KEGG   Brettanomyces bruxellensis: BRETT_003524
Entry
BRETT_003524      CDS       T07183                                 
Name
(RefSeq) uncharacterized protein
  KO
K12600  superkiller protein 3
Organism
bbrx  Brettanomyces bruxellensis
Pathway
bbrx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bbrx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BRETT_003524
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbrx03019]
    BRETT_003524
Messenger RNA biogenesis [BR:bbrx03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     BRETT_003524
SSDB
Motif
Pfam: TPR_19 TPR_16 TPR_2 TPR_14 TPR_1 TPR_17 TPR_22 TPR_CcmH_CycH TPR_11 TPR_8 TPR_12 ANAPC3 HrpB1_HrpK TPR_9 DUF4817
Other DBs
NCBI-GeneID: 64575447
NCBI-ProteinID: XP_041135870
UniProt: A0A871QZM6
LinkDB
Position
6:152290..157056
AA seq 1588 aa
MSPKSLIRQARNALLSKDFEGAIDYCDEALEKDKEDYYALLIKGKALFSQDKQHIKEATK
LYKLACKIRPFDPSAWKGLIELDRETDNFKSFFEDVLGLAKAEEAQGQNLRLCVDLVDRY
MQKYSKNGDSNDSLHEYYYKQMIPGLSELGDFIGPMSGSPISKLDKLITLIAKREQVEIK
TKQDKLKFKMPAHLTSENRKVLDSAEYSIYEHSELPKLYNMALDFDISDNLRAIYEEQLL
KYKYQMLSVATDKKQAFHETYEMVSDMVLVHTHCKLAYDLYFDWTDFAQLEDLDMKVIAE
YIRLFGVSGLGAILYAYALSEVSPFDRKMFQEEMSEGKGKKKKGGKNKNKKKENTKKEST
KDAKDQKDVKGDDKKGDKKGDKKGDQKEDKKHYKKENKKHAKKEDTKDDKKEDIKDKKED
KKEDTKDDKKEDVKDKKEDIKDKKEDKKEDKDIESEDEDSQTLVNEEVLELMMAGIRLAK
QSILAHRILINFCIHLKNYQEALDYSRECVQITVRHSRLIGVPLPHSRLHSLLDLAIVYT
YYESPKNFAKAMDLYSSVLKADPQNIQAKIGKGLIFVENRNFKKAAGLLKDVVKENAENY
DACHEYGWCLIQLGRREEGRKWTKRAMEMVSGTDASSLNKRAIALWRLGESYLLDYREGE
DENEDKEKVKDGDKERGKDEEKVKVGKKEGEDKNEENKNEDEKGYAKEDKKEDEKENEEF
RKEENKHNKREENKDNKEEEKKNNKKINQHAAVRAAFDYFVKSLKQSPSYPPCYTSLGWL
LLKVYHNETKALRCFYKAFELDPSELEACRELVRHFSSRRDWEMVEVICTRVVAHEGARR
MLLAREVEDASWPYRMLGCSSLEQGDDSGAIGHFQNALRVAPGDTAAWAGLGEAYLRGGR
LEASAKVFAHVLEVCPGDWYARYLLAVAYKAMLRYGEALEQLQALSSGGHAAEKCVLTTL
YETLIARARHEVDGGFVGRSRDTIREAVGVLRRAYKVDRASQKLWKAVQDIFALCLEVES
GCEGVGVEILEGMIDEMNGENLGVSKGEGNNLKADRIEKRNISESNEINDTNISKSNSTY
PDINRLHSYNVLAAKIALRVLPASAAKPMRAGALYNEAVAYLGWGHRDSAIDSLRKAVQL
EPGNPEFWATLGAACITRSARVSQHCFIRAASLAPGAPDVWIGLGALCLTYRDFELAQRC
FARAQSLGPSTPAAWAGLALALHGLHDADQPARLLTHAYVLANGRAPLCALLYGLSVVRK
RVGCSPSERDLGAVQELTTAHAALRHYLRFRPSDVLASRLALTVMERIHAFDEGIRVFRR
ELDNYSGPRNNSDSAPYAMAQAQLARLYLGAGRYPEAAEAGDAAAEILAEDESMSGKSQK
SLMSSLAVSGLSLYFSGDFDASLAQLATVLDVFPDSSRLVVLIAQVLHASGRPDARQAAV
DELMKSIEKYGTSPLVASTVASIALVDRLDDLLPAAREELLLMPADARAADISCEIPGLV
DQIDRRLGLRAHSRLWQREAFLFPGQAAAWRHLDSRVALDVASQSGDTDSGVLAESYVRA
GTLREIQRGLFLDPGNVNGYRALRGCFA
NT seq 4767 nt   +upstreamnt  +downstreamnt
