Brettanomyces bruxellensis: BRETT_002024
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Entry
BRETT_002024 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03018
RNA degradation
bbrx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BRETT_002024
09123 Folding, sorting and degradation
03018 RNA degradation
BRETT_002024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbrx03019
]
BRETT_002024
03041 Spliceosome [BR:
bbrx03041
]
BRETT_002024
Messenger RNA biogenesis [BR:
bbrx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BRETT_002024
mRNA degradation factors
5'-3' decay
Lsm complex
BRETT_002024
Spliceosome [BR:
bbrx03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
BRETT_002024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
IPI_T4
RepD-like_N
Motif
Other DBs
NCBI-GeneID:
64573948
NCBI-ProteinID:
XP_041138353
LinkDB
All DBs
Position
9:331851..332225
Genome browser
AA seq
124 aa
AA seq
DB search
MLPLFLLNSVKGQPIMVELKRGETLNGTLTNCDSWMNITMKDIVVSDAHGENFYKLKSTY
VKGIHIKYITMSNDLIDKFREEQLKEREYYRHRNNGGNNYQRRGNRRNYNGNQRYGGHSN
RSQA
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
atgctcccacttttccttctcaactcagtcaagggccagccaatcatggtcgagcttaag
cgcggagaaactctgaatggcacactgacaaattgtgactcgtggatgaatatcacaatg
aaagatattgttgtgtcagatgctcacggcgagaacttctacaaactcaaatcaacatac
gtcaaaggaatacacatcaagtacataacgatgtcaaacgacctcatagataagttcagg
gaggagcagttgaaagaaagagaatactacagacaccgtaataacggtggtaataactac
cagagaagaggcaacaggaggaactataacgggaaccagaggtatggagggcactcgaat
cggtcacaggcttga
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