Brettanomyces bruxellensis: BRETT_003524
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Entry
BRETT_003524 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K12600
superkiller protein 3
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRETT_003524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbrx03019
]
BRETT_003524
Messenger RNA biogenesis [BR:
bbrx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
BRETT_003524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_16
TPR_2
TPR_14
TPR_1
TPR_17
TPR_22
TPR_CcmH_CycH
TPR_11
TPR_8
TPR_12
ANAPC3
HrpB1_HrpK
TPR_9
DUF4817
Motif
Other DBs
NCBI-GeneID:
64575447
NCBI-ProteinID:
XP_041135870
UniProt:
A0A871QZM6
LinkDB
All DBs
Position
6:152290..157056
Genome browser
AA seq
1588 aa
AA seq
DB search
MSPKSLIRQARNALLSKDFEGAIDYCDEALEKDKEDYYALLIKGKALFSQDKQHIKEATK
LYKLACKIRPFDPSAWKGLIELDRETDNFKSFFEDVLGLAKAEEAQGQNLRLCVDLVDRY
MQKYSKNGDSNDSLHEYYYKQMIPGLSELGDFIGPMSGSPISKLDKLITLIAKREQVEIK
TKQDKLKFKMPAHLTSENRKVLDSAEYSIYEHSELPKLYNMALDFDISDNLRAIYEEQLL
KYKYQMLSVATDKKQAFHETYEMVSDMVLVHTHCKLAYDLYFDWTDFAQLEDLDMKVIAE
YIRLFGVSGLGAILYAYALSEVSPFDRKMFQEEMSEGKGKKKKGGKNKNKKKENTKKEST
KDAKDQKDVKGDDKKGDKKGDKKGDQKEDKKHYKKENKKHAKKEDTKDDKKEDIKDKKED
KKEDTKDDKKEDVKDKKEDIKDKKEDKKEDKDIESEDEDSQTLVNEEVLELMMAGIRLAK
QSILAHRILINFCIHLKNYQEALDYSRECVQITVRHSRLIGVPLPHSRLHSLLDLAIVYT
YYESPKNFAKAMDLYSSVLKADPQNIQAKIGKGLIFVENRNFKKAAGLLKDVVKENAENY
DACHEYGWCLIQLGRREEGRKWTKRAMEMVSGTDASSLNKRAIALWRLGESYLLDYREGE
DENEDKEKVKDGDKERGKDEEKVKVGKKEGEDKNEENKNEDEKGYAKEDKKEDEKENEEF
RKEENKHNKREENKDNKEEEKKNNKKINQHAAVRAAFDYFVKSLKQSPSYPPCYTSLGWL
LLKVYHNETKALRCFYKAFELDPSELEACRELVRHFSSRRDWEMVEVICTRVVAHEGARR
MLLAREVEDASWPYRMLGCSSLEQGDDSGAIGHFQNALRVAPGDTAAWAGLGEAYLRGGR
LEASAKVFAHVLEVCPGDWYARYLLAVAYKAMLRYGEALEQLQALSSGGHAAEKCVLTTL
YETLIARARHEVDGGFVGRSRDTIREAVGVLRRAYKVDRASQKLWKAVQDIFALCLEVES
GCEGVGVEILEGMIDEMNGENLGVSKGEGNNLKADRIEKRNISESNEINDTNISKSNSTY
PDINRLHSYNVLAAKIALRVLPASAAKPMRAGALYNEAVAYLGWGHRDSAIDSLRKAVQL
EPGNPEFWATLGAACITRSARVSQHCFIRAASLAPGAPDVWIGLGALCLTYRDFELAQRC
FARAQSLGPSTPAAWAGLALALHGLHDADQPARLLTHAYVLANGRAPLCALLYGLSVVRK
RVGCSPSERDLGAVQELTTAHAALRHYLRFRPSDVLASRLALTVMERIHAFDEGIRVFRR
ELDNYSGPRNNSDSAPYAMAQAQLARLYLGAGRYPEAAEAGDAAAEILAEDESMSGKSQK
SLMSSLAVSGLSLYFSGDFDASLAQLATVLDVFPDSSRLVVLIAQVLHASGRPDARQAAV
DELMKSIEKYGTSPLVASTVASIALVDRLDDLLPAAREELLLMPADARAADISCEIPGLV
DQIDRRLGLRAHSRLWQREAFLFPGQAAAWRHLDSRVALDVASQSGDTDSGVLAESYVRA
