KEGG   Brettanomyces bruxellensis: BRETT_000028
Entry
BRETT_000028      CDS       T07183                                 
Name
(RefSeq) uncharacterized protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
bbrx  Brettanomyces bruxellensis
Pathway
bbrx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bbrx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    BRETT_000028
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bbrx03041]
    BRETT_000028
Spliceosome [BR:bbrx03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    BRETT_000028
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WDR55 Beta-prop_EML_2 WD40_WDHD1_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_HPS5 PRP4 Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_Nup120_160 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_RIG_1st Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Ge1_WD40 WDR54 Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 64571954
NCBI-ProteinID: XP_041134801
UniProt: A0A871QYB1
LinkDB
Position
3:75413..76729
AA seq 438 aa
MEEASNLTEIVPTIDDDVKFVLRRFQQPIIYFGEGPLERRQRLIEFFSKNKNSMESFLSS
QAELGKESIAPSKSEEQKDEEFYTPGPDVLFDVRVRIADSSLNRAKIRTDKQRELYQNFD
MITELKSRRSYYATLKTMEIEGSQVISNRFTSALKFSYSSAFIAAGSWDGHCYILDPHSL
DVKRTFMDVGDGKISTLDWMPHSNEIVATGGSEGNITLLNMSAVHMKKYPKFYGHTDRVT
SLQFIPIDSLIASASYDMTWRLWDVETQKSLYYQEGHSKELTSLSCHPDGSLLATAGLDA
IIRIWDIRTGKSIAALEKNGHIRAIHGLAWRPNGYQLISGGADNNLKVWDLRRADSAATN
TVLAHSKVITDIKISPDDKYITSCGYDGYLNLISSDNFSVIKKFKNVDKLMCCDISSDSK
TIITGGWDRSVKIYHTEL
NT seq 1317 nt   +upstreamnt  +downstreamnt
atggaagaagctagtaatttgaccgaaatcgttcctacgatagatgacgatgtgaaattt
gtgttaaggcgtttccaacaacctatcatatactttggtgaaggtccgttggaacgaaga
cagcggctcatagagttcttttcaaagaataaaaactccatggaaagttttctttcttca
caagcagaactgggcaaagaaagcattgctccctctaagtcagaggagcagaaagatgaa
gaattttatacaccagggcctgatgtgctctttgatgtgagggtgcgaatagcggattcc
tcccttaacagagcaaaaattaggactgataagcagagagaattgtaccagaactttgat
atgattacagaacttaaatccagacggtcgtattatgcaaccttgaagacgatggaaatc
gaaggttctcaggttatctcgaaccgtttcacatcggccctaaaattctcgtatagtagt
gctttcattgcagcgggatcctgggatggtcattgttatatattagatccacattctttg
gatgttaaacggacatttatggatgtaggagacggtaaaatttccacgttggattggatg
ccgcactcaaatgaaatagttgccaccggtggatctgaaggtaatattacattacttaac
atgtcagcagtacatatgaagaaatatccaaaattttatggtcacacagatagagtgaca
tccctacagtttattcccatcgatagtcttattgctagtgcatcgtatgatatgacctgg
agactttgggatgtcgaaacacagaaatcattatattaccaggaaggacattccaaagaa
ctgacttcattgagctgtcatccagatggatcacttctcgccactgccggtcttgatgcg
atcattagaatttgggatataagaacaggaaaatcaatagcagctcttgagaaaaatgga
catattcgtgcaatccatggcttagcctggcgcccaaatggatatcaacttattagtgga
ggtgcagataataaccttaaagtgtgggatttgagaagagccgattcagctgccacaaac
acagtgttggctcattcaaaggtcataacagacattaaaatttcccccgatgataagtac
attacatcctgtggctatgatggatatctgaatttgatatcaagtgataacttttcagtt
attaaaaaattcaaaaatgttgacaaattaatgtgttgtgacatctcttctgatagtaaa
acaatcattactggcggctgggacaggtcggttaaaatttatcacacggaactctaa

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