Bifidobacterium breve 689b: B689b_1765
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Entry
B689b_1765 CDS
T03119
Name
(GenBank) Ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
bbrv
Bifidobacterium breve 689b
Pathway
bbrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B689b_1765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbrv03019
]
B689b_1765
03009 Ribosome biogenesis [BR:
bbrv03009
]
B689b_1765
Enzymes [BR:
bbrv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
B689b_1765
Messenger RNA biogenesis [BR:
bbrv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B689b_1765
Ribosome biogenesis [BR:
bbrv03009
]
Prokaryotic type
rRNA processing factors
B689b_1765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DnaJ_CXXCXGXG
Actin_micro
RD3
Motif
Other DBs
NCBI-ProteinID:
AHJ23744
LinkDB
All DBs
Position
complement(2088264..2091359)
Genome browser
AA seq
1031 aa
AA seq
DB search
MQRAARSIVPTENREGFVGDETDNSTVSNTESQASGASEPNAEASQPTRRRRGGRRVVRG
AGAAGASLELQVQEHAAPLFEAPALSDADASASTGTADNNVSDDEKRPTRRTRSRRSADN
ADYEDRSTRRRAVADDDDAPRPVRRRRAVSDDLEEDDERPIRRRRVASDDFDEDNDRLVR
RRRSVIDDLEDDDAPRSSRRRTAVDDSDEDGDRPVRRRRSTTNDRDDRDDEPRSARRTRS
RRSSEDAREENPDERVLDVIDALPAGHESARRGKPMTSLLFQEPVLPDMRRDDRDDEEDD
GEQRSRSSRRSRAREDEADYEERPSRSRRSNRSDHGDHDDRDDHDDRDDSRNNRRRNEAQ
DDFDADDQSDSRRSRRSRRLNAQERRAAAEVEQIEEDLELDDITYSPIAEEENDEESDST
RTRSRRRRRRGSRNESGASNNDSESSENNGDDSRRRRDDRDERDRDDDEEQTVTRRRRRR
RGGKNAESGDEQDDQQLTRRSRKQQYIDEITDVEGSTRLEAKKQRRRDNRRERSRQSQLM
EQDFLARRENVDRLMVVREKEHHTQISVVEDNILVEHYVSDIQEVQTVGNIYLGRVQNVL
PSMEAAFVDIGQARNGVLYAGEVNWDAARLEGQPRRIELAFKSGDPVLVQVTKDPIGHKG
ARLTSQVTLAGRFLVLVPSGGMTGVSRKLSERERSRLKGIVSKIAPKDMGVIIRTAAEGA
SEEAIVKDLESLVRQWERINAKREEFWHGKRPKLLQGEPDVAIRVVRDIFNDDFGKLIVE
GDKVYDRIEEYLDTMAPDLKDKLEKWDPAEHEGKDVFDKWQIDSQLRKGMERQVYLPSGG
SIVIDRTEAMTTIDVNTGRFIGKGKSLEETVTRCNLEASEEIARQLRLRDIGGMVMIDYV
DMVMPANRDLVLRRLVECLARDRTKHQVAEVTSLGLVQMTRKRIGQGLVEAFSEECPTCK
GRGFILHDQPTVSADYDDPYALRGGDPFVKTNKHGRGTAPAPEPAGSSADVKAKLAQIAA
AAVAANNTEEE
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtgccgcgaggagcattgtgcccactgagaaccgtgaaggtttcgtcggtgac
gaaaccgataactcaaccgtatccaataccgaatcacaggcttcgggagcttccgagccg
aacgccgaagcatcgcagccgactcgccgccgtcgcggtggccgtcgtgtagtgcgtggt
gccggtgctgccggcgcatcccttgagctgcaagtccaggaacacgccgctccgctgttc
gaggcacccgcgttgtctgatgccgatgcatctgcttccacaggaactgccgacaataac
gtctccgatgacgagaagcgtccgacccgccgcacccgtagccgccgctctgccgataat
gccgattatgaggatcgttcgactcggcgtcgtgctgtggctgatgacgatgatgcgccg
cgtccggtccgccgtcgtcgcgcggtgtccgatgatctcgaggaagacgatgagcgtccg
attcgccgtcgtcgcgttgcatccgatgattttgatgaagataacgatcgtctggtgcgt
cgccgtcgctctgtgattgacgatctcgaagatgatgatgcgccgcgttcatctcgccgc
