Brettanomyces bruxellensis: BRETT_001117
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Entry
BRETT_001117 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03018
RNA degradation
bbrx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BRETT_001117
09123 Folding, sorting and degradation
03018 RNA degradation
BRETT_001117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbrx03019
]
BRETT_001117
03041 Spliceosome [BR:
bbrx03041
]
BRETT_001117
Messenger RNA biogenesis [BR:
bbrx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BRETT_001117
mRNA degradation factors
5'-3' decay
Lsm complex
BRETT_001117
Spliceosome [BR:
bbrx03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
BRETT_001117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
BPL_C
Motif
Other DBs
NCBI-GeneID:
64573042
NCBI-ProteinID:
XP_041137888
UniProt:
A0A871RB52
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All DBs
Position
8:2035174..2035581
Genome browser
AA seq
135 aa
AA seq
DB search
MEGRRNNNDSGRSSYGRQQNNRNGGHKRHERFEGPKREAILKLQNYLNQEIIVNLSGGRE
VEGKLTGFDQLMNLVLEDTVEKLRDVNDRTKFTGSTRKLGKIIIRGPLLLAISPKDGFEM
ISNPFVSESSQEKIL
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaaggcgtaataacaatgactcgggtcgatcatcatatggtcgccaacaaaat
aatcgaaatggtggtcataaaaggcatgaaaggtttgaaggaccaaagagagaagcaatt
ctcaagctacagaactatttgaatcaagaaataattgtgaatttatcaggtggacgagag
gttgaaggtaaattaactggtttcgatcagttgatgaatctcgtcttggaagacacggtt
gaaaaactaagggatgttaatgatagaacaaaattcactggaagcacaagaaagttgggt
aaaataattataagaggtccattgttattggcaatctcgccaaaagatggttttgagatg
atttcgaacccattcgtgtctgagtcgagtcaagagaagattttatag
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