Brettanomyces bruxellensis: BRETT_001306
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Entry
BRETT_001306 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K12830
splicing factor 3B subunit 3
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BRETT_001306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbrx03021
]
BRETT_001306
03041 Spliceosome [BR:
bbrx03041
]
BRETT_001306
03036 Chromosome and associated proteins [BR:
bbrx03036
]
BRETT_001306
Transcription machinery [BR:
bbrx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
BRETT_001306
Spliceosome [BR:
bbrx03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
BRETT_001306
Complex B
BRETT_001306
Complex C
U2 SnRNP specific factors
BRETT_001306
Chromosome and associated proteins [BR:
bbrx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
BRETT_001306
TFTC complex
BRETT_001306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
SSrecog
TMEM65
Motif
Other DBs
NCBI-GeneID:
64573231
NCBI-ProteinID:
XP_041138074
UniProt:
A0A871RGJ4
LinkDB
All DBs
Position
8:2495946..2499794
Genome browser
AA seq
1282 aa
AA seq
DB search
MSAAVKPDFYLYNLTLQRSSSAIQCCIGNFTGAKHQQQIVRCTQAALELWTFNKRTGALT
KVLEQYAYSNLRKISAFRPSGFSKDFLIVTSDSGDLSILELDNESFKFRRVVDLPYTKSG
IRAITPGEYIALDGQSRAFLLGSILKNKIACSVIRDEANKPSVSSLLEANHSGTVTFAMC
GLDVGFDNPLFAAIESTTHSRSGKKSLRYYELDLGLNYVVKKYTEEAPESVNFLLSVPGG
IYGPSGVLVCSKGLIQYKYLTKMTHNIPIPRREGQKQDAQIIAGVVHVLKRDYFILLQTD
LGDLFKVTVTGKKQDSDESDGQAGMVDKIEIRYFDSMPICTSLLIFRSGFLYANCESGDQ
YIYQFEKLGDDPGEKVWCSTDFPDEIAAKTCENAVFQPRQFVNLNLVYIVENLNPVIDCT
IHSSDNVTDLPVIISLCGSQSRSSLKILNHEIPYTEIVSQELPSKVEAVFAFATHADDAN
DKLIALSFYDETLLLKIGEEVEEAENTGFKTDVATLAAAQLGNGSVVQVYADGLRQIFYD
DDDKPVDTVDWKAPVGIEVLHGAVSETQVVLALSSREIAYFEVDEQDRLIEYGERKELGS
QITSLCLGELSGGHKRFPFIFAGGKNQTLTVLKTDPSSTLDVVSKQDLSSVPTSSAAFSM
KSPSAFVHSESDDEADEDESRIHQESLFLHIGMANGVYARLKLDPVTGELSNPRNQYVGP
QKVLLSKLEICHQNVVAINSVRTYLGYTTTTDFTITALSKPAFCDLCTFKSEDVPNNGVL
AIDSNTLYILTVDQLDSSLLIESIPLRYTPKAMADTINDNGMVYIAEADNGLRSPYVDEV
KKEENSDKNSSSPPISNEPNHSNEPNNSNEPNNSNEPNNSNDSANSNDSANSNDSANSTL
PDEIVLYETDDEKDEYYQQFGYPHLESSWASCIQVASFENKAVGQTIELLNEAAFKMCSV
TFSSNLEQLFLVVATSVHQRFAPNRNDGTHLRVYEVQQDGSLTFHYKTQTEDLALSLTSF
QGMLLAGIGNTLVLYTLGKKQLLKKSALKLDCRTIVDIKRAGNNIFVSDINDSVRFVTYK
PLVSSFFVVSDDCIQRHVTRALPLDERTVMVGDKFGELSVLRCDPNAWSASQNDPHGTFI
GSMKGEMNGAPFRLSNLMNFYIGDVPTSLGKGTLTVGGSECILYAGIQGTIGCMHPLRTV
KEMNFFVELQKHVCRELEPITGREIMKFRSYYIPIKGCIDGDLLEEYFRMSWEKRQRIAK
QMDREPREIDRRISDMRTRFAY
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagcggtcaagccggatttctatctctacaatctcacacttcaacggtcttcc
tcggccatacaatgctgcattggaaactttaccggcgctaaacaccaacagcaaattgtt
agatgtacacaagcagcgttggaactatggacattcaacaagagaacaggcgccttgacg
aaggttctagagcagtatgcatatagcaatttacgcaaaatcagtgcctttcggccctcg
ggcttcagcaaggatttcttaattgtgacttccgatagtggagacttgagtattttggag
cttgataacgagagcttcaagtttagaagagtggtcgatctaccgtacaccaagagtggg
attcgtgccataacacccggcgagtatattgccttggatggtcaaagcagggcttttttg
ctggggtcaattctgaagaataagattgcctgctcagtaatacgagatgaggccaacaaa
ccgtctgtttcctcactattggaagctaatcacagcggaacggtgacttttgccatgtgc
ggactggatgttgggtttgacaacccgctttttgctgcaatagagtccaccacacactcg
cgaagtgggaagaaaagcctcaggtactacgagttggatcttggccttaattacgttgtg
aaaaagtacactgaggaagcaccagagtcggtgaacttcctcttgagcgttcccggcgga
