KEGG   Brettanomyces bruxellensis: BRETT_002024
Entry
BRETT_002024      CDS       T07183                                 
Name
(RefSeq) uncharacterized protein
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
bbrx  Brettanomyces bruxellensis
Pathway
bbrx03018  RNA degradation
bbrx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bbrx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    BRETT_002024
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BRETT_002024
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbrx03019]
    BRETT_002024
   03041 Spliceosome [BR:bbrx03041]
    BRETT_002024
Messenger RNA biogenesis [BR:bbrx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     BRETT_002024
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     BRETT_002024
Spliceosome [BR:bbrx03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    BRETT_002024
SSDB
Motif
Pfam: LSM SM-ATX IPI_T4 RepD-like_N
Other DBs
NCBI-GeneID: 64573948
NCBI-ProteinID: XP_041138353
LinkDB
Position
9:331851..332225
AA seq 124 aa
MLPLFLLNSVKGQPIMVELKRGETLNGTLTNCDSWMNITMKDIVVSDAHGENFYKLKSTY
VKGIHIKYITMSNDLIDKFREEQLKEREYYRHRNNGGNNYQRRGNRRNYNGNQRYGGHSN
RSQA
NT seq 375 nt   +upstreamnt  +downstreamnt
atgctcccacttttccttctcaactcagtcaagggccagccaatcatggtcgagcttaag
cgcggagaaactctgaatggcacactgacaaattgtgactcgtggatgaatatcacaatg
aaagatattgttgtgtcagatgctcacggcgagaacttctacaaactcaaatcaacatac
gtcaaaggaatacacatcaagtacataacgatgtcaaacgacctcatagataagttcagg
gaggagcagttgaaagaaagagaatactacagacaccgtaataacggtggtaataactac
cagagaagaggcaacaggaggaactataacgggaaccagaggtatggagggcactcgaat
cggtcacaggcttga

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