KEGG   Brettanomyces bruxellensis: BRETT_003165
Entry
BRETT_003165      CDS       T07183                                 
Name
(RefSeq) uncharacterized protein
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
bbrx  Brettanomyces bruxellensis
Pathway
bbrx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bbrx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BRETT_003165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbrx03019]
    BRETT_003165
Messenger RNA biogenesis [BR:bbrx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     BRETT_003165
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     BRETT_003165
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 64575089
NCBI-ProteinID: XP_041139468
UniProt: A0A871RFW7
LinkDB
Position
9:3138552..3140303
AA seq 583 aa
MSGLRYNSHIMGIQGQSPAEVLRQQQQNQQMAQQAALQHSGVGTQQNQLGEASASSGLQG
VPLSMMMSPQFQGRGNINVGMQGSAQQTPQQQQQLFQQVQQQQIAAISAQRLAQQQQQQQ
QQQAQAQKPNYMISPIALQQQQIRTPLRSQAEPQLQLRQLQLQQLKLRQQQQQQPQQQQE
FLIQNSMQKQHDTSVSPLTAQSSDTRVRQVWSDNLESEMALIRELAGVYNNICVSTEFAG
IVARPMGTFRSTKDYHYQTMRSNADLLNLIQVGITLSDKDGHIPVSAPSTWQFNFKFDLN
KEMFSKESVDTLMTSGVDFAKLSMNGIIADDFAQCIIDSGLCLLPDVTWVSFHAGYDFGF
LISLLMNKEMPSSQQRFSQWASTYFPTFYDIKLISIAKVIGNGNIYKDRFSLEDLAQLLG
IHEADFNLLQVGEQSIIIQLCFNVLRHLLGNDILVSCKNRIWGLTDDVSTSISESNVKIN
TSLNSQEQSGGSSLQTPLQSLQTLLQQKQQEHIPIDGSQQMRKLLQSQGLLLNHGNNAND
PNLSNSIPSAQQDMLSPPNVPPPGILVDQKGILSPAMTYYNAV
NT seq 1752 nt   +upstreamnt  +downstreamnt
atgtccggtctgaggtataactctcatattatgggaattcaagggcagagtcctgctgaa
gtactccgtcagcaacagcaaaatcaacaaatggctcaacaagcagcacttcaacatagt
ggagttggcacacagcaaaatcagttaggcgaagcatcagcttcatcaggtttacaaggt
gtacctctttcgatgatgatgtctccacaatttcaaggtaggggaaatataaacgtaggt
atgcaaggctcagcgcaacagacaccgcagcaacaacaacagctgtttcagcaggtgcag
cagcagcagatagccgctatttcagctcaaagacttgcacaacaacaacaacagcagcag
caacaacaagcacaagcgcaaaaacccaattacatgatttcgcccatagcgttacagcaa
cagcaaattcgcacacctcttcgttcacaggcagagcctcagctgcaacttcggcaactt
cagttacaacagcttaagcttaggcaacaacagcaacagcagccccaacaacagcaagaa
tttttaattcaaaattcaatgcagaaacaacatgatacatcggtgtcacctcttacagca
caaagctctgatacaagagtcaggcaagtttggagcgacaacttggagagtgaaatggca
ttgattagggaactagccggcgtgtacaacaatatatgtgtttcgacagagtttgctggt
attgttgcacgtccaatgggaacatttcgttccacgaaggattaccactatcaaactatg
aggtccaatgccgacttattgaacttaattcaggttggtattacattaagtgataaagac
ggccatattcctgtttctgctccttctacttggcagtttaattttaagtttgatctcaat
aaagaaatgttcagtaaagagtcggtggatacgttaatgacatccggtgttgactttgca
aaattaagcatgaatggaattatagcggatgactttgcacaatgcattattgatagcggg
ctttgccttttaccagatgtgacttgggtaagctttcatgcaggatacgattttggcttt
ttgatctccttgctcatgaacaaagaaatgccttctagccaacaaagattttcgcaatgg
gcttctacatattttccaacgttctacgatatcaaacttatttcaattgcaaaagttatc
ggaaatggaaatatttacaaggatcgtttttctttggaagatcttgctcagttgcttgga
attcatgaagcggactttaatctcctgcaagttggagagcaatcaattataatacaatta
tgcttcaatgtactgcgccatctgctaggtaacgatattttggtttcttgtaagaatcga
atctggggattgactgatgatgtctccacaagtatttctgaaagcaatgttaagataaac
acttctttgaattcgcaggagcaaagtggtgggtcatctctacagacaccacttcagtct
ttgcaaacgcttcttcaacaaaagcagcaagaacatattccaatagatgggagtcaacaa
atgagaaaactgcttcaatcgcaaggactgcttcttaatcatggaaacaatgccaatgat
cctaatctatcgaattcaataccatctgcacagcaagacatgctgtcacccccaaacgtt
ccaccacctggaattttagttgatcagaaaggtatattatcaccggctatgacatattat
aatgcagtttag

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