Brettanomyces bruxellensis: BRETT_002296
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Entry
BRETT_002296 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
BRETT_002296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbrx03019
]
BRETT_002296
Messenger RNA biogenesis [BR:
bbrx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
BRETT_002296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_2
TPR_8
Motif
Other DBs
NCBI-GeneID:
64574220
NCBI-ProteinID:
XP_041138620
UniProt:
A0A871R5S9
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Position
9:950096..952120
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AA seq
674 aa
AA seq
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MVASVVPQKRKTAEIEDSDDVPAKNTKLNPLEELKTKLSYSKWMKSIRTTLKTKDRDAIV
TKFEEYLTIFKNDGKVWAQYIKYEMEHPPEGQEIDKQKIEKMFAQTLTKVCDLDLWKMYL
KYVQKIHPTASKSQEEQDLARSVVLKAFQFAAENVGIDYLRSSELWTEYIKYLNGWKPTN
ANEAATKTELTRQVMVRMISVPSLQLEENWKMYIRFENAVDQAKARKNINDHSPDFMKLR
PLSQELYSITNLLKENNERRHSRKQLARFALWIKWERANKLSLTDDAVEKRVNYVYRLST
QMARYQPEVWYNYASYLLSKKKEDEALDIIRDGLLINPQSLCLTYQLANCHEAQSDLKAT
QKVWIALIDYLKKEYEYLKPDPQKNKELDEHAKTICSCYIMLMKQTKRMATIKEVRRAFA
LARKFEKVSWQVYVSYALIEYQCNEVKVAVRSFELAMRHFGKIYDFVSAYLDFLIGIKDM
TNCKKVIEISLDTLKEDPEATTKLFRRYMKIELSFGDTNSIRSLENRFIARFPDTTPFEL
SVMNFESDYEKYNACLTTDKYISNKIGARKITGEKPASIVENNSIPITDNEVVSGLSVGP
EITNTMDANASTQGIQNATSVDNMQQMVPPRKPFVVRDEVYNLLRVLPKADYYSNQPKIF
DVKKTVKFLRGLNI
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggttgcatcggtggtaccacaaaaaagaaaaacagcggaaatagaagacagtgatgac
gtgccggccaagaacacgaagttaaaccctttagaagagttaaaaaccaagctttcttac
agtaaatggatgaaaagtattcgtactacgttaaaaactaaggatagagatgctattgtg
acaaagtttgaggaatatttgactatttttaaaaatgatggcaaagtttgggcgcaatac
atcaagtacgagatggaacaccccccagaaggccaagaaattgataaacagaaaatcgaa
aagatgtttgctcaaactttgactaaagtttgcgatcttgatctttggaagatgtatctt
aagtatgtacaaaaaatccatcctactgcttccaaatcacaggaagagcaagatttggca
agatctgtcgtattaaaagctttccagtttgcggccgaaaacgtgggcatagattatctc
agatcttctgagttgtggacggaatatatcaaatatttaaacggttggaaaccaacaaat
gcaaatgaagctgctacaaagaccgaactcactcgtcaggtaatggtgaggatgatatca
gttccttctttacagcttgaagaaaactggaaaatgtatattcggtttgaaaatgccgtt
gatcaggcaaaggcaagaaaaaatataaacgatcactcaccggatttcatgaaacttagg
ccgttaagtcaggagttgtattcaattacgaatcttcttaaggagaataatgaaagaaga
catagtagaaagcagctggcaagatttgcactttggattaaatgggaacgcgctaacaaa
ttatcactcaccgatgatgcggttgaaaaaagagttaattatgtttatcgtctatctact
caaatggctagatatcagccagaagtttggtataattatgcttcgtatcttctttcaaaa
aagaaggaggatgaagcattagacattatacgtgacggactattgatcaatccgcaaagt
ctgtgcttaacctatcagttggcaaactgtcacgaggcgcaatcggacctcaaggctaca
cagaaagtttggattgccctaatagattatctaaaaaaggaatacgaatatttgaaaccg
gatccacagaaaaacaaagaattagatgaacatgcgaaaaccatttgtagttgctatatt
atgctaatgaagcaaactaaacggatggcaaccattaaggaggtcaggagagcatttgcc
ttggcaagaaagtttgaaaaggtatcttggcaggtttatgttagttacgctttgatcgaa
tatcaatgcaatgaagtcaaagttgctgtcagatcttttgaacttgcgatgcgccacttt
ggaaaaatttatgattttgtgtcagcctatcttgacttcctcattgggattaaggacatg
acaaattgtaagaaggtgattgaaattagtcttgacacgttaaaggaagatcctgaagcc
acgaccaaacttttcagaagatacatgaagatagagctcagctttggggacacaaattca
attagatcacttgagaacagattcatcgccagatttcccgatacaacaccttttgagctt
tcggttatgaactttgaaagtgactatgagaagtacaatgcttgtttgacaactgacaaa
tatatatctaacaaaataggtgccaggaagattacaggagaaaagcctgcatcaatagtg
gaaaataatagtattcctataactgataatgaagttgtatctggactttccgtgggcccg
gaaataaccaatactatggatgcaaatgcttctacgcaaggtatacaaaatgcaacgagt
gttgataatatgcaacagatggttccaccacgaaaaccatttgtagtgcgagatgaggtt
tacaacttgcttcgtgtgctaccaaaagctgactactatagcaaccaaccgaagatattt
gatgtaaagaagacggtgaagttcctccgggggttgaatatatag
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