Brettanomyces bruxellensis: BRETT_000629
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Entry
BRETT_000629 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K10841
DNA excision repair protein ERCC-6
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BRETT_000629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbrx03036
]
BRETT_000629
03400 DNA repair and recombination proteins [BR:
bbrx03400
]
BRETT_000629
Chromosome and associated proteins [BR:
bbrx03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
BRETT_000629
DNA repair and recombination proteins [BR:
bbrx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
BRETT_000629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
64572554
NCBI-ProteinID:
XP_041137408
LinkDB
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Position
8:1009639..1013370
Genome browser
AA seq
1243 aa
AA seq
DB search
MPEKKGEKQEEFFHLPTQDEVASSEKASDVDPQRSGNADGDSVSKADAKETDLGQVTSKA
ASDSVEDNSEEPVSLQSLGVKFIEQNSLERSVAEQADKVMAEKDVELEQKRLDKALKKLK
KLETEVDRLRTKIDFGTGRISQKEALRRRAEKIESSDILQASTDVKEITERLRRAQSIVK
DQKDIITESDESTVENTALSSGQKSRRLLDETQQEYLMRIGKITAFGSKNRFIEEVGDGE
DENLASSHQNLKRPGLESLEMETAQGENGKQENDNSGKILGKRKRRKVIPIDDDDEYMEP
SDDGELVNSSDEDEDDYYTEENVEESDIDDVDVSVPAKKKTPEEEFKNIDDGDEKLYQKR
VKEWINTRSRLRALKRPNYVNDSDKPEWEKPHPTANDGILNDEFRIPGDIYPSLFDYQKT
GVQWLWELYSQKTGGIIGDEMGLGKTIQVIAFLAGLQYSGKLKKPVLVVCPATVLRQWCN
EFHRWWPAFRVMILHSIGSGMSGMSKKRRSQLRDEESWEEDLELEEHQSHRSAHSIMNEQ
NARELVHRAVSKGHVIITTYVGVRIYAKYLLPVHWQYAVLDEGHKIRNPDSYITLTCKQI
RTSNRIILSGTPIQNNLVELWSLFDFIFPGRLGTLPVFQKQFCIPINLGGYANATNVQVQ
AGYKCAVILKDLISPYLLRRVKADVAQDLPKKSEMVLFCNLTKRQRVLYQSFLHSEDIER
ILKGKRNALYGIDILRKICNHPDLVEGKIIDGKRETGTKDSKKESSRTLAEKSGKMQVVS
KLLQLWQKENRKALIFTQTRQMLNIMEHYMEVLNRETNNTFGYLRMDGTTPIGERQKLVD
SFNTDPKYQVFLLTTRVGGLGVNLTGASRVIIYDPDWNPSTDIQARERAWRLGQKKDVTI
YRLMIAGTIEEKIYHRQIFKQFLTNKVLKDPKQKRFFKMTDMYDLFTLGDQDTKGTDTAD
LFGARETNYSGTKERKSKYLSGVNARRRTSSPDDISEDNGDSDDFMKVSKMRGVASIQKY
DTGEGSKSKGNDDDSRLVSQIFKASGVHSAIRHDAVLNSGGEGSNTVNTIEREAERIAKD
AVSALRESRKAARKSGVSVPTWTGRHGAAGRMARKPLMNTRKKIPGAVLGLHIYRGRSGL
SSASLLQSMKKRQNSSGTLKRIVKAPQKDISSSSNENTEKLIYNLSNYMSGLDGCFSTSS
DILDHLNVDISNEKDVRVLRSMLRTICKWDKVRKGWVLGKEFR
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaagaagggggaaaagcaagaagagttttttcatcttcccacccaggatgaa
gttgccagctccgaaaaagcttcagatgtcgatcctcaaagatcgggtaatgctgatggg
gattcggtatcgaaagccgatgcaaaagagactgatttaggccaagtgacatcaaaagca
gcttctgactctgtggaagacaatagtgaagaacccgtttctcttcaatccttgggagtg
aaattcatagaacaaaattctttggagcggtctgttgccgagcaggcagacaaggtaatg
gctgaaaaggatgttgagctcgagcaaaaacgactagataaggccttaaagaaactcaag
aaacttgagactgaggttgatcgacttcgtacgaagattgattttggaacaggacggata
tcgcagaaagaagcacttcgaaggcgtgcggaaaaaatagaaagttccgatattcttcag
gcatccacagatgtcaaggaaataactgaacggctaagaagagcacagtcgattgtaaag
gatcagaaagatatcatcacggagtcggacgaatccacagttgagaatacagctttgtcc
tcgggccagaagtccagaagactgctagatgagactcagcaggagtatctcatgagaatc
ggtaagattactgcatttggaagcaagaacagatttattgaggaggttggggatggagag
gatgaaaatctagcttcgtctcatcagaatcttaaacggccgggattggaaagtctcgaa
atggaaactgcccaaggggagaatggtaaacaggaaaacgataattccgggaagatttta
