Brettanomyces bruxellensis: BRETT_000385 Help Entry BRETT_000385      CDS       T07183                                  Name (RefSeq) uncharacterized protein   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism bbrx  Brettanomyces bruxellensis Pathway bbrx03018   RNA degradation Brite KEGG Orthology (KO) [BR:bbrx00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     BRETT_000385  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:bbrx03019]     BRETT_000385 Enzymes [BR:bbrx01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      BRETT_000385 Messenger RNA biogenesis [BR:bbrx03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      BRETT_000385   mRNA degradation factors    3'-5' decay     Ski complex      BRETT_000385 SSDB OrthologParalogGFIT Motif Pfam:  DSHCT DEAD Ski2_N ResIII Helicase_C DEXQc_Suv3 MTR4-like_stalk Ski2_beta-barrel Motif Other DBs NCBI-GeneID:  64572310 NCBI-ProteinID:  XP_041137167 UniProt:  A0A871R7J3 LinkDB All DBs Position 8:complement(398146..402018) Genome browser AA seq 1290 aa AA seqDB search MAESLEEILGSLRQISLSKTKYEDQPIVPSTKTKFKVEEETEESVNESIEDRYLSPKNVL PWDLLDEFQTVPEVDGDRKNSFYRSLMADPVLTDRTQIQSRREGIAGSVVSYEEKFDRKL ATSSLLASASSSMNRRYVSGGTSFNGVIKGTPFMETGEMEKQQAERAAKATRHLHRDEHG LFDVPEGFERGLKLEREQPQAEIADELAKEGGMGDEKAGKELKGDETAENEPLESDAEDT SNDEDELFQPDGDGSSSASDTEGEKLDLEISRIIPSGTIVRPKQIPDSSGTAFSGGMERK EWAHVVSLDRKIENFEELVPHPARTWPFKLDTFQQEAIYHLEQGDSVFVAAHTSAGKTVV AEYAIAMAQRNMTKAIYTSPIKALSNQKFRDFKGSFDGMEVGVITGDVQINPDANCLIMT TEILRSMLYRGADTLRDVEFVIFDEVHYVNDVDRGVVWEEVLIMLPPHIKVILLSATVPN TYEFASWVGRTRRQDIYVISTPKRPVPLEVYLWARDRPYKVIDANRKFLEKGFAEHSRAL LMGKSSGGDRGGRGGRGGARGGRGGRGGRGGARGARGGARGGARGVSRGGASGRPGRSYN GPTKNTWPTVVNYLRKNTLLPAVVFVFSKRKCEEYADSLSGINFCSAKEASEIHMFIDKA VSRLKREDRELPQIMRMRDMLKRGIGVHHGGLLPIVKEVVEILFSKSLIKVLFATETFAV GLNLPTRTVVFSSIRKHDNVSFRYLLPGEFTQMSGRAGRRGIDTKGTAIIMSYTEPFTRK VLKDTTLGTPTKLSSQFRLTYTMILNLLRIEALKVEDMIKRSFGENASQMMIPEQQTEIL KLQKELEDRYKVTMDVEVYKKLEAFCRVNNRYAETYQRLIRALDSSKQLFMLFRANRLVV YRDADGISMPAIVTHLFGKDGTVTCILFRKRGKEGGPGREMNFSFNPALGASFNESHFVD WSRMHKVYVGKISVSSIVFISDRTFDFRIPNIPPKLQSRFFEALKQRFLWREVDWTKPMI PQTIELVTEHEQQLKQLIDMLQNRELVQLVDRKKDYRFVCDRIEVLDRIESLKKSMSGGN LDLLPEYEQRLEVLKVLGYVNPGELTVTLKGRVACEINCGWELPITELIFDNFLGDFTAE EIVALISCFAYSGRHRENEEPDPVKLSTPRLDRGYQKISKIMQSLTEIYEQKRITMTSEE ETFLECNRFGLVNTVYEWARGQSFKEIMLNANEADESEGTIVRVITSLDEICRQVKNAAL IIGDSDLHAKMSDAQERIKRDIVFCASLYL NT seq 3873 nt NT seq  +upstreamnt  +downstreamnt atggcagaatcattagaagagatattgggcagtcttcggcagataagcctgagcaagacc aagtacgaagatcagccaattgtgccgagtactaaaaccaagttcaaagttgaagaagaa acagaggagagtgtgaatgaaagcatcgaggatcggtacctcagccccaaaaatgtgctt ccgtgggatcttttggatgaattccagaccgttccggaagtggatggcgacagaaagaac tcgttttaccgctcattgatggcagatcctgtattgacagatcggacacagatccagtct agaagggaaggaatcgcgggatcggtcgtttcatatgaagagaagttcgacaggaagttg gccacatcgtctttgttggcctctgcatcgtcttcgatgaacaggcggtatgtttcaggc gggacgagtttcaatggagtgattaaaggcacaccatttatggaaacgggcgagatggag aagcagcaggcagagagggcggcaaaggccaccaggcatctccaccgggatgagcacggg ttgttcgatgtgccggaggggtttgagcggggcttaaagctggaaagagagcagccacag gcggaaatagcggatgagttggctaaggaggggggtatgggagatgagaaggcaggaaag gagcttaaaggagatgaaacagcagaaaatgaacctcttgaaagtgatgcagaagacacc agcaatgatgaagatgagcttttccagccggacggagacgggtcgtcgtccgctagcgac