Bifidobacterium breve UCC2003: Bbr_1028
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Entry
Bbr_1028 CDS
T02534
Symbol
helY
Name
(GenBank) Helicase helY
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
bbru
Bifidobacterium breve UCC2003
Brite
KEGG Orthology (KO) [BR:
bbru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbru03019
]
Bbr_1028 (helY)
Enzymes [BR:
bbru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Bbr_1028 (helY)
Messenger RNA biogenesis [BR:
bbru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Bbr_1028 (helY)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
Sigma54_activat
nSTAND3
MTR4-like_stalk
Motif
Other DBs
NCBI-ProteinID:
ABE95709
LinkDB
All DBs
Position
1300002..1302590
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AA seq
862 aa
AA seq
DB search
MARHPHHQEGDSSRTLSPAQRYASFQKANKHRASVAARFAATLPFDLDDFQTEANDALEA
GSNVLVAAPTGAGKTVVADFAIYLAQERNVKAFYTTPIKALSNQKYHDLVDVYGPDKVGL
LTGDTSINSEADIVVMTTEVLRNMLYEHSTTLTALRYVILDEVHYLADRFRGPVWEEVII
HLPKTVKIVGLSATVSNVEDFSNWIASVRGETKLVISEHRPVPLEQHVIVQADEQTEPEV
LDLYRRDGNGNQTTKLNAELINRLDQLDRKAARRRGEERPDKRRGFKGKGGKGHRDRVPR
PERHTPRRWAVVDELNFLGMLPGIYFIFSRNGCDQAVEQCINAGLELTTDEEVTRIRRIV
DEMVEGQLTQEDLKALQFSKFRFALEEGFASHHAGMIALFRQIVERLFEEGLVKMVFATE
TLALGINMPARCVVVEKLEKFDGTGHVGLTPGEFTQLTGRAGRRGIDTIGHAIVVDHHGF
VPATAAALSSKRVYPLHSSFRPTFNMAVNLLNSSDYGTARITLDQSFAQWEANESAWQLE
SQINTLTNALAGYEQAFACNHGDFKQFMTLRMELSDIEKDGRRKLKHEVFLTDQDRSRAF
QDLDKRIQKLRKAEHEHPCRNCPDLQQHLKWGHRWARETRELNRVKYRYDSRTGSVARQF
DHICDILTQLGYLERHDDGNGRIDVTLTEKGLLLRRIYSEHDLELCEALLAGTFDKLDAN
GLAAVLSSLVYEARRGSDGEPRHYPGGISGPIAIASSKLQGICADINILCEDHSLEEMHQ
PDFGIVDIMYEWADGGSLGACLYGTDMTGGDFVRTAKRLADVLQQIAVAQPLPFDGGERL
ADIAHEAADRVNRGVVAYSGVD
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcaccctcaccatcaggaaggcgattcttcccgaacgcttagtcctgcccag
cgatacgcatcattccagaaagccaataaacacagagcatcggtcgcggctcgttttgcc
gctacactgccgttcgatcttgacgatttccagaccgaagccaacgacgcattggaggcc
ggcagcaatgtgctggtcgccgcaccgaccggcgcaggcaaaaccgtggtagccgatttt
gccatctatctggctcaggaacgcaacgtcaaagcgttttataccactcctatcaaggct
ctcagcaatcagaaataccatgatctggtagacgtatacggcccggataaggtaggcctg
ctcaccggtgacacctcgatcaattccgaggcggacatcgtggtgatgaccaccgaagta
ctgcgcaatatgctctacgagcattccaccacgctcaccgcactgcggtatgtgattctg
gacgaggtgcattaccttgccgaccgcttccgcggtccggtttgggaagaggtcatcatt
cacctgcccaagacggtgaaaatcgtgggattgtctgccacggtgtccaatgtggaggat
ttctccaactggatcgcatccgtgcgcggcgagaccaagctggtcatcagcgagcatcgc
ccggtgccgcttgaacagcacgtcattgtgcaggcggatgaacaaaccgagccggaggtg
ctggatctgtatcgcagggacggcaacggcaaccagactacgaagctcaacgccgagttg
atcaaccgactcgaccaactggaccgcaaggcggcacgccgccgtggtgaggaacggccc
gacaagcgcaggggattcaaaggcaagggcggaaaagggcacagggatcgcgtaccacgc
ccggagcgacacacgcctcgccgttgggccgtggtcgacgagctgaactttctgggcatg
ctacccggcatctacttcatcttctcgcgcaacggctgtgatcaggcggtcgagcagtgc
atcaatgccgggctggaactgaccaccgatgaggaagtgaccaggattcgccgcatcgtg
gacgagatggtggaaggtcagctcacccaagaggatctgaaggcgttgcagttctccaag
ttccgattcgctttggaagaaggattcgcctcacatcatgccggcatgatcgccctgttc
cgccaaattgtcgagcgcctgtttgaagagggccttgtcaaaatggtgttcgccacggaa
acgctggcgctgggcatcaatatgccggcacgctgcgtggtggttgagaagctggagaag
ttcgacggcaccggtcacgtgggtttgactcccggcgagttcacacagctgaccggacgt
gccggccgacgcggcatcgacaccatcggccatgccatcgtggtcgaccatcatggattc
gtgcccgccacggccgcggcattgtcttccaagcgtgtgtatccgttgcattccagcttc
cgtccgacgttcaatatggcggtgaatctgcttaattccagcgactatgggaccgcacga
atcaccttggatcagtcttttgcccaatgggaagccaatgaatccgcctggcagttggaa
tcgcagatcaacacgctcaccaatgcattggccggatacgaacaggcgttcgcctgcaat
catggcgatttcaagcagttcatgacgttgcgtatggagctcagcgacatcgagaaggat
ggccgccgcaaactcaagcacgaggtgttcctgaccgatcaggacagatctcgcgctttc
caggacctcgacaagcgcatccagaagctgcgcaaggccgagcacgagcatccatgccgc
aattgccccgacctccagcagcacctcaaatgggggcaccgctgggcccgtgagacccgg
gaactcaatcgggtgaagtatcgttatgactcgcgtaccggctctgtggcacgtcagttc
gaccatatctgcgacatccttacccagctcggctatctggagcggcatgatgacggcaac
ggccgtatcgacgtgaccctgaccgaaaaaggcctgctgttgcgccgtatttacagcgag
catgatctggaactctgcgaggcgctgcttgccggcactttcgacaagctcgatgccaac
gggctggccgcggtactttcctcgctggtgtacgaggccaggcgtggctcggacggcgaa
ccacggcattatccgggcggcatttccggccctatcgccatcgcatcgtccaaactgcaa
ggcatctgcgcggatatcaacatcctgtgcgaggatcacagcctagaagaaatgcaccag
ccggacttcggcatcgtcgacatcatgtacgaatgggccgacggcggttcgctgggtgca
tgcctgtacggcacggacatgaccggcggcgactttgtgcgcaccgccaaacgactggcc
gacgtactgcagcaaatcgccgtggcgcagccattgccgttcgatgggggagaacggttg
gcggatatcgcccatgaagcggctgatcgtgtgaaccgcggagtcgtggcctattccggc
gtcgattaa
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