Brettanomyces bruxellensis: BRETT_000792
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Entry
BRETT_000792 CDS
T07183
Symbol
RFC3
Name
(RefSeq) Subunit of heteropentameric Replication factor C (RF-C)
KO
K10756
replication factor C subunit 3/5
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03030
DNA replication
bbrx03410
Base excision repair
bbrx03420
Nucleotide excision repair
bbrx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BRETT_000792 (RFC3)
03410 Base excision repair
BRETT_000792 (RFC3)
03420 Nucleotide excision repair
BRETT_000792 (RFC3)
03430 Mismatch repair
BRETT_000792 (RFC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbrx03032
]
BRETT_000792 (RFC3)
03036 Chromosome and associated proteins [BR:
bbrx03036
]
BRETT_000792 (RFC3)
03400 DNA repair and recombination proteins [BR:
bbrx03400
]
BRETT_000792 (RFC3)
DNA replication proteins [BR:
bbrx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
BRETT_000792 (RFC3)
DNA Replication Termination Factors
ELG1-RFC complex
BRETT_000792 (RFC3)
Chromosome and associated proteins [BR:
bbrx03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
BRETT_000792 (RFC3)
DNA repair and recombination proteins [BR:
bbrx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
BRETT_000792 (RFC3)
Check point factors
HRAD17(Rad24)-RFC complex
BRETT_000792 (RFC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
AAA_lid_RFC1
AAA_assoc_2
Rad17
RCF1-5-like_lid
ResIII
AAA_22
RuvB_N
AAA_16
DEAD
AAA_11
DUF815
AAA_24
AAA_30
ATPase_2
Mg_chelatase
AAA_7
DNAX_ATPase_lid
Viral_helicase1
nSTAND3
nSTAND_NTPase5
AAA_5
AAA_3
bpMoxR
AAA_28
TIP49
AAA_18
nSTAND6
RNA_helicase
AAA_33
Thioredoxin_6
HMG-CoA_red
SLFN-g3_helicase
Zeta_toxin
AAA_2
Motif
Other DBs
NCBI-GeneID:
64572717
NCBI-ProteinID:
XP_041137567
LinkDB
All DBs
Position
8:1358722..1359714
Genome browser
AA seq
330 aa
AA seq
DB search
MPNRELHENLPWVEKYRPQNLDQVYGQQETIQTIRKFAQDGRIPHLLFYGPPGSGKTSTI
IALAREIYGKNYRNMVLELNASDDRGIDIVRDQIKNFASTRQIFSSGFKLVILDEADAMT
NTAQNALRRIIEKYTKNTRFCILANYAHKINPALMSRCTRFRFSPLAISAIEERVDTVIK
EEKLKIEKPAEKCLVTLSKGDMRKALNVLQACAAALDKPEDTISVDMIYECVGAPRPKSI
EVILNAIMERDWTDSYSVMNKIRKTEGLALIDLIEGFMDILAKYELKPLTRIKMIQGLGD
IEYGISKGGSDKIQSTAVIGCIKNALENEA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgccgaatagagagttgcatgaaaacttaccgtgggttgaaaagtaccgccctcaaaat
cttgaccaggtctatggtcaacaagaaactatccagactattagaaagtttgcccaagat
ggcagaattccacatcttctattttatggaccaccaggtagtggtaagacatctacaata
atagcattggcaagggaaatttatggaaagaattacagaaatatggttttagagttgaat
gcttctgatgatcgaggtattgatattgttagagatcaaataaagaacttcgccagcact
cggcagattttcagctctggattcaaactagtgatattagatgaagcagatgcaatgaca
aatacagcccaaaatgctttaaggaggatcatagagaaatacactaaaaacacgagattc
tgtattcttgcaaactatgcacataaaataaatcccgctttgatgtcacgttgtacaaga
ttcagattctctccgttagctatatcggcaatagaagaaagggttgacactgtcattaaa
gaggagaagctcaaaatcgaaaagccagctgaaaaatgcctcgttacactcagtaaaggt
gatatgagaaaggctttgaatgttttacaagcttgtgcggcagcattggataagcctgag
gatactataagcgttgacatgatttacgaatgtgttggtgctcccagacctaagtctata
gaagtgatattaaatgcaataatggaacgagattggacagattcatactccgtcatgaat
aaaatccgtaagactgaggggcttgcacttattgatttaattgaaggatttatggatatc
cttgcaaaatatgagctcaaaccgctcactagaataaaaatgattcagggtctcggtgat
atagaatatggcatttccaaaggtggaagtgataagattcaaagtacagctgtaattgga
tgtataaagaatgctttagagaatgaagcttga
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