Bifidobacterium breve UCC2003: Bbr_1167 Help Entry Bbr_1167          CDS       T02534                                  Symbol lhr Name (GenBank) ATP-dependent helicase lhr   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism bbru  Bifidobacterium breve UCC2003 Brite KEGG Orthology (KO) [BR:bbru00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:bbru03400]     Bbr_1167 (lhr) Enzymes [BR:bbru01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      Bbr_1167 (lhr)     5.6.2.6  RNA 3'-5' helicase      Bbr_1167 (lhr) DNA repair and recombination proteins [BR:bbru03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     Bbr_1167 (lhr) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WH_Lhr WH4_Lhr DEAD WH3_Lhr Helicase_C AlkZ-like ResIII DUF6406 Cas3-like_C_2 Motif Other DBs NCBI-ProteinID:  ABE95845 LinkDB All DBs Position complement(1451880..1456811) Genome browser AA seq 1643 aa AA seqDB search MVIAPTGSGKTLAAFLSAIDRLMTVSRTRRAGVRVLYVSPLKALAVDVAKNLEQPLEGIA AQCEAQGLPAPKIAVANRSGDTTAQERRRIASHPPDILVTTPESLYLLLTSKAGRILGTV DTVIVDEIHAVAGTKRGSHLALSLERLENLVAESRRRDAMDRNDGESKVSDDSGNEPLLQ RIGLSATVNPPEEAARFLTGGRPVTIVNPGGRPAMDLRMVEPLENMRDLQSVNAKQRVGG VDSERPTPHISGVTPAMQRLAERKGIAQTGDSGLSAGGNGVLVGGEAGAGGDGALLSGER TTGGAFDSAVLVGAAGDRTSGSIWPVVERSVLDEILAHRTTLVFVNSRGVAEKLTARLND LYAQTRHEVDPDLVRDMGSPEGREGFASHYDAVVGSTTMLVGSHEGDDVIAMAHHGSVSK ERRKMIEERLKRGELRCVVATSSLELGIDMGSVDLVIQIDTPLSVSSGLQRVGRADHQVG GVSHALFYPLTRQQIVTGAASLESMIAGDIEPLAVLKNPLDVLAQQTVAAAVMHDLKADD WYVTVRRSAPFADLPRDMFDAVIGMMSGEYNTEEFSAFRPRLVWNRDNGLISARPGSQKV AVTSGGTIPDRGLYTVVLPEVDAGKGQRRVGELDEEMVYESRVGDVITLGTSTWQIQDIT RDRVVVTPAPGRTARLPFWHGEGAGRDYGFSRAIARFTREIADGLVMEQGGYSGFPLRGE LSAERTEGRSTPTFTHAILTRLHQDGLDSNAIANLARLLSEQRAATGAVPSDRTLIVERT RDEDGGWRIVLLSPFGRRVHEPWSMAISRRLSQRYGFDVQVYAADDGIVLQLPEGDGHIL ACDLFLFDPEDLRADVERQVGKSVLFTSRFRECAARSLFMPRSDPGRRVPLWQQRLRGAQ LLQSARTVKNFPLLLETARECLQDVYDMPALNEVMTGLHSGTIALKDVETESPSPFAENT LFGFVGTVMYQYDQPQAERSTQLLSLDSQMLERLLGTTDMAKVLNPDVIREVEQELEKRT FWNELAADDVTGQVTRYAKTHGPFTADQIIAYLHLDAASVVHALDELAAKGDLLQGHFVD STSCSRWRELDAKRTEGGPYPEKGHPQSTPSTAPASGSEQQWLHKDVFRRIRSRSLDKAR KAVRPVEPEAFQMFLIDRQGIGPVGGERYEGTDGLMRVIEQLEGVALPAGLWETAIFPAR VRDYQPSMLDELLTGGDVVWVGSKAGGTGALEPGEIAFHPADSVLLGDTEASELSAGAAS SGRFDSKPDASADGDSETMPESIMTALTSGGAFHARQLADAAKRVWNETSEPDFNPDTGE IIPQEWSERQFKDALWSLVWQGRISNSSFAPVRALTAGTGGSRKASTSRRRGRVTPIRRA SADMTLGGLWSAVPGMGEDESTERALALVEALLDRYGVIAQPLIDKEDIPGGYSAVYPVL KRMEEHGRLVRGMFIHGFGAAQFAESDTVDALRHPSAHRSQSVVAVSVLDPANLSGSAIG WPDVPVSAGRPVRRAGAVVVLGSQGALLYAAAKAKHLTAFQRSADVGVVSAGSIETGAAS NGLTEGGVSSTESAFETSPDFGMTNDEQLRKAATELAYALKRSGNGTVTFSDMNGEPLNA