Brettanomyces bruxellensis: BRETT_000306
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Entry
BRETT_000306 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
BRETT_000306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbrx03021
]
BRETT_000306
03019 Messenger RNA biogenesis [BR:
bbrx03019
]
BRETT_000306
Transcription machinery [BR:
bbrx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
BRETT_000306
Messenger RNA biogenesis [BR:
bbrx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
BRETT_000306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pcf11_C
CID
Pfc11_Clp1_ID
zf_PCFS4
VHS
YbcO
Motif
Other DBs
NCBI-GeneID:
64572231
NCBI-ProteinID:
XP_041137089
UniProt:
A0A871R5M9
LinkDB
All DBs
Position
8:194987..196759
Genome browser
AA seq
590 aa
AA seq
DB search
MDTDTSPEQIGKDYYDALSSLTMNSRPIIESLTTLAQENTEAASEITKAVEKRINKAIPT
QKLYAFYLLDSICKNVGVPYPSLFGSNIFKLFTQAYSLVDDPTRVKLIRLFKTWKIPNAV
TGLALFDEDQIELVDKFLIKATACNRPPEEQRQIDISSGKATKTSLLREIDDLTNLVNSR
LLQMPNDAKGKERYQLLKQLRRIIGNPSPIPQKQLDFTKKQLQSIREDEVMRMDAFRKKQ
QLRQQQQQREQARQQQQQQQQQQLPQFSTDQLQGLLNLRTRPDNRQMAHPEHQQGMQSQG
QFNNANAQALFSMMNTLLSQSQGQPVQSRHVPAPNSVHSGNNAGNQASALGLKNLEFLKD
ILRKSKGQKVEDSGKRAAGNAHGSNPGGGNMNVSQNEPKAVILARFELKQNFISKHKPTA
SEVALIYSAKSNQCSNCSKRFATDSEGAKEKALHLDWHFRTNKKLKTLSKQIHNRTWFLP
EKEWEEFQEDEIVGAVDDNYELGVQMNNRVNEKKTLTEEEMNKHVVMIPDDSDNEVLCGI
CRDKIVGVFDDDSGEWVWRNAVKQRGRIYHYSCWIETKGQGERDRSPERR
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggatacagacacatctcctgaacagatcgggaaagattactatgatgctctttcgagc
ctcacgatgaactcaaggccaattatagagagtctaacgacgctggcacaggagaatacg
gaagctgcatcggagatcacgaaagctgtggaaaaaagaatcaataaagccatcccaact
cagaaactctatgcattctacttactagactccatctgcaagaacgtcggagttccgtac
ccatcactttttggatcgaacatattcaaactcttcacgcaggcgtattctttggttgac
gatccaacgagggtgaagctaatacgcttgtttaagacgtggaagataccgaatgcagta
actggtcttgctcttttcgatgaggatcagatagagctcgtcgacaagttccttatcaaa
gcaacggcatgcaatagacctcccgaggagcaaagacagattgatatttcgagcggaaag
gccacaaagactagccttctacgtgaaatagatgatcttaccaatctagtcaattcccga
ctgctacagatgcccaacgatgcaaagggcaaggagagataccagctattaaagcagttg
aggcggataatcgggaacccgtcgccgattccacagaagcagcttgattttacgaaaaaa
cagctacagtcaattcgcgaggacgaggtgatgcggatggatgcatttaggaaaaagcag
caactaagacaacagcagcaacaacgggagcaggcacgtcagcaacagcagcaacaacaa
caacagcagttgccacaattcagcacagaccagcttcaagggcttctgaacttgcgaacg
aggccagataacagacagatggcgcatccagaacatcagcaaggcatgcaaagccagggc
cagttcaacaatgcgaatgcacaggcactattcagcatgatgaacacgcttttgagccaa
agccagggccaaccagtgcagtcacgccatgttccagcaccaaatagtgtgcattcaggt
aacaatgccggaaaccaggcgtcagccttggggttgaagaacctcgagtttctcaaagac
atcctgcggaagtcaaaaggccagaaagtcgaagattccgggaagcgcgcggctggaaat
gcacacgggtcgaaccccggcggtggcaatatgaatgtgtcgcagaacgagccgaaagcg
gtgatattggcacggtttgagttgaagcagaacttcatcagcaaacataagccaacggcc
tcggaggttgcattaatatattctgccaagagcaaccagtgctcgaattgctcgaagagg
ttcgcaactgatagcgagggagccaaggagaaggcactacatctagactggcatttcaga
acgaacaaaaagctcaagacactctcgaagcagattcacaaccggacgtggttcttgccc
gaaaaggagtgggaagagttccaggaggatgagattgtgggcgcggtggatgataactac
gagcttggggtgcagatgaacaaccgcgtgaatgaaaagaagactttaacggaggaagag
atgaacaagcatgtggtgatgatcccggacgactcggacaatgaggtgttgtgtgggata
tgccgggataagatcgtgggggtgtttgatgatgatagtggcgagtgggtgtggaggaat
gctgtgaagcagaggggacggatataccactacagctgctggattgagactaagggacag
ggggagcgtgaccggtcgcccgagagaagatga
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