acagagggggagaagctcgatttggagatatcgcggatcatcccaagcggaaccatcgtg agaccaaagcagattccggattcgtcgggtacggcattttccggcggaatggagaggaaa gaatgggcacatgttgtgtcgttggaccggaaaatcgaaaacttcgaggagctcgttccg catccggctcgcacttggccatttaagctggacacgtttcagcaagaggccatttaccat ttggagcagggtgactcggttttcgtcgcggcccacacatcggcgggaaaaacagtggtt gcagagtatgcgatcgcgatggcacagagaaatatgaccaaggcgatatacacgtcacca atcaaggcgttgagcaaccagaaattccgggatttcaagggcagctttgacgggatggag gtgggagtgatcacgggagatgttcagatcaacccggatgccaactgcttgattatgacg acggagattttgagatcgatgctatatcggggcgccgacactctcagagacgtggagttt gtgattttcgatgaggtgcactacgtgaacgatgtagacaggggtgtggtgtgggaggag gttctcatcatgcttcccccgcacattaaggtgatcctgctttctgccaccgttccgaac acgtacgagtttgcatcctgggtgggcaggactaggagacaggatatatacgtgatatcg actccaaagcggcctgttccgcttgaggtgtatctctgggcccgggacagaccgtacaag gtgattgatgcgaaccggaagtttctcgagaaggggtttgcggagcacagccgggcgttg ttgatggggaagagtagtggaggagatagaggggggagagggggaagaggaggtgcaagg ggtggaagaggtggaagaggtggaagaggaggtgcaaggggtgcaagaggaggtgcaaga ggaggtgcaaggggtgtatctcgtggtggagcatcagggagacccggcagatcatacaac ggccccacaaagaacacatggccaacagtggtgaactacttgcggaaaaatacgcttctt ccagcggtggttttcgtgttttccaagcggaaatgcgaggagtatgcggactcgttgagt ggaatcaacttctgctcggcaaaagaagcttccgagatccacatgttcatcgataaagct gtttcgaggttgaaaagggaggaccgggagcttccgcagatcatgaggatgagagacatg ttgaagagaggaatcggtgtccatcacggaggactcttgccgattgtgaaggaggtggtg gagatattgttctcaaagtcactcatcaaggttttgtttgcaactgagacgtttgccgtg ggtctaaacctcccaaccaggacagttgtgttcagttcgatcaggaaacacgacaacgtg agcttccggtaccttctgcccggtgaatttacgcagatgtcgggccgtgcgggaagaagg ggcatcgacaccaagggcacggcaataatcatgtcgtacacagagccgtttacccgcaaa gtgctcaaggacacgacactcggcacaccgacaaagctctcgtcacagttccggttgacg tacacgatgatcttgaatcttctccggatcgaggccttgaaggtggaggacatgatcaag cggtcgtttggtgaaaacgcgtcgcagatgatgatcccggagcagcagacggagatcttg aagttacagaaggagcttgaggaccggtacaaggtgacgatggatgtcgaagtgtacaag aagctcgaggcgttctgccgggtcaacaaccggtatgcggagacgtaccagcggttgatc cgtgccctggactcgtccaagcagcttttcatgcttttccgtgccaaccggctcgttgtt taccgggatgccgacgggatctcgatgccggccattgtaacacacttgtttggcaaggac ggcacggtgacctgcattctgttccggaaacgcggcaaggaaggtggtccgggccgggag atgaacttcagcttcaatccggcactcggagccagcttcaacgagtcgcacttcgtcgat tggtcgcggatgcacaaggtgtacgtcggaaagatatcagtgagcagcattgtgttcatc agtgaccggactttcgacttccggatccccaacatcccgccaaagctgcagtcgaggttc ttcgaggccttgaagcagcgattcctatggagagaggtcgactggaccaagccgatgatc ccgcagacgatcgagttggtcacggagcacgagcagcagctcaaacagctcattgacatg ctgcagaaccgcgagctcgtccagctcgtggacagaaagaaggactatcggtttgtgtgc gaccggatcgaagtcttggaccgtatcgagagcttgaagaagtccatgagtggtgggaac ctcgatctcttgcccgagtacgagcagaggcttgaagtgttgaaagttctcggctatgtg aacccgggagagctcactgtcacactcaagggacgtgtggcctgcgagatcaactgtggc tgggagttgccgatcactgagctcatctttgacaatttcctcggtgactttactgctgag gagatcgttgcgttgatctcgtgctttgcctattcgggacggcacagagagaacgaggag cccgatccggtcaagctttccaccccccgtctcgatcggggctaccagaagatctcgaaa atcatgcagtcattaactgagatctacgagcagaagcgcatcaccatgacctccgaggag gagacctttttggagtgcaaccggttcggattggtcaacactgtgtacgaatgggccagg ggccagtccttcaaggaaatcatgcttaatgcaaacgaggccgacgagtctgagggcact atagtcagggttatcacctccttggacgagatatgccggcaggtgaagaacgccgctttg attatcggagattcggacctccatgccaagatgtctgacgcccaggagaggatcaagcgt gatattgtgttctgtgcctcgctatacttgtga

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