cgtactgcggtcgacgactccgatgaggatggcgatcgtccggtgcgtcgccgtcgttcc
actacgaatgaccgcgatgaccgcgatgacgagccccgctcggcccgtcgtactcgcagc
cgccgttcttcggaagacgcgcgcgaagaaaaccccgatgagcgcgtgctggatgtgatt
gatgcgctgcctgcagggcatgaatccgcccgtcgtggcaagccgatgacttccctgctg
ttccaagagccggtgctcccggacatgcgacgtgatgatcgtgatgatgaggaagatgat
ggcgaacagcgttcccgctcttctcgtcgctcccgcgcccgtgaggatgaggccgattac
gaggaacgcccgtctcgttcccgccggtcgaaccgcagcgatcacggcgatcatgatgac
cgcgatgatcacgatgaccgcgatgacagccgcaataaccgtcgccggaatgaggctcag
gatgatttcgacgctgatgaccagtccgattctcgccgttctcgccgttctcgccgcctg
aacgcccaggagcgccgtgctgccgccgaagtcgagcagattgaggaagacctcgagctg
gatgacattacgtactcgccgattgctgaagaggagaacgacgaagagtccgactccacc
cgcacccgttcccgtcgtcgccgtcgccgtggctcccgcaacgagtccggtgcttccaac
aacgacagcgagtcctccgagaacaatggtgacgattcccgtcgccgtcgcgatgatcgc
gatgagcgcgaccgtgatgatgacgaggagcagaccgttacccgccgtcgccgtcgccgc
cgcggaggcaagaatgccgagagcggtgatgagcaggacgatcagcagctgactcgccgc
tcccgcaagcagcagtacatcgatgagatcaccgatgtggaaggctccacccgtcttgag
gccaagaaacagcgacgccgtgacaatcgtcgtgagcgtagtcgccagagccagctcatg
gagcaggatttcctcgcacgccgtgagaacgtcgatcgcctcatggtggtgcgcgagaag
gaacatcacacccagatttccgtggtggaagacaacatcctggtcgagcattacgtctcc
gacatccaggaagtgcagaccgtgggcaacatctacctcggccgtgtacagaacgtgctg
cccagcatggaagccgctttcgtggacatcggccaggcccgtaacggcgtgctctacgcc
ggtgaggtcaactgggacgccgcgcgtctcgaaggccagccgcgccgcatcgagttggcg
ttcaagtccggcgacccggtgctcgtgcaggtcaccaaggatccgatcggacacaagggc
gcccgcctgacttctcaggtcacgctcgccggccgcttcctggtgctcgtgccgtccggc
ggcatgaccggcgtgagccgcaagctctccgaacgcgaacgtagccggctcaagggcatc
gtctccaagatcgccccgaaggatatgggtgtcatcatccgtaccgcagccgagggcgcc
tccgaggaagccatcgtcaaggatcttgagtctttggttcgccagtgggagcgcatcaac
gccaagcgtgaggaattctggcatggcaagcgcccgaagctcctgcagggcgagcccgat
gtggctatccgtgtggtgcgcgacatcttcaacgatgacttcggcaagctcatcgtcgaa
ggcgacaaggtctacgaccgtatcgaggagtatctcgacaccatggcccccgacttgaag
gataagctggagaagtgggacccggccgagcatgagggcaaggacgtgttcgacaagtgg
cagatcgactcccagctcagaaagggcatggagcgtcaggtctacctgccgtctggtggt
tcgatcgtcatcgaccgcactgaagccatgaccaccattgatgtgaacaccggccgcttc
atcggcaagggcaagtcccttgaggagacggtgacgcgttgcaatttggaggcctctgag
gaaattgcacgtcagctgcgactgcgcgacatcggcggcatggtgatgattgactatgtg
gatatggtcatgcccgctaaccgtgacttggtgctgcgccgtctagtcgaatgcctggcg
cgcgaccggaccaagcatcaggtggccgaggtcacctcgcttggtctggtgcagatgacc
cgtaagcgcatcggtcagggcctggtcgaggcgttctccgaggaatgcccgacttgcaag
ggtcgtggctttatcctgcacgatcagccgactgtttccgccgactacgatgacccgtac
gcattgcgcggcggtgatccgttcgtcaagaccaacaagcatggtcgaggcactgcccca
gctccggaaccggccggctccagcgctgatgtcaaggccaaactggcccagattgcagct
gctgccgtggccgccaacaacaccgaggaggagtag
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