KEGG   Brettanomyces bruxellensis: BRETT_002055
Entry
BRETT_002055      CDS       T07183                                 
Symbol
LSM5
Name
(RefSeq) RNA-binding protein lsm5
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
bbrx  Brettanomyces bruxellensis
Pathway
bbrx03018  RNA degradation
bbrx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bbrx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    BRETT_002055 (LSM5)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BRETT_002055 (LSM5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbrx03019]
    BRETT_002055 (LSM5)
   03041 Spliceosome [BR:bbrx03041]
    BRETT_002055 (LSM5)
Messenger RNA biogenesis [BR:bbrx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     BRETT_002055 (LSM5)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     BRETT_002055 (LSM5)
Spliceosome [BR:bbrx03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    BRETT_002055 (LSM5)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 64573979
NCBI-ProteinID: XP_041138384
UniProt: A0A871RHJ2
LinkDB
Position
9:complement(393171..393452)
AA seq 93 aa
MSAENKETQDTEVPQILPLELIDKSIGTKIWAIMSDFHEFVGTLEGFDDFVNIVLSDVTE
YDVSKKVVSKKSKMLLSSRNLAMLVPGGDGPDF
NT seq 282 nt   +upstreamnt  +downstreamnt
atgtcggctgaaaacaaggaaacacaggacacggaagtgccacaaattctaccgttagaa
cttattgataagagcattggtacaaaaatatgggcaatcatgtctgattttcacgaattc
gtggggaccttagaaggattcgatgatttcgttaatatagtgttgagtgatgtgacagag
tatgacgtttcgaaaaaagtggtgtcaaaaaaatctaagatgcttctatcatcgaggaat
cttgcaatgcttgttccaggaggagacggaccggatttttag

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