Brettanomyces bruxellensis: BRETT_002080
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Entry
BRETT_002080 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K13126
polyadenylate-binding protein
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03015
mRNA surveillance pathway
bbrx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
BRETT_002080
09123 Folding, sorting and degradation
03018 RNA degradation
BRETT_002080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbrx03019
]
BRETT_002080
03041 Spliceosome [BR:
bbrx03041
]
BRETT_002080
Messenger RNA biogenesis [BR:
bbrx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
BRETT_002080
mRNA cycle factors
Stress granule specific factors
BRETT_002080
Spliceosome [BR:
bbrx03041
]
Complex C
Other components
Complex C specific factors
BRETT_002080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RRM_10
RRM_5
RRM_3
RRM_occluded
OB_RNB
Motif
Other DBs
NCBI-GeneID:
64574004
NCBI-ProteinID:
XP_041138409
UniProt:
A0A871R9I1
LinkDB
All DBs
Position
9:453534..455498
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AA seq
654 aa
AA seq
DB search
MSSADVNELTEATAKLSVEDKVEKKEAASPASEKADGAKSEEAENGKDSKDSKDNEQTFA
SLYVGDLDPSVTESDLYEIFSKVGQVSSIRVCRDAVTKKSLCYAYVNYQKREEAEHALDT
LAFCDIKGKQCRIMWSQRDPSMRKKGTGNVFIKNLHPDIDNKTLYDTFSTFGKILSCKIA
TDEHGHSKGFGFVHYDDAESAKAAIENVNGMLLNNMEVYVAPHIPRKDRESKMQEMIKNF
TNVYVKNFGPEMTEDQLREMFEAYGKVTSTYLPTDNEGKARGFGFVNFEDHEEAAKAVDA
LNEKELEGGRILYVGRAQKKREREESLRKQWQQARQERISKYQGVNLFVKNLDDTIDDTK
LKEEFAPYGKISSAKVMTNDAGKSRGFGFVCYTKPEEATRAINEMHQRMVMGKPLYVALA
QRKEVRHNQLSQQFQQRNQMRLQQAAVQGGMGQFVAPIFYGQNAGFIPPMPAGVRGAPFA
GNGAPQMMMQQGASRPGQGVPVSPGQFRVGPNGQPVPMYMQPMFNEYQQQQQQQRYYQRQ
NHGNAPAGAGKKGDKPGEEQEAAVTAVNSASLADFLPKLAPEQQKRALGEELYAKIEATG
EASDKEAVGKITGMMLSMDNKQILDMLKDDALFNTQFQQALSAYESYKKGPDAQ
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgcagatgttaatgaattgactgaggcaacagccaagttgtccgtcgaagat
aaggttgagaagaaggaggcagcttctccagctagcgagaaggctgatggtgccaagagt
gaggaggcagagaatggcaaggactccaaggactccaaggataacgagcagacttttgct
tcgttgtacgttggtgacttggatccaagtgtcactgagtccgatctttacgagattttc
tcgaaagtcggtcaggtttcttcgatccgtgtctgcagagatgcagtcaccaagaagtct
ctgtgctacgcttacgtgaattaccaaaagagggaggaggctgagcatgcattggatact
ctggccttctgcgacatcaagggcaagcagtgccgtatcatgtggtcgcaaagagatcca
tcgatgagaaagaagggcacgggtaatgtgttcatcaagaacttgcacccagatatcgac
aacaagactttgtacgatacattctcgacgtttggtaagattctttcatgtaagattgcc
acggatgagcatggccattcgaagggctttggattcgtccactatgatgatgccgagagt
gccaaggctgccattgagaatgtgaacggaatgttgttgaacaatatggaggtgtacgtt
gcccctcacattccaaggaaggaccgtgagtcgaagatgcaggagatgatcaagaacttc
acgaacgtttatgtgaagaattttggccctgagatgaccgaggatcagctccgtgagatg
tttgaggcctacggtaaggtcacatctacgtacctgccaacagacaacgagggaaaggct
cgtggctttggatttgtgaacttcgaggatcacgaggaggccgccaaggccgtcgatgcc
ctcaacgagaaggagctcgaaggtggaagaatcttgtacgttggccgtgcacagaagaaa
agagagagagaggaatctctgagaaagcagtggcagcaggctcgccaggagagaatcagc
aagtaccaaggagttaacttgtttgttaagaatcttgacgacaccatcgatgacaccaag
ttgaaggaggagtttgctccatacggtaagatctcctccgccaaggtgatgactaacgac
gcaggtaagtccagaggctttggatttgtttgctacaccaagccagaggaggccaccagg
gccatcaacgagatgcaccagcgtatggtgatgggtaagccactttacgttgctcttgcc
cagaggaaagaggtccgtcacaaccaactgagccagcagttccagcagcggaaccagatg
cgtttgcagcaggctgccgttcaaggtggcatgggccagttcgttgccccaatattctat
ggccagaatgctggcttcatcccaccaatgccagcaggtgtccgcggtgctccatttgcc
ggaaatggcgctcctcagatgatgatgcagcaaggtgcttctcgtccaggccaaggtgtt
ccagtttcacctggccagttccgtgttggtcctaacggccagccggtgccaatgtacatg
caaccaatgttcaacgagtatcagcagcagcagcagcagcagagatactaccagagacag
aaccacggtaatgcacctgcaggtgctgggaagaagggtgacaagcctggtgaagagcag
gaggctgcggtcactgccgtcaacagtgcttctttggccgacttcttgcctaagcttgct
cctgagcagcagaagagagctcttggagaagagttgtacgctaagatcgaggctactggt
gaggcttctgacaaggaggctgtcggaaagattactggtatgatgctttccatggacaac
aagcagatcttggacatgttgaaggacgatgctcttttcaacacccagttccagcaggct
ttgtccgcctacgagagttacaagaagggacctgacgcccagtaa
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