Bifidobacterium breve UCC2003: Bbr_1615
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Entry
Bbr_1615 CDS
T02534
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bbru
Bifidobacterium breve UCC2003
Pathway
bbru03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bbru00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Bbr_1615 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbru03021
]
Bbr_1615 (rpoA)
03400 DNA repair and recombination proteins [BR:
bbru03400
]
Bbr_1615 (rpoA)
Enzymes [BR:
bbru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Bbr_1615 (rpoA)
Transcription machinery [BR:
bbru03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Bbr_1615 (rpoA)
DNA repair and recombination proteins [BR:
bbru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Bbr_1615 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
ABE96284
LinkDB
All DBs
Position
complement(2010665..2011660)
Genome browser
AA seq
331 aa
AA seq
DB search
MLIAQRPTLTEESLNPQRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVRISGAL
HEFTTLPGVQEDVTEILLNIKGIVLTSEYDEPVVMYLRKSGKGEATAGDITPPSGVTIAN
PEQHIATLAEDGELEIEFTVERGRGYVPAQMNKQDTDEIGRIPVDSIYSPVLKVSYKVEA
TRVEQRTDFDKLILDVETKPAISPRDAVASAGSTLVELFGLCRELNAQAEGVEVGPAPVA
EETNPEMAVPIEDLNLTQRSYNCLKREGVHTIGELVSHTEQDLLDIRNFGMKSIDEVKEK
LQTLGLSLKSSPMAFDTNNLEGGTFFSPEDE
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgcttattgcacagcgtccgactctgaccgaggaatctctgaatccgcagcgctctcgc
ttcaccatcgagcctctcgagcctggcttcggctacacgctcggtaactcgttgcgtcgc
acgctgctgagttcgatcccgggtgctgccgtgacctccgtgcgtatctccggagccctg
catgagttcaccactctgccgggtgttcaggaagacgtcaccgagatcctgctcaacatc
aagggcatcgtgctcaccagcgagtatgacgagcctgtggtcatgtacctgcgcaagagc
ggcaagggcgaggctactgccggggacatcaccccgccgtctggcgtcaccattgccaat
ccggagcagcacatcgctaccctcgccgaggacggcgaactcgagatcgagttcaccgtt
gagcgtggccgtggctacgtgcctgcccagatgaacaagcaggacaccgatgagattggc
cgtattccggtcgattccatctactccccggtgctcaaggtgagctacaaggtcgaggcc
acccgtgtggaacagcgcacggacttcgacaagctcattctggacgtggagaccaagccc
gccatctccccgcgtgatgcggtggcttccgccggttcgaccctggtagagctcttcggc
ctgtgccgcgagctcaatgcccaggccgaaggcgtcgaggtcggtccggccccggtggcc
gaggagaccaaccccgagatggccgtcccgattgaggatctcaacctgacgcagcgttct
tacaactgcctcaagcgtgagggtgtccacaccatcggtgagctcgtctcccacaccgag
caggatctgctcgacatccgcaatttcggtatgaagtcgattgacgaagtcaaggagaag
ctgcagactctgggtctgagcctcaagtcttcgccgatggccttcgacaccaataacctc
gaaggcggcaccttcttctcgccggaagacgagtga
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