Brettanomyces bruxellensis: BRETT_000842
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Entry
BRETT_000842 CDS
T07183
Symbol
HAS1
Name
(RefSeq) ATP-dependent RNA helicase
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
bbrx
Brettanomyces bruxellensis
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbrx03041
]
BRETT_000842 (HAS1)
03009 Ribosome biogenesis [BR:
bbrx03009
]
BRETT_000842 (HAS1)
Enzymes [BR:
bbrx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BRETT_000842 (HAS1)
Spliceosome [BR:
bbrx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
BRETT_000842 (HAS1)
Ribosome biogenesis [BR:
bbrx03009
]
Eukaryotic type
90S particles
Helicases
BRETT_000842 (HAS1)
Pre-60S particles
BRETT_000842 (HAS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
64572767
NCBI-ProteinID:
XP_041137616
UniProt:
A0A871R3N3
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All DBs
Position
8:1454505..1456190
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AA seq
561 aa
AA seq
DB search
MARTAVKRKSKGESQSTSKKPKVSTTNNSAEDSDTDKVVEKIDQEYSDVEKLLEKENNIK
ASKDTKDSKVGNAAAEVKNESSVTKPEKHDNDAVTTEKFSDLKMSEPTLQGIKDMGFTTM
TEVQSKTIPVLLTGKDVLGAAKTGSGKTLAFLIPAIELLYSLKFKPRNGTGAIVITPTRE
LALQIFGVARELMAHHSQTLGIVIGGANRRQEAEKLAKGVNLLIATPGRLLDHLQNTRGF
VFKNLRTLIFDEADRILEIGFEDEIRQIVKILPNEDRQTMLFSATQTTKVEDLARAALKK
APVYINVSERKEAATVSGLEQGYVVCESDQRFLLLFSFLKRNMRKKKIIVFFSSCNCVKY
FAELLNYIDIPALSLHGKQKQQKRTNTFFEFCNAKRGILLSTDVAARGLDIPDVDWIIQY
DPPDDPRDYIHRVGRTARGTKGKGKSLMFLIPQELGFLRYLKAAKVPLNEYEFPPSKIAN
IQSQLEKLIKNNYWLHQAAKDGYRAYLQAYASHHLKTVYKVDKLDLVKVGRSFGFSVPPK
VNITIGSSTSKPKSHKRKRYN
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaactgcagtcaagagaaagtctaagggtgagtcccagagtacctccaaaaag
ccaaaggtttccactaccaacaattcagcagaggattcagatactgataaagttgttgaa
aagattgatcaggagtattctgatgtggaaaaacttctagagaaagagaataatataaaa
gcaagcaaagataccaaagatagtaaggttggcaatgctgctgcagaggttaaaaatgaa
tctagtgtcacaaagccagaaaagcatgataacgatgctgtcacaactgagaaattttca
gatctaaagatgtcagagccaacactgcaaggtatcaaggatatgggttttaccacaatg
acagaggttcagtctaagactattccggtgttacttacaggtaaagatgttttaggtgcc
gccaagactggatctggaaaaactttggccttcctaatacctgctattgaattgttgtat
tccttgaagtttaagccaagaaatggaacaggagctattgttattactccaacaagggag
ttggctcttcaaatatttggtgtcgctcgtgaattaatggcacatcattcgcagacattg
ggaattgtcataggtggtgccaacagaagacaggaggctgaaaaattagcaaagggtgtc
aaccttttgattgcaacccctggtagattgttggatcatttgcaaaatactagaggtttc
gtgttcaagaatttgagaactcttatttttgacgaggccgatcgtatcttggaaattggt
ttcgaggatgaaatccgacaaattgtcaagattctcccaaacgaagatcgtcagactatg
cttttctctgcaacacagacgactaaagttgaggacttggctcgtgctgctttgaaaaaa
gctcctgtgtacattaatgtgagtgaaagaaaagaagccgctactgtttctggtcttgag
caaggttatgttgtttgtgagtctgaccagcgttttctgttattgttctcgttcctcaaa
agaaatatgcgcaaaaagaagattatagtctttttttcgtcatgtaactgtgtgaaatac
tttgcagagcttttgaattatattgatattcccgctttatcgttgcatggcaagcaaaag
cagcaaaagcgtacaaacacattctttgagttttgcaatgcaaagcgtggcattttgctt
tcaacagatgtggctgcaagaggtttagatattccagacgttgattggattattcagtat
gatcctccagatgatccaagagactatattcatagagttggtaggactgctagaggtaca
aagggtaaaggtaaatctttaatgtttcttatacctcaagagttaggtttccttcgatat
ttgaaagccgcaaaagttccattgaatgaatatgagtttccaccaagtaagatagccaat
atacagtcacagttagagaagcttatcaagaataattattggcttcatcaagctgctaag
gacggttatagagcatatttacaagcatatgcatctcatcatttgaaaactgtgtacaag
gtcgataaattggatcttgtgaaagtgggacgctcgtttggattttctgtgccacctaaa
gttaacatcacaattgggtcaagcacatcaaagccaaagtcacacaagagaaagagatac
aattaa
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