Brettanomyces bruxellensis: BRETT_003208
Help
Entry
BRETT_003208 CDS
T07183
Symbol
SHM2
Name
(RefSeq) Serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx00260
Glycine, serine and threonine metabolism
bbrx00460
Cyanoamino acid metabolism
bbrx00630
Glyoxylate and dicarboxylate metabolism
bbrx00670
One carbon pool by folate
bbrx00680
Methane metabolism
bbrx01100
Metabolic pathways
bbrx01110
Biosynthesis of secondary metabolites
bbrx01200
Carbon metabolism
bbrx01230
Biosynthesis of amino acids
bbrx01240
Biosynthesis of cofactors
bbrx04981
Folate transport and metabolism
Module
bbrx_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BRETT_003208 (SHM2)
09102 Energy metabolism
00680 Methane metabolism
BRETT_003208 (SHM2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BRETT_003208 (SHM2)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BRETT_003208 (SHM2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BRETT_003208 (SHM2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BRETT_003208 (SHM2)
Enzymes [BR:
bbrx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BRETT_003208 (SHM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
64575132
NCBI-ProteinID:
XP_041139511
UniProt:
A0A871RH03
LinkDB
All DBs
Position
9:3242411..3243823
Genome browser
AA seq
470 aa
AA seq
DB search
MSRDALSKEHRHMLTGHLKETDPEVADIIEDEIDRQRHSINLIASENFTSTSVFDALGSP
MCNKYSEGLPGRRYYGGNQNIDRMEMLCQSRALKAFRLDPDKWGVNVQALSGSPANLEVY
GAVMKPHERLMGLDLPHGGHLSHGYQTPTRKISAVSVYFETMPYRVDLKTERIDYDMLEK
TANLFRPKVLVAGTSAYCRLIDYKRMREIADEVGAYLMVDMAHISGLIAAGVIPSPFEYA
DIVTTTTHKSLRGPRGAMIFFRKGVRSVNPKTGKEIYYDLESRINFSVFPGHQGGPHNHT
ISALCTALKQAATPEFKEYQLQVLKNAKSLEYEFKKLGYHLVSGGTDSHMVLVSLREKGI
DGARVEAVCEKINIALNKNSIPGDRSAMVPGGVRIGSPAMTTRGANEGDFKRIVDYIDKA
VNFAKELQNNLPADAHRLKDFKRKLSEPSEELEQWRKEIYNWAGEYPLSV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgagcagagacgccctgtcaaaagagcatcgccatatgcttactggccaccttaaggag
actgatccggaggttgctgatattattgaggatgaaattgatagacaaagacattccatc
aatcttatcgcctccgaaaattttacatccacctccgttttcgatgctttgggatcacca
atgtgcaacaaatattctgagggtctcccaggtagaagatattatggtggcaatcaaaac
atagatcgtatggagatgctatgtcaatcccgtgctttgaaagcattcagattggatcct
gataagtggggtgtgaatgtgcaggcactttccggatcaccagctaatctggaggtttat
ggtgcagtgatgaagcctcatgaaagattgatgggtcttgatctcccacatggtggtcat
ttgtctcacggttatcagacaccaacaaggaagatttctgctgtttctgtgtactttgag
acgatgccatacagagttgatctcaagacggaaagaattgactacgatatgttagagaag
actgcaaacctgttcagaccaaaggtccttgttgccggtacatctgcttactgtcgttta
attgactacaagaggatgagagagattgccgatgaggttggtgcctacttaatggttgat
atggcacatatttctggtctcattgctgcaggtgttattccttccccatttgagtatgca
gacattgtcacgacaactactcataaatctctgaggggtccaagaggtgccatgatcttc
tttagaaagggggtcaggtctgtgaatccaaagacaggaaaggagatctactatgacttg
gagagccgcattaacttttctgttttcccaggtcatcagggtggtccacataatcacaca
atttctgccttgtgtacggctctgaaacaggcggctactccagagtttaaggagtaccag
ttgcaggttttgaagaatgcaaagtctcttgagtatgagttcaaaaagttgggctaccac
ctagtctctggcggtactgattctcatatggttcttgtttctttgagggaaaagggaata
gatggtgccagagtggaggcagtttgcgaaaagattaacattgctttaaataagaactcc
attcctggtgataggtcggctatggttcctggtggtgttagaattggttccccagctatg
acaactaggggtgcaaatgaaggggacttcaagagaatcgtcgattacatcgacaaagct
gtgaattttgcaaaggaattgcagaataatcttcctgcagatgctcataggcttaaggac
ttcaagcgtaagctctcagaaccttccgaagagttggagcagtggagaaaggaaatatac
aattgggccggcgagtatccattatctgtttaa
DBGET
integrated database retrieval system
