Brettanomyces bruxellensis: BRETT_000925
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Entry
BRETT_000925 CDS
T07183
Symbol
PRP43_2
Name
(RefSeq) DEAH-box ATP-dependent RNA helicase prp43
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BRETT_000925 (PRP43_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbrx03041
]
BRETT_000925 (PRP43_2)
03009 Ribosome biogenesis [BR:
bbrx03009
]
BRETT_000925 (PRP43_2)
Enzymes [BR:
bbrx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BRETT_000925 (PRP43_2)
Spliceosome [BR:
bbrx03041
]
Complex A
U2 snRNP components
U2 related factors
BRETT_000925 (PRP43_2)
Complex B
BRETT_000925 (PRP43_2)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
BRETT_000925 (PRP43_2)
Ribosome biogenesis [BR:
bbrx03009
]
Eukaryotic type
90S particles
Helicases
BRETT_000925 (PRP43_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
64572850
NCBI-ProteinID:
XP_041137697
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All DBs
Position
8:1651297..1652835
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AA seq
512 aa
AA seq
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MSATLDAVKFQNYFNSAPLLAIPGRTYPVEIYYTPEFQRDYLDAAIRTVLQIHATEKEGD
ILLFLTGEDEIEQACDKIQLEADQLIREEGCGPLKVYPLYGSLPPYQQQKIFEPAPKPFK
SNGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQ
RAGRAGRTRPGKCFRLYTEEAFKKELVEQTYPEVLRSNLSSTVLELKKLGIDDLVHFDFM
DPPAPETMMRALEELNYLECLDDEGNLTPLGRMASHFPLDPMLAVMLIRSPKFHCSEEIL
TIVAMLSVPNVFVRPSGKNARREADDAKMQFANPEGDHLTLLNVFLEYKSSGAKAHGLRK
WCKDNYLSFRSLKSADNVRKQLSRIMGSYDLEFNSNDYGNTMDDTDIRKALTAGFFMQVA
KKKSTGKGYITVKDSQDVLLHPSTVLHRQPEWVIYNEFVLTSKNYIRTVTSVKPEWLLEF
APKYYDLENFHEDDVKLSLERVKERLDHAKKN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccactttagatgcagtgaaatttcaaaattatttcaacagtgctccgttgttg
gccattccaggacgtacgtacccggtcgaaatatactatactcctgaatttcagcgcgat
tatttagatgccgctatacgaactgtgttacaaattcatgccaccgagaaagaaggtgat
attcttttatttcttacgggtgaggatgagattgaacaggcttgtgacaaaatacagcta
gaggctgaccaacttatccgtgaagaagggtgcggcccactgaaagtatatccattgtat
ggttcattacctccatatcaacagcaaaaaatttttgagccggcaccaaaaccgttcaaa
tcaaatggaagacctggacgaaaggtgattgtctctacgaacattgcagagacatcgttg
actattgatggtattgtatacgttgtggatcctggttttagcaagcaaaaggtctataat
cctcgtattagagtggaatcacttttagtctctcctatttcgaaggcatccgcacaacaa
agagctggaagagctggtcgtactagaccgggtaaatgctttagattatatacggaagaa
gcatttaagaaggagttagtggaacagacatatccggaagtcttgcgctccaatttatca
tcaactgttttagaattgaaaaagttaggaattgacgatttggttcattttgacttcatg
gatcctccagccccagaaaccatgatgagagctttagaagagttgaattatcttgaatgc
ttggatgatgagggaaatttgactccacttggtcgtatggcatcgcattttcctttggat
cctatgcttgccgttatgcttatcaggtctccaaaattccactgttccgaggaaatttta
acaatcgtggcaatgctttcggtgccaaatgtgtttgtgagaccaagtggtaagaatgca
agaagagaagctgatgatgcaaagatgcaatttgcaaacccggagggagatcacctcact
ctgctaaatgtcttcctggagtacaagtcatcaggagctaaggcacatggcctcagaaaa
tggtgtaaagataactatctctctttcagatcattgaaaagtgcagacaatgtgaggaaa
cagctttccagaatcatgggctcttatgatctagagtttaacagtaatgattatggaaat
accatggatgatacagacatcagaaaggcgcttaccgcaggatttttcatgcaagttgca
aagaaaaagagcacaggtaaaggatatatcaccgttaaagattctcaggatgttctttta
catccatccactgtcttacatcgccagccagaatgggttatttataacgaatttgtctta
acatcgaaaaattacattcgaaccgttacaagtgttaaaccagagtggcttttggagttt
gctccaaaatactatgatttggagaatttccatgaggatgatgtgaaattgagtttagaa
agagtaaaagagagattggatcacgcgaagaagaactga
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