ggtaaacgtaaaagaagaaaggtgataccgatagatgatgatgatgagtatatggagcca
tctgatgatggagaactagtgaatagtagtgatgaagatgaagatgattattacacggag
gaaaatgttgaggagtcggatatcgatgatgtcgatgtatctgttccggcaaagaagaaa
actccggaggaggaatttaaaaacatagatgacggagatgagaagctttaccagaagcgt
gtgaaagagtggataaatacgagatcacgactcagagcattaaaacgtccaaattatgtt
aatgattccgacaaaccagagtgggagaagccacatccgactgccaatgatggaattctc
aatgatgagtttcggattcccggtgatatttatccatcgttgttcgactaccagaaaacc
ggtgttcagtggttgtgggagttgtacagtcagaaaacaggcggtattattggtgatgag
atgggtttgggaaaaacaattcaggtgatagcttttcttgccggcttgcaatacagtggg
aagttaaagaagccggtattggttgtttgtcccgctactgtgcttcgtcaatggtgtaat
gaatttcatcgttggtggccggctttcagggtgatgattctacactcaattggcagtgga
atgagtggaatgtcaaagaaaagacgcagccaattacgcgatgaggaaagctgggaggaa
gatcttgagttggaagagcatcaaagccatagatcggcacacagcataatgaatgaacaa
aatgcacgggaattggtgcacagagctgtttccaagggtcatgtgattattaccacgtac
gttggggtcagaatatatgcgaagtaccttcttcctgtgcattggcagtatgctgtgctt
gatgaaggccataagatcagaaatccagacagctacattactcttacatgcaaacagatt
agaacctccaacagaatcattcttagtggaacgccaattcaaaataacttggtggaactc
tggagtttatttgacttcatattccctggccggcttggtacattgccggtattccaaaag
cagttttgtattcccattaacctaggtggatatgccaatgccaccaacgttcaggtgcaa
gccggctataagtgtgcagtcatacttaaggatctcatatctccttatctgctacgtcgt
gttaaagctgatgtggctcaggatttgcctaagaaatccgagatggtactcttttgcaat
ctcacaaaacgtcagagggtgttgtaccaaagttttctacactccgaagatatcgaacgc
atattgaaggggaaacgaaatgctctttacggaattgatatcttacggaagatttgcaac
catccagacttggtcgagggcaagattatagacggcaaaagggaaaccgggactaaggat
agtaaaaaagagtcttcaaggacacttgcagagaaatctggtaagatgcaggttgttagc
aaattgcttcaactatggcagaaggaaaaccgcaaagctctcatatttacgcaaacacga
caaatgctgaatattatggagcattatatggaagtgttaaatagagagacaaacaatact
tttggatatcttcgaatggatggaaccactccgattggagagaggcaaaagttggtcgat
agctttaataccgacccaaaataccaggtgtttcttttgacaacacgggtcggaggtttg
ggtgtaaacttgactggtgccagtagggtgattatatatgatccagattggaatccatct
accgatatccaggcaagagaaagggcatggagattaggacagaaaaaggatgtgacaatt
tatagattgatgattgctggtacgatcgaggagaagatataccacagacaaatattcaag
cagtttctcaccaacaaggttttaaaggatccgaaacagaagaggttctttaagatgacg
gacatgtatgatttgtttacgttgggtgatcaggacacaaagggtacggatactgctgac
ttgtttggtgccagagagacaaactactctggtactaaagagaggaagtcgaagtattta
agtggggtgaatgcaaggcgtagaacttcttctcctgacgatatttcggaagataatggg
gactcggatgatttcatgaaggtttccaagatgaggggagttgccagtatacagaagtat
gatacaggagaaggttccaaatcgaaaggcaacgatgatgactcaaggcttgtttcgcaa
attttcaaagcatctggtgttcattcggcaattcggcatgacgcagtgcttaattcagga
ggtgagggatctaatactgtgaatactattgagcgagaagcagaaagaatcgcaaaggat
gcagttagtgctcttagggagtcaaggaaagcagcaagaaaaagtggagtttcagttcca
acatggacaggaagacatggagctgctggtaggatggcaagaaaaccgttgatgaatacc
agaaagaagatacccggtgcagttctaggccttcatatttaccgtggaagatctgggttg
tcatctgcttctcttctgcagagtatgaagaaaagacagaattcatctggaactttgaag
cggattgtaaaagctcctcagaaagacattagcagtagctccaacgagaacacggagaag
ctcatatacaatcttagtaactatatgtcaggcttggatggatgtttcagcacatcaagc
gacattctagatcatctaaatgttgacatatcgaatgagaaggatgtacgagttctccgt
tcgatgttaagaacaatttgcaagtgggataaagttagaaaggggtgggttctcgggaaa
gagtttagatag
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