Brettanomyces bruxellensis: BRETT_003289
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Entry
BRETT_003289 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K12586
exosome complex component RRP43
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRETT_003289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbrx03019
]
BRETT_003289
Messenger RNA biogenesis [BR:
bbrx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
BRETT_003289
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
64575213
NCBI-ProteinID:
XP_041139591
UniProt:
A0A871RH82
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Position
9:complement(3414911..3416107)
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AA seq
398 aa
AA seq
DB search
MSEMNGEKMKLTALSMKPSKLALVAPDVALEKYIQIGLRPSLRKFDEFRPVEVSFAGLST
YEKKKKSNKHSKIIGSSVVKCGPTVVVCSVSAGIVEDSQELTNDYRLKLDKGIIDAERDE
NGSIQANGPENASIYTVVEVSKGRNGPPLPEEMSVSQSLYDTILHSGLIKKSSLKIRLGL
KSKDKDGRPQIIRGEENDELIKEFAPSKTFSYVLYSKIQVYSPTGSLFDLCLISLLKALK
ETKLPEVYMTEKTAGTQISTNARSRDSINNGAFSSNLEQYNLLCDPKNSHHLEVQTKNLF
WPSTFGVVFNGVNGENKDAEGDLEMSQNKSLSSALLADPEGTAEEEATRKIKVLLDGQGN
IFGIEVIGGITESTVTKADIKRAIKISQIRAKVELKHL
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaatgaacggggagaagatgaagttaacagcactttctatgaaaccatcaaaa
cttgcactggtagcaccagatgtggcacttgaaaagtatattcagataggcttaaggccg
tctcttcggaaattcgatgaattcagacctgttgaagtttcatttgcaggactaagtact
tacgagaaaaagaagaaaagcaacaagcacagcaaaattataggatcatcagtggtaaaa
tgtggaccgactgttgttgtttgttctgtcagtgctggaatagtcgaggactctcaagaa
ctaacaaatgattacagacttaagcttgacaagggtataatagatgccgagagggatgag
aatggaagtattcaggcaaatggaccagaaaatgcttcgatctatactgtggtcgaagtt
tcaaaaggacgaaatggccctccattaccagaggaaatgagtgtgtcacagtcgttatac
gacactatattgcatagcggattgatcaaaaaaagtagtctaaagatcagactaggactt
aaatcaaaggataaagatggaaggccgcaaattataaggggcgaggaaaacgacgagttg
ataaaggaatttgctccatcaaaaactttcagctatgttctttattctaaaatccaggtg
tattcaccaaccggatcgctatttgatttatgccttatttcgttactcaaggctcttaaa
gaaacaaagctacccgaggtatacatgactgagaagactgctggcactcaaatttccaca
aatgcgagaagcagagacagtattaacaatggtgcttttagctcaaacttggaacagtac
aatttactatgcgatccaaaaaattctcaccacttggaagtacaaacgaaaaacttattt
tggccgtcaacatttggagtagtattcaatggagtaaatggtgaaaacaaggatgctgaa
ggggatttggagatgtcgcagaataaatccctgtcatcggctttgttagctgatcctgaa
ggaactgctgaggaagaagcaacaaggaagatcaaggtactactagacggacagggaaat
atatttggcatagaggtaataggaggaataacagaatcgacagttacaaaggcagatatt
aaaagggctattaaaatttcccagatacgggcaaaggttgagttgaaacatttatag
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