Brettanomyces bruxellensis: BRETT_001070
Help
Entry
BRETT_001070 CDS
T07183
Symbol
FAL1
Name
(RefSeq) RNA helicase
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03013
Nucleocytoplasmic transport
bbrx03015
mRNA surveillance pathway
bbrx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BRETT_001070 (FAL1)
09122 Translation
03013 Nucleocytoplasmic transport
BRETT_001070 (FAL1)
03015 mRNA surveillance pathway
BRETT_001070 (FAL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbrx03019
]
BRETT_001070 (FAL1)
03041 Spliceosome [BR:
bbrx03041
]
BRETT_001070 (FAL1)
03009 Ribosome biogenesis [BR:
bbrx03009
]
BRETT_001070 (FAL1)
03012 Translation factors [BR:
bbrx03012
]
BRETT_001070 (FAL1)
Enzymes [BR:
bbrx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BRETT_001070 (FAL1)
Messenger RNA biogenesis [BR:
bbrx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
BRETT_001070 (FAL1)
mRNA cycle factors
Stress granule specific factors
BRETT_001070 (FAL1)
Spliceosome [BR:
bbrx03041
]
Complex C
Other components
EJC/TREX
BRETT_001070 (FAL1)
Ribosome biogenesis [BR:
bbrx03009
]
Eukaryotic type
90S particles
Helicases
BRETT_001070 (FAL1)
Translation factors [BR:
bbrx03012
]
Eukaryotic type
Initiation factors
eIF-4
BRETT_001070 (FAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
Helicase_RecD
SPP1_GP23-1
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
64572995
NCBI-ProteinID:
XP_041137841
UniProt:
A0A871RC42
LinkDB
All DBs
Position
8:complement(1937626..1938816)
Genome browser
AA seq
396 aa
AA seq
DB search
MEFDKDLDKGLKFKTSKKIPVFGSFEEMNLKEDLLKGIYSYGFEAPSAIQSRAIMQIISG
RDTIAQAQSGTGKTATFSIAMLQTIDINKKDTQALVLSPTRELAIQIQDVIKSLGDYMNV
KCHACTGGRAVGNDMKSLNKGQHIVSGTPGRVLDMINRRVLNTRHIKMLVMDEADELLGK
GFQDQIYEIYKFLPPGAQVVVVSATVPHSVLAVTRKFMNNPVKILVKRDEITLEGIKQYY
VQVEKEDWKFDTLCDLYDSLTITQAVIFCNTKKKVNWLADSLKNANFSVVSMHGDMKQEE
RDKIMNEFRLGNSRVLISTDVWARGIDVQQVSLVINYDLPIDRENYIHRIGRSGRFGRKG
VAVNFVTKDDVDTLHDLEHFYDTKIDEMPADLSTVV
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgataaagaccttgataagggtctaaagtttaagaccagtaagaaaattcct
gtctttgggtcatttgaagaaatgaacctaaaggaggatcttttgaagggaatatacagt
tatgggtttgaagccccatccgccattcaatccagagccataatgcaaatcatatcaggg
agggatactattgctcaagcacagtctggaaccggtaaaactgctacattttcaattgcc
atgctacaaacaatagacatcaacaaaaaagatacacaggccttagttctctcacctaca
agggagttggctatacaaattcaggatgttatcaagtcattaggtgattacatgaatgta
aaatgtcatgcctgcacgggaggtcgtgctgttggtaatgatatgaagagtcttaataaa
ggtcagcatatagtaagtggtaccccaggtcgagttcttgatatgataaatagaagagta
ctaaacactaggcacataaaaatgctggtcatggatgaagctgacgagttattaggcaaa
ggctttcaggatcaaatatacgaaatttataaattcttacctcctggagctcaagttgtc
gttgtctcagcaactgtgcctcatagtgttctggcagtgacacgaaaatttatgaataat
ccagtgaaaattctagtgaagagggatgaaattactttagaggggatcaaacagtattac
gttcaagtagaaaaagaggattggaaatttgataccttatgtgatttatatgattccttg
actattacccaagcagttatattttgcaatactaaaaagaaggtcaactggctagcagat
tcattgaagaatgccaatttctctgtagtgtcaatgcacggagacatgaagcaagaagaa
cgtgataaaattatgaacgagttccgattgggtaattcaagggtgttgatatctaccgat
gtgtgggcaagaggaattgacgttcagcaagtgtcactagtgattaattatgatcttcca
atcgatagggagaactatattcatagaatcggccgttctggaagatttggaaggaaaggt
gtcgcagtaaattttgtcaccaaggatgatgtagacacgttgcatgatctcgagcatttt
tacgacacaaagatagatgagatgcccgctgacttgagtacagttgtctaa
DBGET
integrated database retrieval system
