Brettanomyces bruxellensis: BRETT_002431
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Entry
BRETT_002431 CDS
T07183
Symbol
DBP2
Name
(RefSeq) ATP-dependent RNA helicase dbp2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BRETT_002431 (DBP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbrx03041
]
BRETT_002431 (DBP2)
03009 Ribosome biogenesis [BR:
bbrx03009
]
BRETT_002431 (DBP2)
Enzymes [BR:
bbrx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BRETT_002431 (DBP2)
Spliceosome [BR:
bbrx03041
]
Complex A
U1 snRNP components
U1 related factors
BRETT_002431 (DBP2)
Complex B
BRETT_002431 (DBP2)
Ribosome biogenesis [BR:
bbrx03009
]
Eukaryotic type
Pre-60S particles
Helicases
BRETT_002431 (DBP2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Utp25_C
Motif
Other DBs
NCBI-GeneID:
64574355
NCBI-ProteinID:
XP_041138751
UniProt:
A0A871RES1
LinkDB
All DBs
Position
9:join(1294340..1295597,1296677..1297032)
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AA seq
537 aa
AA seq
DB search
MSYENNNRGSYRSYGGANSHGYERRDNYRDSYRDNRGGYGGRGDRFEDHELGASLGKQEW
DLDSLPKFEKNFYKEDPEIAKMSDEQIEKFRKDNEMKIFGNDVPRPIETFDQAGFPDYVL
SEVKEMGFEKPTGIQCQGWPMALSGRDMVGIASTGSGKTLAYTLPAIVHINAQPLLQQGD
GPIVLILAPTRELAVQIQQECGKFGHTSRIRNTCVYGGVPRGPQIRALSRGVEICIATPG
RLLDMLEGRKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKSV
QSLARDYLKDYIQVNIGSLELSASHTIKQIIEVCSDFEKREKCCNYLKQEMADEKSKVIV
FASTKRTCDELTTYLREEGWPALSIHGDKEQRERDWVLNEFRTGKSPIMVATDVAARGID
VKDVTAVINYDMPGNVEDYVHRIGRTGRAGAKGTAVTFFTRDNSHQAHDLIVVLREAKQE
VPEELQAMDHRGGRGGNRGGRWGGRGRYGGRRGGRGGFRRNNYRSGANNAPLGARRY
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgagaacaacaatagagggtcatacagaagttacggaggagcaaattctcat
ggttacgagagaagagataactatagagacagttatcgtgataacagaggaggctatggt
ggaagaggagatcgttttgaggatcatgagctaggtgctagtttgggtaagcaggaatgg
gatttggattcgttgcctaagttcgagaagaacttctataaggaagatccagagattgca
aagatgtcagatgagcaaattgaaaaattcagaaaggacaatgagatgaagatctttggt
aacgatgtcccacgtccaatcgagactttcgaccaggccggattccctgactacgttttg
agcgaagttaaggagatgggtttcgaaaaacctaccggtattcaatgccaaggttggcct
atggcactttctggtcgtgatatggttggtattgcatccactggttccggtaaaactttg
gcttacactttgcccgccattgttcatattaacgcccagcctttgcttcagcaaggcgat
ggtccaattgttttgattttggcacctacaagagagttggcagtgcaaattcagcaggag
tgcggaaaattcggccacacctcaagaattagaaacacctgtgtttacggtggtgttcca
aggggtccacaaatcagggctctttccagaggtgttgaaatctgcattgccaccccagga
agattgctggatatgctcgaaggaagaaagactaacctcaggagagttacatacttggtt
ctagatgaagccgacaggatgttggatatgggtttcgagcctcaaatcagaaagattgtt
gatcagatcagacctgacagacaaacattgatgtggtctgcaacttggcctaaatcagtt
cagtctttggctagggactatcttaaagattacattcaggtcaacatcggttcgcttgag
ctttccgcttcccacactatcaagcagattattgaggtctgctctgatttcgagaagagg
gagaagtgttgcaactacctgaagcaggagatggctgatgagaaatcaaaggtgatcgtt
tttgcttcaactaagagaacgtgcgatgaattgaccacatatcttcgtgaagagggatgg
cctgcactttctattcatggtgataaggagcaaagagagagagactgggtcttgaacgag
ttccgtacgggaaaatcgcctattatggttgctactgatgttgcagccagaggtattgat
gtgaaggacgttaccgcagttatcaactacgatatgcctggaaatgttgaggattatgtc
catcgtatcggaaggacgggaagagccggcgctaaaggaactgcagtgacatttttcaca
agagacaactctcatcaagcacatgacttgatcgttgttcttcgtgaagcaaagcaggaa
gttccagaagaattgcaagctatggatcacagaggtggccgtggtggaaatagaggtgga
agatggggaggaagaggaagatatggaggcagacgtggtggacgtggaggtttccgtaga
aataactacagaagtggtgctaacaatgctcctctgggtgccagaaggtactga
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