Brettanomyces bruxellensis: BRETT_000492
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Entry
BRETT_000492 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03022
Basal transcription factors
bbrx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BRETT_000492
09124 Replication and repair
03420 Nucleotide excision repair
BRETT_000492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbrx03021
]
BRETT_000492
03400 DNA repair and recombination proteins [BR:
bbrx03400
]
BRETT_000492
Transcription machinery [BR:
bbrx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BRETT_000492
DNA repair and recombination proteins [BR:
bbrx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BRETT_000492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
RRM_3
FlxA
DUF7089
Motif
Other DBs
NCBI-GeneID:
64572417
NCBI-ProteinID:
XP_041137271
UniProt:
A0A871RAG7
LinkDB
All DBs
Position
8:666185..668140
Genome browser
AA seq
651 aa
AA seq
DB search
MPATVSGTAFHHRKAGIVTILEDAEPPKVVWKCVDTDASHSVVSIPLDKIVSLQATPAKI
QKMMLKIGLKDEHGSESDGKKQKKHKNSVIFSFNNRVTMDNIKLTLQQVIARKKTSKEME
ASRSETPDNEFGTSEYGENVDNDELLTNLLDSKKLLKNFTLQQKLLRENSDLMKTFTEAV
IKSGLEPEEFWSSRIHLLRSYAVQHSQKRGPYNVLSTIKPVASSENEVNVSVTREKIHEI
FKQYPIVRKAYDDNVPKISEGEFWSRFFSSKLFRKLRGEKINLYDRGDITLDKYLYYDPD
YDGEEEDEDVDKLLEDQEAKETDRHKEKGRSKKRRASDLQITAAKKKVKLFNGEDEKISK
CIDILGNEADDAGLLGNKPDITMKKDQDPDLVNIMRTMNRLSRRMMSNIKENPRKKNANP
DDEFKHELEIKDLDHKETVDYNKLNYTQRSNVSSSIVPPELVKQAMTQSDLNPKLNDYDA
SMQMFKGQFNEAEKLDLTSVYFQIKKSIYDSYKDVISIVRKNSKQSSQSWSLDNDNLSTG
WKDARSEISKDRLESLRLTQSTSIEFLRHFWIHFNSISTSSISTNSHFKKELIQLRKSFF
SITKCLERVTANLNQSEGEERTKEEEIMHPLIESLKRALQKYEDAIIEPKR
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaacagtttcggggacagcctttcatcacagaaaggcgggtatagttaccata
ttggaggatgcagaaccaccaaaagtggtgtggaagtgcgtggatactgatgcaagtcat
tccgtggtgagtattccgcttgataagattgttagtttgcaggcgaccccggccaaaatc
caaaagatgatgctgaagataggacttaaggatgagcatggctcagagagtgatggcaaa
aagcaaaagaagcacaagaacagtgtgattttcagcttcaacaacagggtcactatggat
aatataaagctgactttgcagcaagtgattgcaagaaagaaaaccagcaaggaaatggaa
gcaagcagatcagagacaccagataacgagtttggcacatcggaatacggcgaaaatgtt
gataatgatgagcttttgaccaatctgttggactcaaagaagctcctcaagaatttcact
cttcaacagaagcttttaagggagaactcggatttaatgaagacttttacagaggccgtg
attaaaagtggtttagagcctgaagaattctggtcaagcagaatccatcttttgcgatca
tacgcagtccaacacagtcagaaaaggggaccatacaatgttctcagtacaattaaacct
gttgcctccagtgaaaacgaagttaatgttagtgtgacgcgcgagaaaatacatgagatt
ttcaagcagtatccgatagtccgaaaagcgtatgatgacaatgttcccaagataagtgag
ggggagttctggtcccgattcttttcctcgaagctctttcgtaagttgaggggagaaaag
ataaacttgtacgatcgtggtgatatcaccttggataagtatttgtactacgatcccgac
tacgatggagaggaggaggatgaggatgtggataaattgttagaggatcaggaggcaaag
gaaacagacagacataaggaaaaaggacgatcgaagaaaagaagagcttccgatctacag
atcactgcagctaaaaagaaggtgaaacttttcaacggtgaggatgagaagatctccaaa
tgcattgatatcctcggaaacgaggctgatgatgctggattattgggaaacaagccggat
attaccatgaagaaggatcaggacccagaccttgtgaatattatgaggaccatgaatagg
ttaagcagacgtatgatgtcaaacatcaaggagaatccaaggaagaaaaatgcaaaccca
gacgatgagttcaagcatgaattggaaataaaggaccttgaccacaaggaaactgtggat
tacaataagttgaattacacacagcggtcaaacgtttcttccagtatcgttcctcccgaa
cttgtgaagcaggccatgactcaatccgacttgaatcccaagttaaatgattacgatgca
tccatgcagatgttcaaaggccagtttaatgaggccgagaagctcgacttgacatcggtg
tactttcagattaaaaagtcgatatatgactcttataaggatgtgatcagtattgtgaga
aagaattccaagcagtcaagtcaatcctggagtcttgacaacgacaacttgagtactgga
tggaaggatgctcgtagtgaaatttcaaaggatagattagaaagtctccggcttacccag
tcaacatctattgaattcctccgtcatttttggattcacttcaattccatctcaacttca
tctatctcgacaaattctcacttcaagaaggaactgatacagctgcgaaaatcatttttc
agcatcaccaagtgtcttgaaagagtaactgcgaacctgaatcaatctgagggtgaagaa
cgtaccaaggaggaagaaatcatgcatccattgatagaatctctaaaaagggcactacaa
aaatacgaagatgccatcatcgaacccaagcgctag
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