Bifidobacterium breve UCC2003: Bbr_1605
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Entry
Bbr_1605 CDS
T02534
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bbru
Bifidobacterium breve UCC2003
Brite
KEGG Orthology (KO) [BR:
bbru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbru03016
]
Bbr_1605 (truB)
Enzymes [BR:
bbru01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Bbr_1605 (truB)
Transfer RNA biogenesis [BR:
bbru03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Bbr_1605 (truB)
Prokaryotic type
Bbr_1605 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
SAMD1_SHD
Motif
Other DBs
NCBI-ProteinID:
ABE96274
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All DBs
Position
complement(1997509..1998696)
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AA seq
395 aa
AA seq
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MPKAWIKGTPHMPQTTPSGLLVIDKPQGVTSFDAVAAVRGALHIKKVGHAGTLDPMATGA
LVIAFGHATRLLNAIVAHDKTYEATIRLGLRTTTDDAEGEVLVDDEVRSRWLELSSQLTE
GGHSEGPSSLPASSWQQLLTRTIAANFTGDIEQIPNTFSAIKINGQRAYDLAREGKDVEL
KPRPVTISEFTVLAIRSGFVTGKQSDEALQERGMVSVLDVDVRVSCSSGTYIRALARDLG
DKLGVGGYLTRLRRTRVGNFALPDDTSGLLSPDAVSETQTHTIMAHTEQKTFTNREGETI
TRNKCVLDTPEGFDGAGRCAWLIGRSLTMEQAARSAMPALDITSKEAAELRFGRRIERTI
HEPAAAIVPQTHDVVAIIERANGHQAKPITVFPLA
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggcatggataaagggaacaccgcatatgcctcaaacaactccaagcggcctg
ctcgtcatcgacaagccgcaaggcgtgaccagtttcgatgcagtggccgccgtgcgcggc
gcgttgcatatcaagaaagtcggtcacgccggcacacttgatccgatggccaccggagcg
ttggtcatcgcattcggccatgccacgcgtctgctcaatgccatcgttgcacatgataaa
acctatgaggccaccattcgtctcggcttgcgcaccaccaccgacgatgccgaaggcgag
gtgcttgtcgatgacgaagtccgctcccgctggctggagctgtcgtcgcagctgactgaa
ggtggtcatagcgagggaccatcatcattgccagcttcctcgtggcagcagctactcact
cgcactatcgccgccaacttcaccggcgatatcgagcaaattcccaacactttttccgcc
atcaaaatcaatggtcagcgggcttatgacttggcccgcgaaggcaaggatgtggagctt
aagccacgtccggtcactatcagcgaattcactgtgctggctattcgcagtggattcgtg
acggggaaacagtctgatgaagcgttgcaagagcgcggaatggtttcagtattggacgtc
gatgtacgcgtcagctgctcgtcgggtacgtatattcgcgcattggcccgtgacttgggc
gacaagttgggtgtcggtggttatctgacccgtttgcgccgcaccagagtcggcaacttc
gccctgccggacgacaccagcgggcttctttcgcctgatgcggtgagcgagacgcagacc
catacgatcatggctcataccgagcagaaaacgtttaccaatcgcgaaggcgaaaccatc
actcgcaataagtgcgtgctcgacaccccggaagggtttgacggcgctggtcgatgcgca
tggctgattggtcgctcattgaccatggaacaggccgcccgcagcgccatgcccgctctt
gacattacgtcgaaggaagctgcggagctgcgttttgggcgtcgcatcgagcgcacgatt
catgagcctgccgccgccatcgtgccgcaaacccatgatgtggtggccatcatcgagagg
gcgaatggccatcaggccaagccgatcaccgtattccccctcgcgtaa
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