Brettanomyces bruxellensis: BRETT_003344
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Entry
BRETT_003344 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K14962
COMPASS component SWD2
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
BRETT_003344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbrx03019
]
BRETT_003344
03036 Chromosome and associated proteins [BR:
bbrx03036
]
BRETT_003344
Messenger RNA biogenesis [BR:
bbrx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
BRETT_003344
Chromosome and associated proteins [BR:
bbrx03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
BRETT_003344
COMPASS/SET1 complex (yeast)
BRETT_003344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
DUF4809
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
64575268
NCBI-ProteinID:
XP_041139646
UniProt:
A0A871R9K9
LinkDB
All DBs
Position
9:complement(3535151..3536251)
Genome browser
AA seq
366 aa
AA seq
DB search
MSLSSKVSLVENNDEHSIFTSRPKNTLSTRITTLDTLKAIHPSKVFKNGIIDTPLTSLSY
DDEGRYILTSGTDETLQLYEVPRGHHVKSIFSKKYGCDQAIFTHNSHTKCIFASTKENHI
LRLLNLNDNSFIRYFKGHDAQVVNLINSTSSTRSESFYSSSIDGTVKCWDLRVKGFTASL
GLHSIPLIALDPSNTVMAILEIQNYQINLVSMEKFPSGLIASKNIKDVLKKHSLTPVCIQ
FTNDNRYILVTTAELKHLVLDAYTLDLVVYLSGGIPFTERQYPDIGCLTVTPNSDYALSG
SGNGDILVWNLKNLQSGASSKTLAPSATINNKYSLSKGILPRMIKCNPRYEMLAAADTEL
SFWTST
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtccctaagttcaaaagtatcgctcgtggaaaacaatgatgaacattcgatttttacg
agtcgaccaaaaaacactttgtctacacgaatcacaactttagatacactaaaagcaatt
catccctcaaaagtatttaaaaatggaattatagatacaccattgacatcattatcatat
gatgatgaagggaggtatattcttacctcaggtacggatgaaacgttgcaattgtacgaa
gtgcccagaggccatcatgttaagtctatattttcgaagaaatatggatgtgatcaagca
attttcactcacaattcccacacaaagtgtatttttgctagtacgaaggagaatcatatt
cttcgacttttaaatttaaatgataattcattcataaggtatttcaaagggcatgacgca
caggttgtgaatttgataaattctacaagtagtacaagatccgagagtttttattctagt
tccatcgacggcactgttaaatgctgggatctcagggtgaagggatttactgcaagtctt
ggacttcactccatacctttaatagcacttgatccaagtaataccgttatggcaattctt
gaaattcaaaactatcaaataaatcttgtatcaatggaaaaatttccttctggacttatt
gcatcaaaaaacatcaaggatgtattaaaaaaacactccttaactccggtatgtatacag
ttcacgaacgataacaggtatatattggtcactacggcggaattaaaacatttagtcttg
gacgcgtataccttggatcttgtcgtgtatctttctggaggtattccttttacggaaaga
caatatcctgatattggatgtttaactgtgacaccaaacagtgattacgcattaagtggg
tcaggaaatggcgatatactagtatggaatttaaaaaatcttcagagtggtgcgtcatct
aaaacattggcaccatctgccactatcaataacaaatattcattaagtaaagggatattg
ccaagaatgataaagtgtaatcctagatacgaaatgctcgcagctgcagacacagaatta
tctttctggacatcaacttag
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