atgagtccgaaatcgctcataagacaggcaaggaatgcccttttatcgaaggatttcgag
ggtgcaattgactattgtgatgaagcactagagaaagacaaggaagactattatgccttg
ttaataaaaggaaaagcgcttttttcccaggataaacagcacataaaggaagctacaaag
ctgtataagcttgcctgtaagatccggccgtttgatccgtcggcttggaagggcttaata
gagctggatagagaaacagacaactttaagagcttttttgaagatgtgcttgggttggca
aaggcagaagaggcacaagggcagaatttgaggttgtgcgttgatcttgtggataggtac
atgcagaaatattcgaaaaacggggattcaaacgattcattacacgaatattactacaag
caaatgataccaggtctttctgagttgggagactttattggtccgatgagtggcagcccg
atatcaaagctagacaagttgattactctgattgctaaaagggagcaagtggaaatcaag
acgaagcaggataagctaaaattcaagatgccggcacatctcacgagtgagaatcggaag
gtacttgattctgcagaatattcgatatatgaacactcagaacttccaaagctttacaat
atggctttagactttgacatcagcgacaatcttagggcaatctatgaggagcagcttttg
aaatataagtatcagatgctttctgttgccacagacaagaaacaggcttttcatgaaaca
tatgagatggtgtcggacatggtgcttgttcacacgcactgcaagcttgcctacgatctt
tactttgattggaccgattttgcgcaattggaggatctggatatgaaggttattgcggag
tatatcaggttatttggcgtttcgggacttggtgcaatactttatgcttatgcattgtct
gaggtttcaccttttgataggaagatgtttcaggaggagatgagtgaagggaaggggaag
aaaaagaaggggggtaagaataagaataaaaagaaggagaatacgaagaaggaaagtaca
aaggatgctaaagatcagaaggatgttaagggtgatgataagaagggagataagaaggga
gataagaagggagatcaaaaagaagacaagaagcattataagaaagaaaataagaaacat
gctaagaaagaagatacaaaggatgataagaaagaagatataaaggataagaaagaagat
aagaaagaagatacaaaggatgataagaaagaagatgtaaaggataagaaagaagatata
aaggataagaaagaagataagaaagaagataaagacatagaaagcgaagatgaagattca
caaacactagttaatgaagaagttcttgaacttatgatggccggaatcagattagctaag
cagtcgattctagcccaccggatcctcatcaacttctgcattcatctgaaaaactaccag
gaggctttagattattctagagagtgcgtgcagatcacagtgaggcattcgagattaatt
ggggtgcctttaccacactctaggctacattctctgctagatttggcaattgtctacact
tattacgagtcaccaaagaattttgcaaaggcaatggacctctacagctcagttctcaag
gcagatccgcagaacatccaggcgaaaatcggcaagggattgatatttgtggagaatagg
aacttcaaaaaagcagctgggcttttgaaggatgtggtgaaggagaatgcggaaaactat
gatgcttgccacgagtatggatggtgccttattcagcttggtaggagggaggagggacgg
aaatggacgaagagggcaatggagatggtttcaggaacggatgccagttcgttgaataag
agggctattgctttgtggaggttgggggagtcttatttgcttgattatagggagggagaa
gatgaaaatgaggataaagaaaaagtgaaggatggggataaagaaagagggaaggatgaa
gaaaaagtgaaagtaggaaagaaagaaggagaagataagaatgaagaaaataaaaatgaa
gatgaaaagggatatgcaaaggaagacaagaaggaagatgaaaaagaaaatgaggaattc
agaaaggaagaaaataagcataataaaagagaagaaaacaaggataataaagaagaagaa
aaaaagaataataaaaaaattaatcaacacgctgcagttcgcgcggccttcgactacttc
gtcaaatcactgaaacaatcaccaagctacccaccgtgctacacctcgctgggctggctc
ctcctgaaagtctaccacaacgagaccaaggcgctgaggtgtttctataaggcgttcgag
