Brettanomyces bruxellensis: BRETT_000028
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Entry
BRETT_000028 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BRETT_000028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbrx03041
]
BRETT_000028
Spliceosome [BR:
bbrx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
BRETT_000028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
PRP4
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_RIG_1st
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Ge1_WD40
WDR54
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
64571954
NCBI-ProteinID:
XP_041134801
UniProt:
A0A871QYB1
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Position
3:75413..76729
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AA seq
438 aa
AA seq
DB search
MEEASNLTEIVPTIDDDVKFVLRRFQQPIIYFGEGPLERRQRLIEFFSKNKNSMESFLSS
QAELGKESIAPSKSEEQKDEEFYTPGPDVLFDVRVRIADSSLNRAKIRTDKQRELYQNFD
MITELKSRRSYYATLKTMEIEGSQVISNRFTSALKFSYSSAFIAAGSWDGHCYILDPHSL
DVKRTFMDVGDGKISTLDWMPHSNEIVATGGSEGNITLLNMSAVHMKKYPKFYGHTDRVT
SLQFIPIDSLIASASYDMTWRLWDVETQKSLYYQEGHSKELTSLSCHPDGSLLATAGLDA
IIRIWDIRTGKSIAALEKNGHIRAIHGLAWRPNGYQLISGGADNNLKVWDLRRADSAATN
TVLAHSKVITDIKISPDDKYITSCGYDGYLNLISSDNFSVIKKFKNVDKLMCCDISSDSK
TIITGGWDRSVKIYHTEL
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagctagtaatttgaccgaaatcgttcctacgatagatgacgatgtgaaattt
gtgttaaggcgtttccaacaacctatcatatactttggtgaaggtccgttggaacgaaga
cagcggctcatagagttcttttcaaagaataaaaactccatggaaagttttctttcttca
caagcagaactgggcaaagaaagcattgctccctctaagtcagaggagcagaaagatgaa
gaattttatacaccagggcctgatgtgctctttgatgtgagggtgcgaatagcggattcc
tcccttaacagagcaaaaattaggactgataagcagagagaattgtaccagaactttgat
atgattacagaacttaaatccagacggtcgtattatgcaaccttgaagacgatggaaatc
gaaggttctcaggttatctcgaaccgtttcacatcggccctaaaattctcgtatagtagt
gctttcattgcagcgggatcctgggatggtcattgttatatattagatccacattctttg
gatgttaaacggacatttatggatgtaggagacggtaaaatttccacgttggattggatg
ccgcactcaaatgaaatagttgccaccggtggatctgaaggtaatattacattacttaac
atgtcagcagtacatatgaagaaatatccaaaattttatggtcacacagatagagtgaca
tccctacagtttattcccatcgatagtcttattgctagtgcatcgtatgatatgacctgg
agactttgggatgtcgaaacacagaaatcattatattaccaggaaggacattccaaagaa
ctgacttcattgagctgtcatccagatggatcacttctcgccactgccggtcttgatgcg
atcattagaatttgggatataagaacaggaaaatcaatagcagctcttgagaaaaatgga
catattcgtgcaatccatggcttagcctggcgcccaaatggatatcaacttattagtgga
ggtgcagataataaccttaaagtgtgggatttgagaagagccgattcagctgccacaaac
acagtgttggctcattcaaaggtcataacagacattaaaatttcccccgatgataagtac
attacatcctgtggctatgatggatatctgaatttgatatcaagtgataacttttcagtt
attaaaaaattcaaaaatgttgacaaattaatgtgttgtgacatctcttctgatagtaaa
acaatcattactggcggctgggacaggtcggttaaaatttatcacacggaactctaa
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