Brettanomyces bruxellensis: BRETT_000951
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Entry
BRETT_000951 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03008
Ribosome biogenesis in eukaryotes
bbrx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BRETT_000951
09123 Folding, sorting and degradation
03018 RNA degradation
BRETT_000951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbrx03021
]
BRETT_000951
03019 Messenger RNA biogenesis [BR:
bbrx03019
]
BRETT_000951
03009 Ribosome biogenesis [BR:
bbrx03009
]
BRETT_000951
03016 Transfer RNA biogenesis [BR:
bbrx03016
]
BRETT_000951
Transcription machinery [BR:
bbrx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
BRETT_000951
Messenger RNA biogenesis [BR:
bbrx03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
BRETT_000951
Ribosome biogenesis [BR:
bbrx03009
]
Eukaryotic type
Pre-60S particles
RNases
BRETT_000951
Transfer RNA biogenesis [BR:
bbrx03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
BRETT_000951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
64572876
NCBI-ProteinID:
XP_041137723
UniProt:
A0A871RGQ7
LinkDB
All DBs
Position
8:complement(1702483..1705560)
Genome browser
AA seq
1025 aa
AA seq
DB search
MGVPSLFRWLSRKYPKIISPVIEDDPVIVGGIEQPLDYSAPNPNGELDNLYLDMNGIVHP
CSHPENKPAPESEDEMMLAVFEYTNRVLNMARPRKLLMIAVDGVAPRAKMNQQRSRRFRS
ARDAEISNEERERKMEEMEGRGEVIDESIRHKKTWDSNAITPGTPFMDILAESLRFWVAY
KLANDPGWSKLQVIISDSSVPGEGEHKIMNFIRSQRSDPEYNPNTTHCIYGLDADLIFLS
LATHEPHFRVLREDVYAKDQLQRKLRNMDQFGIDQQTRNQIELIDKKKPFIWLHIGILRE
YLAVELSIPRLSFKFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRDSSIDTLVSIWKRIM
PRLKGYITCDGQLDLAGVEALLEELGRMEDTILYKKHEKDRRREDNYKRRKIEKDQRSLI
KNELLKTVSKGKDNAPIMPSQNMTLTNLNTGKMSGGLKMSNNEIVQNINTISKANSANQS
VADILRQNIANANLTQKDDAETKNYSSSEPIDASTTDDSRKRNTDSAFSSDTEESTSGAL
VDNNDDVIRMWEPGFRKRYYQAKFHTQDEEQLEQIRRNMVEGYVEGISWVLLYYYQGCPS
WNWYYPFHYAPFALDFKNLTDIDVTFERGEPFKPFEQLMSVLPAASKHNLPDVFGPLMCD
EDSEIIDFYPKEFQVDMNGAKMSWQGISLLPFIDEKRLLKAVRSKYGSLTPEEVERNTLK
HEILLIGRDNAHFKWFKTLYTDKNENNTNVDGPVLQFHGREAGLSGKVMPCQEFDPKGER
KFPLKATAGVNTEQYVDVPNNSYMELSYRMPPKAKGKSMLLNGYISHLLILTEQDKDNVR
HSHNRFYRGNHFEVPTNIDYSQYVGPYGKTEYSNRVGGYKSYLDMYKYNSDRYQQTQQFN
RYSGGPQNLGFGNQNGFGNYNSQTSGYNSGYNNQYGNRGYNQGNYNYGYNPHGNANEQYN
NGYNQGYGRGGYNQRRSYGNSGRGRGRGDYAGNRYRNDYSNHESSYPNRENEYGDHHNNR
YNDRY
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcccgtcacttttcagatggctatctcgaaagtatccaaagatcatatctcct
gttattgaggacgatccagttattgttgggggaattgaacaaccacttgattattcagcc
ccaaatccgaacggtgaacttgataacctttacttggatatgaacggtattgttcatcca
tgttctcatcctgaaaacaaaccggcccctgaatccgaagatgaaatgatgcttgcagtg
ttcgagtatacgaatcgtgtacttaatatggctcgtcccaggaagcttctaatgatagca
gtggatggcgttgctcccagagcaaagatgaatcagcaaagatccagaagatttagatct
gctagagatgcagagatatcaaatgaggagagagaaagaaagatggaagagatggagggc