GTLREIQRGLFLDPGNVNGYRALRGCFA
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atgagtccgaaatcgctcataagacaggcaaggaatgcccttttatcgaaggatttcgag
ggtgcaattgactattgtgatgaagcactagagaaagacaaggaagactattatgccttg
ttaataaaaggaaaagcgcttttttcccaggataaacagcacataaaggaagctacaaag
ctgtataagcttgcctgtaagatccggccgtttgatccgtcggcttggaagggcttaata
gagctggatagagaaacagacaactttaagagcttttttgaagatgtgcttgggttggca
aaggcagaagaggcacaagggcagaatttgaggttgtgcgttgatcttgtggataggtac
atgcagaaatattcgaaaaacggggattcaaacgattcattacacgaatattactacaag
caaatgataccaggtctttctgagttgggagactttattggtccgatgagtggcagcccg
atatcaaagctagacaagttgattactctgattgctaaaagggagcaagtggaaatcaag
acgaagcaggataagctaaaattcaagatgccggcacatctcacgagtgagaatcggaag
gtacttgattctgcagaatattcgatatatgaacactcagaacttccaaagctttacaat
atggctttagactttgacatcagcgacaatcttagggcaatctatgaggagcagcttttg
aaatataagtatcagatgctttctgttgccacagacaagaaacaggcttttcatgaaaca
tatgagatggtgtcggacatggtgcttgttcacacgcactgcaagcttgcctacgatctt
tactttgattggaccgattttgcgcaattggaggatctggatatgaaggttattgcggag
tatatcaggttatttggcgtttcgggacttggtgcaatactttatgcttatgcattgtct
gaggtttcaccttttgataggaagatgtttcaggaggagatgagtgaagggaaggggaag
aaaaagaaggggggtaagaataagaataaaaagaaggagaatacgaagaaggaaagtaca
aaggatgctaaagatcagaaggatgttaagggtgatgataagaagggagataagaaggga
gataagaagggagatcaaaaagaagacaagaagcattataagaaagaaaataagaaacat
gctaagaaagaagatacaaaggatgataagaaagaagatataaaggataagaaagaagat
aagaaagaagatacaaaggatgataagaaagaagatgtaaaggataagaaagaagatata
aaggataagaaagaagataagaaagaagataaagacatagaaagcgaagatgaagattca
caaacactagttaatgaagaagttcttgaacttatgatggccggaatcagattagctaag
cagtcgattctagcccaccggatcctcatcaacttctgcattcatctgaaaaactaccag
gaggctttagattattctagagagtgcgtgcagatcacagtgaggcattcgagattaatt
ggggtgcctttaccacactctaggctacattctctgctagatttggcaattgtctacact
tattacgagtcaccaaagaattttgcaaaggcaatggacctctacagctcagttctcaag
gcagatccgcagaacatccaggcgaaaatcggcaagggattgatatttgtggagaatagg
aacttcaaaaaagcagctgggcttttgaaggatgtggtgaaggagaatgcggaaaactat
gatgcttgccacgagtatggatggtgccttattcagcttggtaggagggaggagggacgg
aaatggacgaagagggcaatggagatggtttcaggaacggatgccagttcgttgaataag
agggctattgctttgtggaggttgggggagtcttatttgcttgattatagggagggagaa
gatgaaaatgaggataaagaaaaagtgaaggatggggataaagaaagagggaaggatgaa
gaaaaagtgaaagtaggaaagaaagaaggagaagataagaatgaagaaaataaaaatgaa
gatgaaaagggatatgcaaaggaagacaagaaggaagatgaaaaagaaaatgaggaattc
agaaaggaagaaaataagcataataaaagagaagaaaacaaggataataaagaagaagaa
aaaaagaataataaaaaaattaatcaacacgctgcagttcgcgcggccttcgactacttc
