Brettanomyces bruxellensis: BRETT_001416
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Entry
BRETT_001416 CDS
T07183
Symbol
RPB3
Name
(RefSeq) 45 kDa subunit of RNA polymerase II
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03020
RNA polymerase
bbrx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BRETT_001416 (RPB3)
09124 Replication and repair
03420 Nucleotide excision repair
BRETT_001416 (RPB3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbrx03021
]
BRETT_001416 (RPB3)
03400 DNA repair and recombination proteins [BR:
bbrx03400
]
BRETT_001416 (RPB3)
Transcription machinery [BR:
bbrx03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
BRETT_001416 (RPB3)
DNA repair and recombination proteins [BR:
bbrx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
BRETT_001416 (RPB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
64573341
NCBI-ProteinID:
XP_041138183
UniProt:
A0A8H6BNN1
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All DBs
Position
8:2785795..2786709
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AA seq
304 aa
AA seq
DB search
MSNKEPQVTIRKAGRDDVDFILSDVDLSLANSIRRTMLAEVPTLAIDLVDIKRNTSVLAD
EFLAHRLGLVPLESEDIDQLKYTRDCTCEDHCEKCSVTLQLKARCDSDETMNVYSSHLVV
ISANTGLNLGQPVIRDPQKKGVLICKLKRHQELNIVCIAKKGIAKEHAKWSPCSAIGFEY
DPWNKLRHTDYWYEEDEAKEWPKSANCDWEEPPVPGEKFDYNKKPTRFYMNVETTGVLKP
NEVFSKGCTELQKKVANIVFELDKLDHKEREQQRDGAEDGYAAVGDGNMQDDAAFGDMES
SGRW
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacaaagaaccacaggtgactataagaaaagcaggaagagacgatgtcgatttt
atactctcggacgtggatctgtcgcttgccaactcgattagaagaacgatgttggcggag
gtgccgactcttgcaattgatttggttgacattaaaagaaacactagtgttttggcagac
gagtttttggcacacagattgggactagtcccactcgaaagtgaggacatcgaccagctc
aagtacacaagagactgcacgtgcgaggatcactgcgagaagtgttcagtgacattgcaa
ttaaaggccagatgtgactcagacgagacgatgaacgtctactcgagccatttggtggtc
atcagtgcaaacacaggcctgaatttgggccagccggtgatcagggacccccagaagaag
ggtgtgcttatctgcaagttgaaaagacaccaggagttgaatattgtgtgcattgcaaag
aaaggaatagcaaaagagcatgcgaaatggtctccatgttcggcaataggttttgagtac
gatccctggaacaagctcaggcataccgattactggtatgaggaggatgaggccaaggag
tggcccaaatcggcaaactgcgactgggaggagccacctgtccccggtgagaaattcgac
tacaacaaaaagccaaccagattctacatgaatgtcgaaacgaccggcgtgttgaagccc
aacgaggttttctctaaaggctgcaccgaattgcagaagaaggtggccaatattgtcttt
gaacttgataagctggaccacaaagagcgtgaacagcagagagatggggctgaggatgga
tatgctgctgtgggtgatggaaatatgcaggatgatgctgcatttggcgacatggagtct
tcgggaagatggtga
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