RHPFARILHQAGFIPVPQGMRLY NT seq 4932 nt NT seq  +upstreamnt  +downstreamnt ttggtcatcgctcctactggctccggtaaaacattggccgcgtttctttccgccattgac cggctgatgaccgtgtctcgtacgcggcgtgcgggcgtgcgtgtgctgtatgtttcgcca ttgaaggcgctcgcagtcgacgtggccaaaaacctcgaacagccgttggagggtatcgct gcgcaatgtgaggcgcaggggctgcccgcgccgaaaatcgcggttgccaaccggtccggc gacaccactgctcaggagcgtcggcgcatcgcctcccatccgccggacatccttgtcacc acgcccgaatcgctctatctgctgctcacttccaaggccgggcggattctcggcaccgtc gacacggtaatcgtcgatgagattcatgcggtggccggtaccaagcgtggttcgcatctg gcattgagccttgaacggttggaaaacctggtcgccgaatcgcgcagacgcgacgcgatg gaccgcaatgacggcgaatccaaagtttcggatgattccggtaatgaacctcttctgcag cgtatcgggctgtccgccacggtcaatccgcccgaagaagccgcacgttttctgacaggc ggcagaccggttaccatcgtgaatcccggcggcaggcccgcgatggatctgcgtatggtc gaaccactggaaaacatgcgcgatctgcaatctgtgaacgccaagcagcgcgtcggcggc gtggactccgaacgtccgactccgcatatcagcggtgttacgccggccatgcaacggttg gcggagcgcaagggaatcgcgcaaacgggcgattccggtttgtctgcgggtgggaatggc gtgctggtcggcggcgaagccggtgctggtggagatggcgccctgttgtcgggcgagcgt acgacaggcggcgcctttgactccgctgtgctggtcggtgcggccggagaccggacttct ggctccatctggccggttgtggaacgcagcgtgcttgatgagattctggcacatcgcacc acgttggtgttcgtcaattcgcgtggcgtggccgagaagctcactgcgcggctcaatgac ctttatgcacaaacccggcatgaagtcgatcccgacttggtgcgggacatggggtcgccc gaaggccgtgagggtttcgcctcgcattatgatgcggtggtcggttccaccaccatgctg gtcggctcgcatgaaggcgatgacgtcatcgccatggcccaccatggttcggtctccaaa gagcgacgaaagatgatcgaggaacggctcaaacgcggcgaattgcgttgtgtggtggcc acctcgagcttagaactgggcattgatatgggttcggtcgatctggtgattcagattgac acgccactgtctgtttcctcgggtttgcagcgggtgggccgtgccgaccatcaggtgggc ggtgtctcgcatgcgttgttctatccgttgacccgccagcagatcgttaccggcgccgcc agtctggagtccatgatcgccggcgatatcgagccgcttgccgtattgaagaatccgctt gatgtacttgcccagcagaccgtggccgccgccgtgatgcatgacctcaaagcggacgac tggtatgtcaccgtgcgccggtcggcaccgtttgccgatttgccgcgtgacatgttcgac gcggtgatcggcatgatgtccggcgaatacaacaccgaggagttctccgccttccggccg cgactggtatggaatcgggataacggtcttatctcggcacgtcccggctcgcagaaagtg gcggtcacttcaggcggtacgattcctgatcgaggcctgtacaccgtggtattgcctgag gtggatgccggcaaagggcagcgccgtgtgggcgaactcgatgaggagatggtctatgaa tcgcgtgtcggcgatgtgatcacactcggcacttccacatggcagattcaggacattacg cgcgaccgtgtggtcgtcaccccggcgcccggacgaaccgcccgactgccgttctggcat ggtgagggagctggacgtgactacggtttcagccgcgccatagcccgcttcacccgtgaa atcgccgacggattggtgatggagcaaggtggctattctggcttccctctccgaggggag ctgtccgcggagcggactgaggggaggagcactccgaccttcacccacgcaatcctcacc cgcctccaccaagacggtctcgactctaacgccatcgccaacctcgcccgtctactttcc gaacaacgggccgccaccggtgcggtccccagtgatcggacccttatcgtggaacgtacc cgagatgaagatggtggctggcgcattgtgctcttaagcccattcggccgccgcgtccac gaaccctggtccatggccatcagtcgcagactcagccaacgctatggatttgacgttcag