtgaagcctgccacggcgacggcacgctgaagatc
gaaatgaacttcctgccggacgtctacgtggaatgcgagacctgccacggcaaacgatac
aaccgtgaaaccctcgaagtcacgtacaacggcaaaaccgtttccgatattctcgatatg
cccatcgaagaggcagccaacttcttcaaggcctacaccggcatttcccgatatctgaag
accttggtggacgtcggcctcggatacatccggctcggccagcccgcgcccaccctgtcc
ggcggtgaatcgcagcgcgtcaaactcgccaccgaactgcaacgccgttccgacggcaag
accgtgtacatcctcgacgagccgaccaccggtctgcacttcgaagatgtaaacaagctg
ctcaaagtgctgcaatccctagtggacaagggcaatacggttattgtcatcgaacataat
ctggacgtgatcaaggaggccgattggttgattgatcttggtccggaaggcggtgacggc
ggcggcaccatcgttacgcagggcactcctgagcaggttgccgaatgcgacgaatcctgg
accggcaagttcctgaaaccgatgctatag
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integrated database retrieval system
