Brettanomyces bruxellensis: BRETT_003272
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Entry
BRETT_003272 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K10259
F-box and WD-40 domain protein MET30
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx04111
Cell cycle - yeast
bbrx04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
BRETT_003272
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
BRETT_003272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbrx04121
]
BRETT_003272
Ubiquitin system [BR:
bbrx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
BRETT_003272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_C
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_DCAF4
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_Nup120_160
Beta-prop_SPT8
F-box-like
Beta-prop_EIPR1
Beta-prop_EML
WD40_RFWD3
Beta-prop_RIG_2nd
ANAPC4_WD40
NBCH_WD40
F-box
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
WD40_like
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_WDR75_2nd
Beta-prop_IP5PC_F
KNTC1_N
Beta-prop_NOL10_N
L31
ARM_LIN
F-box_4
Motif
Other DBs
NCBI-GeneID:
64575196
NCBI-ProteinID:
XP_041139574
UniProt:
A0A871RLC5
LinkDB
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Position
9:3379323..3381428
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AA seq
701 aa
AA seq
DB search
MSDSVKQNGKIPPTLHRKTHVRSPDSQAEVSSNSITLGSSSLTKEAGLSTFGTGNKFTFT
SPTTKFAQMAMNLSAPCSSLPHNTNPTAPAIVPEHSMENNDNTNASHTTTHSHQPASRTE
SSVLTPFLNNHLITNPITTDSPVEEHHYCYRHDPHTQCNKAADEIEMTRIQKRLETLPHQ
DQEAISHVWSVFSAAPGQQRTLILQGLLTMCCFPQLSLISQEVSKLIRIDFVEALPNELA
LKVLCYLDCQSLCSAAQVSVKWKQMADDDRVWRHMCEQHIDRKCPQCGWGLPLMAVKRLR
ESSFVRKRKHDTALDELQNSLKHLPPPLDECKAITEKCRQVKRQRRTRPWKAVYSERFKV
ERNWRKGIYKIKKFEGHSDGVLCCQYDNNNLLMTGSYDKTIKIWNVETGKLLRTLTGHTR
GVRTLAFDEQKLISGGLDGTIKVWNYRTGQCISTYTGHSEGVISVDFHDKVIVSGSADST
VKVWHVDTRTCYTLRGHTDWVTSVKIHSKSKTLFTASDDATVRLWDLRTNKCLKVYGGVE
NNGHIGQIQCVIPFTVKDKLTTDLQEHANVPDSGEGNNQSENSNEENGKVDEALSGIPNL
PSHMLTASLDNTIKLWDVRTGKCIRTQFGHIEGVWSIAADTFRIVSGAHDRTIKVWDLQT
GKCMHTFGGHVSPISCVALGDSRIVCGSESGEVKMYCFDCS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagtgttaaacaaaacggcaaaataccacctactttacacaggaaaacccac
gtcagaagtcctgatagtcaagcggaagtcagcagtaattcaataactctgggctcttct
tcgctcactaaggaagcaggtttatccacatttggtacggggaataaatttacatttact
tcaccaaccacaaaatttgcccagatggcaatgaatctttcagctccgtgttctagtctc
cctcataataccaaccccacggcacctgcaatagtgccggaacactctatggaaaataat
gataataccaacgcatcgcatactacaacccattcgcaccaacccgcatcaagaaccgag
agttcggttttaaccccttttcttaacaaccacctaataacaaatccaataacaacagat
tctccagtcgaggagcatcattactgctaccgtcatgacccacatacccagtgtaacaag
gcagcagatgagatagaaatgacccgaattcaaaaaagattagaaacgttgccccaccag
gatcaggaggcgatttctcatgtgtggtccgttttttctgccgcaccaggtcaacaaaga
actttaatactacagggtcttttaacaatgtgttgcttcccacagctatcgcttatttct
caggaagtttccaaacttataagaatcgatttcgttgaagcccttccaaatgaactggca
ttgaaagttctttgctatttggattgtcaaagtttgtgtagtgccgcccaggtttctgtc
aaatggaaacagatggctgatgatgatcgtgtttggagacatatgtgtgagcagcatatt
gacaggaaatgtccccaatgtggatggggacttcctttaatggctgttaaaaggcttcgt
gagtcatcatttgtgcgaaagagaaagcacgataccgccttggatgaattacaaaactcg
ctgaagcatctacccccacctttagatgaatgcaaagcaatcactgagaaatgtcgtcaa
gtcaaacgtcaaaggcgtactaggccttggaaggcagtgtattcagagagattcaaagtt
gaacgtaactggagaaaaggcatttacaagatcaaaaagttcgaaggccacagcgatggc
gttctttgttgtcagtatgataacaacaatctgcttatgactggatcttatgataaaacg
atcaagatatggaatgttgaaacaggtaaactgctacgaactttaacaggacacacacgc
ggtgtcagaactcttgcctttgatgaacaaaagttgatatcaggtggcttggatggtaca
attaaagtttggaattacagaactgggcagtgtatatctacatatacgggtcatagcgaa
ggtgtgataagtgttgattttcatgataaggtcatcgtttcaggttcagcagattcaacg
gtcaaagtttggcacgtggatacaagaacttgctacactttacggggacacactgattgg
gtgacctcagtcaagatacattctaaaagtaagactcttttcaccgcctccgatgatgct
actgttcgactttgggatctccgcactaataaatgccttaaagtttatggaggtgttgaa
aataatggccacatcggccagattcagtgtgtcattccatttactgttaaggataagttg
actacagatctccaggagcacgcgaacgttccagactcaggagaaggtaacaatcaatct
gagaattccaatgaggaaaatggaaaagtagatgaagcattgagtggcatcccaaacttg
ccatcacatatgttgacggcctctttggataacaccataaagctttgggatgtccgtacc
ggaaagtgtatacggacccaatttggtcatatcgaaggtgtttggtcaattgccgccgat
acatttaggattgtcagtggtgcacatgatagaactatcaaggtttgggatttgcagaca
ggtaaatgtatgcatacctttggtggtcatgtttctccaatcagctgtgtggctttaggc
gattcgagaatagtatgtggttcggaaagtggagaagtcaaaatgtattgctttgattgc
tcgtga
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