Bifidobacterium breve UCC2003: Bbr_1448
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Entry
Bbr_1448 CDS
T02534
Symbol
xseA
Name
(GenBank) Exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
bbru
Bifidobacterium breve UCC2003
Pathway
bbru03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Bbr_1448 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbru03400
]
Bbr_1448 (xseA)
Enzymes [BR:
bbru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Bbr_1448 (xseA)
DNA repair and recombination proteins [BR:
bbru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Bbr_1448 (xseA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
UBA
Motif
Other DBs
NCBI-ProteinID:
ABE96120
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All DBs
Position
1807615..1808970
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AA seq
451 aa
AA seq
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MGYSNTGQSPTAASLASAGFGPNTATEAGQGTVNLPDGPRPVDQLPRLAAETTAQNPWPV
SMLSQKFYGAVERWPSAWVTGQITQINTRRAGSAYITLRDDFEDIAMEVNGFGRFADTAR
QFIQGDRVVIHGKPNLWMKRTSLSLRGDTILKVGAGGSLKAMIDELRKRLKGEGLFDADH
KLPLPEFPKTIGLICAPQARAEGDVITNVNLRWPSVTFKVVHVHVQGEQCPGEVAQAIAR
LDTDPDVDVIIVARGGGSFEDLMGFSDERVVRAAYACTTPLISSIGHEDDWTLLDLVADL
RASTPTDAAKRVVPDVNEQTQLITGAIDRMRLRIRSRVDNEDRLIEGYANRPSLTQPLTM
LEPHQRLIDDSIQRLDIGLRRIVDDAQLTVEKAHASLTALSPQSTLNRGYAVVQSADGTV
LDDASTAHIGDDITVTLKKGVITATTTSAAA
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgggttactcgaacacgggccagtcgccgaccgccgcatctttggcctcggccggtttt
ggccccaacacggccaccgaagccgggcagggaaccgtcaacctgcccgacggcccgcgg
ccggtcgaccagctcccaaggcttgccgcagagaccaccgcgcagaatccctggccggtc
agcatgctgagccagaaattctatggggcggtggagcgctggccgtccgcgtgggtcacg
ggccagattacccagatcaacaccagacgggccggttcggcgtatatcaccctgcgcgac
gatttcgaagacatcgcaatggaggtcaatggctttggacggtttgccgacacggcccgg
caattcattcaaggcgatcgcgtggtcattcacggcaagcccaacctgtggatgaagcgc
acctccctctctttgcgcggagacaccattctcaaagtcggcgcaggtggcagcctcaag
gccatgatcgacgaattgcgcaagcgactcaaaggagaaggcctatttgacgcagaccat
aaactccctctgcccgaatttcccaagaccattggcctgatttgcgccccacaggcacga
gccgagggagatgtcatcactaacgtgaatcttcgctggccctcggtcaccttcaaggtt
gttcatgtgcatgtgcaaggtgagcaatgccccggcgaagtcgcacaagcgattgcacga
ctagacaccgatccagatgtggatgtcattatcgtggctcgaggaggcggctcattcgag
gacctcatgggcttctcggatgaacgcgtagtgcgtgccgcatatgcctgtaccacacca
ttgatttcctccatcggacatgaagacgattggaccctcctggacctggttgccgacctg
cgtgcttcaacccctacggacgcggccaaacgtgtggtgccggacgtcaacgaacagacg
cagctcattaccggagccatcgaccgtatgcgtctgagaattcgctcacgagtggataac
gaagatcgcctcatcgagggatacgcaaaccgccccagcctgacgcaacctctcaccatg
ctggagccgcatcagcgcttgattgacgattccatacagcgccttgatatcggcctgcga
agaatcgtggacgacgctcagctcaccgtcgagaaggcgcatgcctcactgaccgccctc
agcccccagtccacactcaaccgcggctatgccgtggtgcaatccgccgatggcaccgta
ctcgatgacgcttccaccgctcatatcggagacgacatcaccgtaaccttgaagaagggt
gtcatcacagccacaaccacatccgccgcagcgtaa
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