Brettanomyces bruxellensis: BRETT_003165
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Entry
BRETT_003165 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRETT_003165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbrx03019
]
BRETT_003165
Messenger RNA biogenesis [BR:
bbrx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BRETT_003165
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
BRETT_003165
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
64575089
NCBI-ProteinID:
XP_041139468
UniProt:
A0A871RFW7
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Position
9:3138552..3140303
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AA seq
583 aa
AA seq
DB search
MSGLRYNSHIMGIQGQSPAEVLRQQQQNQQMAQQAALQHSGVGTQQNQLGEASASSGLQG
VPLSMMMSPQFQGRGNINVGMQGSAQQTPQQQQQLFQQVQQQQIAAISAQRLAQQQQQQQ
QQQAQAQKPNYMISPIALQQQQIRTPLRSQAEPQLQLRQLQLQQLKLRQQQQQQPQQQQE
FLIQNSMQKQHDTSVSPLTAQSSDTRVRQVWSDNLESEMALIRELAGVYNNICVSTEFAG
IVARPMGTFRSTKDYHYQTMRSNADLLNLIQVGITLSDKDGHIPVSAPSTWQFNFKFDLN
KEMFSKESVDTLMTSGVDFAKLSMNGIIADDFAQCIIDSGLCLLPDVTWVSFHAGYDFGF
LISLLMNKEMPSSQQRFSQWASTYFPTFYDIKLISIAKVIGNGNIYKDRFSLEDLAQLLG
IHEADFNLLQVGEQSIIIQLCFNVLRHLLGNDILVSCKNRIWGLTDDVSTSISESNVKIN
TSLNSQEQSGGSSLQTPLQSLQTLLQQKQQEHIPIDGSQQMRKLLQSQGLLLNHGNNAND
PNLSNSIPSAQQDMLSPPNVPPPGILVDQKGILSPAMTYYNAV
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtctgaggtataactctcatattatgggaattcaagggcagagtcctgctgaa
gtactccgtcagcaacagcaaaatcaacaaatggctcaacaagcagcacttcaacatagt
ggagttggcacacagcaaaatcagttaggcgaagcatcagcttcatcaggtttacaaggt
gtacctctttcgatgatgatgtctccacaatttcaaggtaggggaaatataaacgtaggt
atgcaaggctcagcgcaacagacaccgcagcaacaacaacagctgtttcagcaggtgcag
cagcagcagatagccgctatttcagctcaaagacttgcacaacaacaacaacagcagcag
caacaacaagcacaagcgcaaaaacccaattacatgatttcgcccatagcgttacagcaa
cagcaaattcgcacacctcttcgttcacaggcagagcctcagctgcaacttcggcaactt
cagttacaacagcttaagcttaggcaacaacagcaacagcagccccaacaacagcaagaa
tttttaattcaaaattcaatgcagaaacaacatgatacatcggtgtcacctcttacagca
caaagctctgatacaagagtcaggcaagtttggagcgacaacttggagagtgaaatggca
ttgattagggaactagccggcgtgtacaacaatatatgtgtttcgacagagtttgctggt
attgttgcacgtccaatgggaacatttcgttccacgaaggattaccactatcaaactatg
aggtccaatgccgacttattgaacttaattcaggttggtattacattaagtgataaagac
ggccatattcctgtttctgctccttctacttggcagtttaattttaagtttgatctcaat
aaagaaatgttcagtaaagagtcggtggatacgttaatgacatccggtgttgactttgca
aaattaagcatgaatggaattatagcggatgactttgcacaatgcattattgatagcggg
ctttgccttttaccagatgtgacttgggtaagctttcatgcaggatacgattttggcttt
ttgatctccttgctcatgaacaaagaaatgccttctagccaacaaagattttcgcaatgg
gcttctacatattttccaacgttctacgatatcaaacttatttcaattgcaaaagttatc
ggaaatggaaatatttacaaggatcgtttttctttggaagatcttgctcagttgcttgga
attcatgaagcggactttaatctcctgcaagttggagagcaatcaattataatacaatta
tgcttcaatgtactgcgccatctgctaggtaacgatattttggtttcttgtaagaatcga
atctggggattgactgatgatgtctccacaagtatttctgaaagcaatgttaagataaac
acttctttgaattcgcaggagcaaagtggtgggtcatctctacagacaccacttcagtct
ttgcaaacgcttcttcaacaaaagcagcaagaacatattccaatagatgggagtcaacaa
atgagaaaactgcttcaatcgcaaggactgcttcttaatcatggaaacaatgccaatgat
cctaatctatcgaattcaataccatctgcacagcaagacatgctgtcacccccaaacgtt
ccaccacctggaattttagttgatcagaaaggtatattatcaccggctatgacatattat
aatgcagtttag
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