Bifidobacterium breve 689b: B689b_1196
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Entry
B689b_1196 CDS
T03119
Name
(GenBank) RNA polymerase principal sigma factor hrdB
KO
K03086
RNA polymerase primary sigma factor
Organism
bbrv
Bifidobacterium breve 689b
Brite
KEGG Orthology (KO) [BR:
bbrv00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
B689b_1196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbrv03021
]
B689b_1196
Transcription machinery [BR:
bbrv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B689b_1196
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DprA_WH
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AHJ23204
LinkDB
All DBs
Position
complement(1407216..1408634)
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AA seq
472 aa
AA seq
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MATKETTATKQTAESSEETETKKKASSTTARKTSAKKTKATKGTTAAKTGEKTSRKTSAK
KVKKEEELPQNDISQSDDPEDLDVDNLDEDLDDVESEDVDDLEDADAESDDEDIDDEDDE
DEEDEGKAASKAPEQPKEKGAYVVSDTDDEEENIIPAGNPKRRVIAAGATADPVKDYLKQ
IGRVSLLNAEQEVDLSERIEAGLYAQHLLDTESEGMEFKRKRELKWAAADGKKAKDHLLE
ANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDWKKGFKFSTYATWWIRQAITR
AMADQARTIRVPVHMVEVINKLSRVQRQMLQDLGREPTPDELARELDMPVEKVQEVQKYG
REPISLHTPLGEDGDSEFGDLIEDTDAIAPSDAVAFSLLQEQFKQVLETLSPREAGVIKM
RYGLEDGQPKTLDDIGRVYGVTRERIRQIESKTMSKLRHPSRSQTLRDFLDQ
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
ttggccacgaaggaaacgacggcaaccaagcagacagccgagtccagcgaggagaccgag
accaagaagaaggccagctctaccaccgcgcgtaagacctccgccaagaagaccaaggcc
acgaagggcaccacggctgccaagaccggtgagaagacttcacgtaagacttcggccaag
aaggtcaagaaagaggaggagcttcctcagaatgacatcagccaaagcgatgacccggaa
gatcttgacgtcgataaccttgatgaggatcttgacgacgtcgaatccgaggacgtcgat
gatcttgaagatgccgatgccgagtcggacgacgaagacattgacgatgaggatgacgaa
gacgaggaagacgaaggcaaggccgcatcgaaggctcctgagcagcccaaggagaagggt
gcttatgtggtttccgacacggatgatgaagaagagaacatcatccccgccggcaatccg
aagcgtcgtgtgattgcggcaggcgccaccgccgacccggtcaaggactacctcaagcag
attggtcgcgtcagcctgttgaacgccgaacaggaagttgacctgtccgagcgcatcgag
gccggcctgtacgcccagcatctgctcgataccgaaagtgaaggcatggagttcaagcgc
aagcgtgaactcaagtgggccgccgccgacggcaaaaaggccaaggatcatctgctggag
gccaacctgcgactcgtggtctcgcttgccaagcgctataccggccgcggcatgctgttc
ctcgatttgattcaggaaggcaaccttggtctgattcgtgccgtcgagaagttcgattgg
aagaagggcttcaagttctccacctacgccacgtggtggattcgtcaggccattacccgt
gctatggccgatcaggcccgtaccattcgtgtgcccgtgcacatggtcgaagtgatcaac
aagctgagccgtgtgcagcgccagatgctgcaggatctgggccgtgagcctacgccggac
gagctggcccgcgagctggacatgccggtcgaaaaggtgcaggaagtgcagaagtacggc
cgcgagccgatttccctgcacaccccgctcggtgaggacggcgattccgagttcggcgat
ctcatcgaggataccgatgccattgctccgtccgatgcagtggcgttttccctgctgcag
gagcagttcaagcaggtgctggaaaccctgtctccgcgtgaggccggtgtgatcaagatg
cgttacggtttggaggacggccagccgaagaccttggacgatattggccgtgtatatggc
gtgacccgagagcgtatccgccagatcgaatccaagaccatgtccaagttgcgccacccg
tcccgttcgcagaccctgcgcgacttcctggatcaatga
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