agaggtgaagtgattgacgagagtattagacacaagaagacatgggattctaatgctatt
acaccaggaactccatttatggatattcttgctgaatcgctgagattttgggttgcatat
aaacttgctaatgatcctggttggagtaaactccaagtcataatcagtgattcttcagtt
ccaggggaaggtgaacacaaaattatgaattttattagatcacaacgatcagatccagaa
tataatccgaataccactcattgtatttatggtttggatgctgaccttatcttcttatca
ttagccactcatgagcctcatttccgtgttctcagagaggatgtttacgctaaggatcag
cttcaaagaaagttgaggaatatggatcagtttggaattgatcaacagacacgtaaccag
attgaacttattgacaagaaaaaaccctttatttggcttcacataggtattttaagagag
tatttagctgttgagctttccatcccaaggctatcgttcaagtttgacttggaaagagcg
atcgatgattgggtgttcatgtgcttcttttgtggtaatgattttttaccacatttacct
tgccttgatgtcagggatagtagcattgacactctagtctctatttggaaacgaattatg
ccaagactaaagggatatattacttgtgatgggcagcttgatcttgctggggttgaagca
ttgctggaggagcttggacgtatggaagatactattttgtacaagaagcatgagaaagat
aggcgtagggaggataattacaagagaagaaaaattgaaaaggaccaaagaagcttaata
aagaacgaacttcttaaaactgtttctaagggcaaagataatgcaccgattatgccttca
caaaacatgactttgaccaatttaaacacaggtaaaatgtcaggcggtttgaaaatgtcc
aataacgaaattgttcagaacataaacacaatatctaaggctaattcggcaaatcaaagt
gttgccgacatcttgagacaaaatattgcgaatgcaaatttaacacagaaggatgatgct
gagaccaaaaattatagcagtagtgagccaattgatgcttctacgacagatgactccagg
aaaaggaataccgattctgcattcagttcggatacagaggaatccacttcgggagcatta
gtcgataataatgacgatgtgatcagaatgtgggaaccaggatttagaaagagatattat
caggcaaaatttcacactcaagatgaggaacaattggagcaaattcgcagaaatatggtc
gagggatatgttgaaggtatttcatgggtgttattatattactatcagggttgcccttcc
tggaattggtattatccattccattatgctccgttcgccttggactttaaaaatttaacg
gatattgatgttacatttgaaagaggagagccatttaaaccttttgagcaattgatgagt
gtgcttccagcagcttctaagcacaaccttccggatgtttttggacctttgatgtgcgat
gaagattctgaaattattgatttctatcctaaagagtttcaggtggatatgaatggagcc
aaaatgtcttggcaaggaatatctctgcttccatttattgacgaaaaaaggcttctcaaa
gctgtgagatcgaaatatgggagtctgacaccagaagaagttgaaagaaatacattgaag
catgaaattttgttgattggtcgtgataatgctcatttcaaatggtttaagacactttat
accgacaaaaatgaaaataacacaaatgtggatggaccggttttgcaatttcatggtaga
gaagccggattatctggcaaagtgatgccatgccaagagtttgatccaaagggcgagaga
aaatttccactcaaggctactgcgggagtaaataccgagcaatatgtggatgtgcctaac
aattcttacatggagttaagctacagaatgccacctaaggctaaaggaaaatcaatgctt
ttaaatggatatatttctcatttattgattttaacggaacaggacaaggacaatgttaga
cacagccataacagattttataggggtaatcatttcgaagttcctacaaatattgactat
agtcaatatgttggcccatatggcaagacagagtatagcaatcgtgttggaggttacaaa
agctatctcgatatgtacaagtataattcagatcgttatcagcaaacacagcaatttaac
cgttactctggtgggccacaaaatctgggctttggaaatcaaaacggatttgggaattac
aattcgcagacaagtgggtataatagtggctataacaatcaatacgggaataggggatac
aatcagggaaactataactatggttataatccacatggaaatgcgaacgaacaatacaac
aatggatacaaccaaggctatggtagaggtggatataatcagaggagaagttatggtaac
agtggtagaggtagaggaaggggagactatgctggaaataggtacagaaatgattattca
aatcatgaaagttcctatccaaatagggaaaatgaatacggagatcaccataacaacaga
tataacgacagatattaa
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