atatacggcccatcaggcgttcttgtgtgctctaagggactcatacagtacaaatacttg
acgaaaatgacacataacatcccgattcctagacgagaaggtcaaaagcaggatgcacag
atcatagctggtgtggttcatgttctcaagcgagactacttcattcttcttcagacggat
ctcggtgatctgttcaaggttacggtgacaggaaagaagcaggattcggacgaatcggac
ggtcaggcggggatggtggataaaatcgagatacggtactttgactcaatgccaatctgc
acttccttgctaatcttccggtccggcttcttgtatgcgaactgcgagtccggagaccag
tacatataccagtttgagaagttgggggacgatccgggcgaaaaagtgtggtgctcaacc
gattttccagacgaaatagcggcaaaaacgtgcgagaatgctgttttccaaccgcggcag
tttgtgaacttgaacctggtgtacattgtggaaaacttgaaccctgtcatcgactgtacc
atccactcctcggataacgtgacggatttgccggtgatcatcagtctttgtggcagccag
tcaagatcatcactcaagattctcaaccacgaaattccgtacacagagatcgtttcgcag
gagttgccgtcgaaagtcgaggcggtgtttgcgtttgcgacccatgcagatgacgcaaac
gacaagttgatcgcactctcgttttatgatgagacgttacttcttaaaatcggtgaggag
gtcgaagaagcagagaataccggctttaaaacggatgtggcgactttggcggctgcacag
cttggaaatggctctgttgtgcaagtttatgctgacgggctgaggcagattttctatgat
gacgacgacaagcctgttgatacggtagattggaaggctccagttggaatagaggtactg
catggtgctgtgagtgagacacaggtggttcttgctctctccagcagagaaatcgcgtac
ttcgaggttgatgagcaagacaggcttatagaatatggcgagaggaaggaactgggttcg
cagatcaccagtttgtgtcttggtgagctttccggtggccacaagcggtttccgttcatt
tttgccggtggaaagaaccagacgttgactgtattgaagacagatccaagttcgactctt
gatgttgtttccaagcaggacttgagctctgtaccgacatcttcggctgcgttttcgatg
aagagtccaagtgcgtttgttcactccgagtctgatgatgaagcagacgaagatgaaagc
agaattcaccaggagtcgctttttctccacattggaatggccaatggtgtgtatgcccgt
ctcaagttggacccggtaacaggagagttgagcaacccaagaaaccagtatgtaggtccg
caaaaagtgcttctctcgaagcttgaaatctgccaccagaatgtggttgcaataaattct
gttcggacctatctcggctacacgaccaccaccgacttcacgatcaccgcgttgtcaaaa
ccggcattttgtgatctttgcacgttcaaaagcgaggatgttccaaataacggtgtgttg
gcaattgactcaaacacgctgtacattctgacagtagatcagctagattccagccttctt
atagagagcattccgttgcgatacacacccaaggccatggctgataccattaatgataat
ggaatggtttacatagctgaggctgacaacggtttgcggtctccgtatgtggatgaggtc
aagaaggaagagaattcagataaaaattcaagcagtccacctatttcaaatgagccaaac
cactcaaatgagccaaacaactcaaatgagccaaacaactcaaatgagccaaacaactca
aatgattcagctaactcaaatgattcagccaattcaaatgattcagccaattcaactcta
ccagacgaaatcgtgctttatgaaacagacgacgagaaagatgagtactaccaacagttc
ggatatccgcatttggaatccagctgggcctcgtgcatccaagtggcctcttttgagaac
aaggctgtgggccagaccattgagcttttaaacgaagcagctttcaaaatgtgctctgtc
acattcagctccaacctcgagcagctcttcctggtagtggctacatccgtgcaccagagg
tttgctccaaaccgcaatgatggcactcacttacgggtttacgaggttcagcaggacgga
tcgttgacttttcattataagacgcagactgaagatcttgcattgtctttgaccagcttc
caggggatgcttttggccggaataggcaatactttggtgctctacactcttggaaagaag
cagcttctcaagaaaagtgcattgaagcttgactgccggacgatcgtcgatataaaaagg
gcaggtaacaacatattcgtcagcgatatcaacgacagtgtcagatttgtgacgtacaaa
cccctcgtgtcaagctttttcgttgtttcggatgactgcatccagagacacgtgacgagg
gccttaccactagatgagcgaactgtgatggttggcgataagtttggcgagctttctgtg
ctaagatgcgatccaaatgcgtggtcagcttcccagaatgatcctcacggcacatttatt
ggcagcatgaagggagaaatgaacggggcaccgttccggttgagtaacttgatgaatttc
tacattggagatgtgccgacgagtttgggtaaaggaacactaactgttggtggcagtgag
tgcatattgtatgctgggatacagggcactatcgggtgcatgcatccgttgcggacagtg
aaggagatgaacttctttgtggagttacagaagcatgtgtgcagggagttggagccgata
acgggccgagagattatgaagtttagaagttattatataccgattaaaggctgcattgat
ggcgatctgttggaggagtacttccgaatgagctgggaaaagcggcaaagaatagccaag
cagatggatagagagcctcgggagattgatcgaagaatatccgacatgcggacgaggttt
gcttattag
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