ttggatccgtccgagctggaggcatgccgcgagctcgtgcgccacttcagttcccgcagg
gactgggagatggtcgaggtgatctgcacgcgggtggtggcccacgagggggcccggagg
atgttgctggcgagggaggttgaggacgcgtcgtggccgtaccggatgctaggctgctcg
agcctggagcagggcgacgactcgggtgccatcgggcacttccagaatgccctccgcgtg
gcgcccggggacaccgccgcatgggccgggttgggcgaggcgtacctaaggggcggccgg
ctcgaggcgtcggccaaggtgttcgcgcacgtgctggaggtgtgccccggcgactggtac
gcgcgctaccttctcgcggtggcctacaaggcgatgctgcgctacggggaggcgctggag
cagctccaggcgctttcttccggagggcacgctgcagagaagtgcgtgctcaccacgctg
tacgagacgctgatcgcccgggcccgccacgaggtggacgggggctttgtgggccgttcg
cgggataccatccgcgaggctgtgggggttttgaggcgcgcctacaaagttgaccgggca
tcgcagaaactttggaaggccgtgcaggatattttcgcgctttgcctcgaggtggagtcg
ggctgtgagggcgttggtgtagaaattcttgaggggatgattgatgagatgaatggggaa
aatttgggtgttagtaagggggagggaaataatttgaaggctgatagaattgaaaagagg
aatatttcagaatcaaatgaaataaacgacacaaatatttcaaaatcaaattccacatat
cccgacatcaaccgcctgcacagctacaacgtgctggctgcaaaaattgccctccgagtt
ctgcctgcatccgcggccaagccaatgcgcgccggtgccctctacaacgaggccgtggcg
tacctgggctggggccaccgggacagcgccatagacagcctccggaaggccgtgcagcta
gagcccggtaacccggagttctgggccacgctcggtgccgcatgcatcaccaggagtgcc
cgcgtgtcccagcactgctttatcagggctgcctcgctcgcccccggcgccccggacgta
tggatcggtctcggcgcgctctgtctcacataccgcgacttcgagctggcccagcgctgc
tttgcgcgcgcccagtccttgggaccgtcaaccccagccgcgtgggccggccttgcgctg
gcgctccacgggctgcacgacgcagaccagccggcgcgcctactaacgcatgcgtacgtg
ctcgccaacggccgtgcgccgctttgcgcattgctctacgggctttcggtcgtgcggaag
cgtgtcggctgctcgccatcggagcgcgatctcggcgccgtgcaggagctcacaaccgcg
catgccgcacttcgccactacctccggttccgcccgagcgacgttttggcctctcggctt
gcgctcaccgtcatggagcgcatccacgccttcgatgagggcatccgcgtgtttcggcgg
gagcttgacaattattccgggcctcggaataactcggactccgcgccctacgcgatggca
caggcccagctcgcaaggctctatctcggggctgggcggtatccggaggcagccgaggcc
ggcgatgctgcggcggaaattctcgcggaggatgaatccatgtcgggcaaatcgcaaaaa
tccctcatgtcgtccctcgcggtgtccgggctctcgctgtatttctccggggacttcgac
gcatcgctagcgcagctcgccacagtcctcgacgtgttcccggactcatcccgtcttgtg
gttttaatcgcccaggttttacacgcttccggtcggccggacgcaaggcaagctgccgtt
gacgaacttatgaaaagcatcgaaaaatatggcacgtcgccgctggtggcgtccactgtt
gcctcgattgccctcgtcgatcgacttgacgatcttttgcccgcggcccgcgaggaactt
cttctgatgcctgccgatgcacgggctgccgatatttcgtgcgagatcccaggcttggtc
gaccagatcgaccggcggctgggtctgcgtgcccacagccggctctggcagcgggaggca
tttttgttccctgggcaggcggccgcgtggcggcacctggactcccgcgtagcgttggac
gtggcctcgcagtccggggacactgactccggtgtgctggccgagtcctacgtcagggca
ggcaccctcagggagatccagcgggggctctttcttgacccaggcaacgtgaacggctac
cgggctctcaggggttgctttgcataa

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