Brettanomyces bruxellensis: BRETT_000578
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Entry
BRETT_000578 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K14315
nucleoporin NDC1
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
BRETT_000578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbrx03019
]
BRETT_000578
Messenger RNA biogenesis [BR:
bbrx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
BRETT_000578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
64572503
NCBI-ProteinID:
XP_041137357
UniProt:
A0A871R835
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Position
8:865687..867729
Genome browser
AA seq
680 aa
AA seq
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MSQTTLSGRYGIGRNERNQLGSTSWSPSGVLFRSNDSQHVPLKKGNTLSSKKGNLPSAHK
TKLKKRKPTYATYFHKVFKIRMRYYYRLSLLLSILLSILIALPYGGNIFMLPVKIMILWA
SFCLLKIARDATIRVSLSGASSEFQHIVSCLFSTHFLIVFGCYAVATGSIFLIIYNQSSA
YLNYSISSPTKTVKPFLNDSFMFFWYFSMFVSSFYSLQFIIFEKNMLPFKIGVYRCDPTD
YLKNIKWSSLLKEATAIAGCIAIFAAPVYFWFRRLIFNVFFSGLVYGTNLNSQIPAIRFS
IIYYLWLCILSFAIVFTYELLNRIYNAYAMVGCLIVKKPISSYGDNQFDVLTTGITDYEY
PLVRLTAYQELVYRSLCTNISERRCLYEDSRWLLVLNEAAKLIRSNSKVIKMDILPKKAS
VKSKIPENNSAPNDDTPNIFGRSGQINIDTGNDFDKANLRSRRSMFSTNINSPEDLFLKH
DSPHKPVIPKKKQSLVSIVVKKCEAYILSLVRKFGKQLKEYILNQRKKSVFLQKVDRFIT
KDKMIWGSYRKEADRRIPDKIIVGNAIIVISEMLLHAKSEDKKNRVESTLTEVLTILTSI
YKSTSLFLDHPPVAPKSIKEKEHNSIKEINDLAISYFFKIVVFYNSSLNDLILGPDTFKL
AKWCTDMALEEQKSRGFTEI
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaacaacgcttagtgggaggtacggcattggtagaaatgaaagaaatcaattg
ggctcaacgtcctggtctccctcaggagtattgtttagatcgaatgattcacaacatgta
ccattgaaaaaaggaaatactctttcatcaaagaagggtaacttgccttctgcacataag
acgaaattaaaaaaaagaaagccgacgtatgcaacatattttcacaaggtgttcaagatc
cgaatgagatactattacaggctttcgcttcttctttcaatacttctttctattctcatt
gcattaccctatggaggaaatattttcatgctaccagtaaaaattatgatactatgggct
tcattttgtttgctcaaaattgcaagggatgccacaatcagggtttctttatcaggcgca
tcttcggagtttcaacacattgtttcatgtcttttttctacacacttcctcatcgttttt
ggctgttatgcagttgccacaggtagcatcttcctcattatctataatcaatcttcggcg
tacctaaattacagcatatcatctcctacaaaaacggtcaaaccattcctcaatgatagt
ttcatgtttttctggtatttctccatgtttgtttcgtcattctactctttacagtttatc
atttttgaaaagaacatgctacctttcaagattggtgtttatagatgcgacccaaccgac
tatttgaagaatattaaatggagttccttgcttaaagaggctacagctatagccggttgc
attgcgatatttgcggcaccagtctacttctggtttagaaggctcatattcaatgttttc
ttttctggattagtgtacggtacaaacttaaacagtcaaattccggcaatcaggttttcc
ataatttactatttatggctttgcattttgagctttgcaattgtttttacatacgagtta
ttgaaccgaatctacaatgcatatgccatggtcggatgtcttatagtcaaaaagcctata
agttcatatggcgataatcaatttgatgttctcacaactggaatcacagactatgagtat
ccattagtcagattgaccgcttaccaagaactagtttacagatccctctgcacgaatata
agcgagagaagatgcttatatgaggactctcggtggttacttgttcttaacgaggccgct
aagcttataagatcgaactctaaggtcataaaaatggacattttgccaaaaaaggcttct
gtgaagtccaaaattcccgaaaataattcagcaccaaatgatgatacaccaaatatattt
ggaagatctgggcagataaacatcgatactggaaatgattttgataaggctaatttgagg
tcaagacgaagcatgttttcgacaaatattaatagtcctgaagatttgtttcttaagcac
gattcaccacataaaccagttatacctaagaaaaagcagagcttggtttctatcgttgtg
aagaaatgtgaagcgtacatcttgtcattagtgcgtaaatttggaaagcagttaaaagaa
tatattctaaaccaacgaaagaagagtgtgtttttgcaaaaggtggatcgatttattact
aaagataaaatgatttggggatcgtaccgaaaagaagcagacagaagaattccagacaag
atcattgttggtaatgcgataattgtgatttctgagatgttacttcatgccaaaagtgag
gacaagaagaacagagtcgaaagtacattaacggaggtgcttacaatattgactagcata
tataagtcgacatcattatttttggatcatcctccagttgctcctaaaagtataaaagaa
aaggagcacaatagtattaaggaaatcaacgatttagcgatttcctactttttcaagata
gttgtcttttacaactcttctttaaatgatctcatattgggaccagatacatttaagtta
gctaagtggtgtacggatatggcacttgaagagcaaaagtcccggggctttacagaaata
tga
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