Bifidobacterium breve 689b: B689b_1642
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Entry
B689b_1642 CDS
T03119
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bbrv
Bifidobacterium breve 689b
Brite
KEGG Orthology (KO) [BR:
bbrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbrv03016
]
B689b_1642
Enzymes [BR:
bbrv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
B689b_1642
Transfer RNA biogenesis [BR:
bbrv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B689b_1642
Prokaryotic type
B689b_1642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AHJ23627
LinkDB
All DBs
Position
complement(1956710..1957621)
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AA seq
303 aa
AA seq
DB search
MTRLRIDLAYDGGGFYGWAKQPELRTVQGTIEDALHKVLRVPVGDEREPLRLTVAGRTDT
GVHASHQVAHLDVSDETLARCQGHMDVPLTEALARRLKAVLPADIVIHGIAIAPQGFDAR
FSALERTYVYRVADRSSEVDPRLRGCVLRVDESLDLDAMNAAAAMTIGLHDFGSFATPNP
GGTTIREVKTAYWRRVPVASLVPDVLAENEAYRTPSLESGLVVFTIVADAFARNMVRSLV
GSSIKVGSGRKTLEWFADKMANPVREGSSGPIAPQGLTLEHIEYPADDQLAARAEAIRAV
RTL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgacacgactacgcatcgaccttgcttatgacggcggcggattctacggctgggccaag
cagcctgagctgcgcacggtgcagggaactatcgaggatgcgttgcacaaggtgctgcgt
gtgccggtcggtgacgagagagagccgctgcgactgactgtggccggtcgtacggatacc
ggtgtgcacgcttcgcatcaggtggcgcatctggatgtgtctgatgaaacacttgctcgt
tgccaagggcatatggatgtgccgctgaccgaagcattggctcgcaggcttaaggccgtg
ctgcctgctgacattgtgattcacggcatcgccattgcgccgcagggattcgatgcgcgg
ttctccgcgttggagcgcacgtatgtgtaccgtgttgccgaccgttcatccgaagtggac
ccccggctgcgcggctgtgtactgcgcgtggatgagtcgctggatttggatgcgatgaat
gccgctgccgccatgaccattggcctgcatgattttggttcgtttgccacgccgaatccg
ggtggtaccacgattcgtgaagtcaagacggcctactggcgccgagtgccggttgcctcg
ttggtgccagacgtattggctgagaacgaggcataccggacgccgtcgctggaatccggc
ttggttgtattcacgattgtggccgatgcttttgctcgcaatatggttcgttcgctggtc
ggttcctcgatcaaggttggttcggggcgcaaaacgctggaatggtttgcggacaagatg
gccaatccggtgcgagaggggtcaagcgggccaatcgcaccgcaagggctgactctggaa
catatcgaatatccggcggatgaccagttggctgctcgtgccgaagccattcgtgccgta
cgtactttgtag
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