gtatatgccgctgatgacggcatcgtactgcagttgccggaaggcgacggacacattctc gcgtgtgacctattcctgttcgaccctgaagatctcagggcggacgtggaacgccaagtg ggcaaatccgtgttgttcacctcgagattccgcgaatgcgccgcacgctcactgttcatg ccccgctccgatcctggtcgtcgtgtgccactctggcaacagcgtcttcgtggcgcacaa ctcctgcaatccgcacgcacggtcaaaaactttccgctgcttctggagaccgcgcgcgaa tgcctgcaggacgtctacgacatgcccgcactgaacgaggtgatgaccggattgcactcc ggaaccatcgccttgaaggacgtggaaaccgagtcgccttcgccgttcgccgagaatacc ctcttcggcttcgtgggcacggtgatgtaccaatacgatcagcctcaggccgagcgcagc acacaactgctgtccctggactcgcagatgcttgagcgactgctcggcaccaccgacatg gccaaggtgctcaatcctgatgtgatccgagaagttgagcaggagctggagaagcggact ttctggaacgaacttgccgccgatgacgtgaccgggcaagtgacccgttacgcgaaaacc catggtccgttcaccgcagatcagatcatcgcctacctgcatcttgacgccgcaagcgtc gtacatgcattggacgagttggccgccaaaggggaccttctccaaggtcatttcgtggac tccacttcatgctcccgctggcgggagctggacgcgaagcggactgagggtggtccatat ccggagaagggccaccctcagtcgactccgtcgacggctcccgccagcgggagcgaacag caatggcttcataaggacgtgttccgtcgtattcgttcgcggtcattggacaaggcacgc aaggcagtgcggccagtggaaccggaagccttccaaatgttccttatcgacaggcagggc atcggtccggtcggcggtgagcgatacgagggtacggatgggctcatgcgtgtcatcgag cagctggagggtgtcgcgctgccggctggtctctgggagaccgcgatattccccgctcgc gtgcgtgactatcaaccgtcgatgctggacgaacttcttaccggtggcgatgtggtgtgg gtggggtccaaagccggcggcaccggtgccttggagcccggagagatcgccttccatccc gcggattcggtactgctgggcgataccgaggcctcggaactttcggcaggtgccgcatcc tccggacggttcgactccaagccggatgcatcggctgatggcgatagcgagaccatgcct gaatcgataatgacggcgttgacttcgggcggcgcatttcatgcccgtcagctggcagat gccgccaagcgcgtctggaatgagacctccgagccggacttcaacccagataccggcgag attatcccgcaggagtggagcgaacggcaattcaaggacgccttgtggagtctggtgtgg caaggcagaatcagcaattccagttttgcacctgtgcgtgcgctgactgcgggaactggt ggctctcgcaaggcttcgacctcgcgtcgacgcggtcgcgtgacaccaattcgtcgtgcc tctgcggatatgacgttgggcggcctatggtcggctgttcccggtatgggggaggacgag tcgacggagcgtgcgctcgcattagtcgaagcattgttggaccgctacggcgtgatcgca cagccgctgatcgacaaggaagatatcccgggtggttattcggccgtctatccggtattg aaacgcatggaggaacatggacgactggtgcgtggcatgttcatacatggcttcggcgcg gcgcaattcgccgaaagcgacacggtggatgcgctgagacatccgtcggcgcatcgcagc caatccgtggtggccgtgagcgtacttgatcccgcgaacctcagtggttcggcaatcggt tggcctgatgtgccagtaagtgcaggcaggcctgtacgccgtgccggagctgtagtcgta cttgggtcgcaaggtgcgttgctctatgcagccgccaaagccaagcatttgaccgcattc cagcgatctgccgatgtcggtgtcgtttccgctgggtcgattgaaactggtgcagcgtct aatgggctgactgagggtggtgtctcttctaccgagtcagcttttgagacttcccctgat ttcggcatgacgaatgatgaacagttacgcaaggcggccacagaactcgcatatgccctc aagcgcagcggcaatggcaccgtaactttcagcgatatgaacggcgagcctctcaatgcc cgacatcccttcgcccgcattcttcatcaggccggattcatccccgtgccacaaggtatg cggttgtactga

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