gtcaaatcactgaaacaatcaccaagctacccaccgtgctacacctcgctgggctggctc
ctcctgaaagtctaccacaacgagaccaaggcgctgaggtgtttctataaggcgttcgag
ttggatccgtccgagctggaggcatgccgcgagctcgtgcgccacttcagttcccgcagg
gactgggagatggtcgaggtgatctgcacgcgggtggtggcccacgagggggcccggagg
atgttgctggcgagggaggttgaggacgcgtcgtggccgtaccggatgctaggctgctcg
agcctggagcagggcgacgactcgggtgccatcgggcacttccagaatgccctccgcgtg
gcgcccggggacaccgccgcatgggccgggttgggcgaggcgtacctaaggggcggccgg
ctcgaggcgtcggccaaggtgttcgcgcacgtgctggaggtgtgccccggcgactggtac
gcgcgctaccttctcgcggtggcctacaaggcgatgctgcgctacggggaggcgctggag
cagctccaggcgctttcttccggagggcacgctgcagagaagtgcgtgctcaccacgctg
tacgagacgctgatcgcccgggcccgccacgaggtggacgggggctttgtgggccgttcg
cgggataccatccgcgaggctgtgggggttttgaggcgcgcctacaaagttgaccgggca
tcgcagaaactttggaaggccgtgcaggatattttcgcgctttgcctcgaggtggagtcg
ggctgtgagggcgttggtgtagaaattcttgaggggatgattgatgagatgaatggggaa
aatttgggtgttagtaagggggagggaaataatttgaaggctgatagaattgaaaagagg
aatatttcagaatcaaatgaaataaacgacacaaatatttcaaaatcaaattccacatat
cccgacatcaaccgcctgcacagctacaacgtgctggctgcaaaaattgccctccgagtt
ctgcctgcatccgcggccaagccaatgcgcgccggtgccctctacaacgaggccgtggcg
tacctgggctggggccaccgggacagcgccatagacagcctccggaaggccgtgcagcta
gagcccggtaacccggagttctgggccacgctcggtgccgcatgcatcaccaggagtgcc
cgcgtgtcccagcactgctttatcagggctgcctcgctcgcccccggcgccccggacgta
tggatcggtctcggcgcgctctgtctcacataccgcgacttcgagctggcccagcgctgc
tttgcgcgcgcccagtccttgggaccgtcaaccccagccgcgtgggccggccttgcgctg
gcgctccacgggctgcacgacgcagaccagccggcgcgcctactaacgcatgcgtacgtg
ctcgccaacggccgtgcgccgctttgcgcattgctctacgggctttcggtcgtgcggaag
cgtgtcggctgctcgccatcggagcgcgatctcggcgccgtgcaggagctcacaaccgcg
catgccgcacttcgccactacctccggttccgcccgagcgacgttttggcctctcggctt
gcgctcaccgtcatggagcgcatccacgccttcgatgagggcatccgcgtgtttcggcgg
gagcttgacaattattccgggcctcggaataactcggactccgcgccctacgcgatggca
caggcccagctcgcaaggctctatctcggggctgggcggtatccggaggcagccgaggcc
ggcgatgctgcggcggaaattctcgcggaggatgaatccatgtcgggcaaatcgcaaaaa
tccctcatgtcgtccctcgcggtgtccgggctctcgctgtatttctccggggacttcgac
gcatcgctagcgcagctcgccacagtcctcgacgtgttcccggactcatcccgtcttgtg
gttttaatcgcccaggttttacacgcttccggtcggccggacgcaaggcaagctgccgtt
gacgaacttatgaaaagcatcgaaaaatatggcacgtcgccgctggtggcgtccactgtt
gcctcgattgccctcgtcgatcgacttgacgatcttttgcccgcggcccgcgaggaactt
cttctgatgcctgccgatgcacgggctgccgatatttcgtgcgagatcccaggcttggtc
gaccagatcgaccggcggctgggtctgcgtgcccacagccggctctggcagcgggaggca
tttttgttccctgggcaggcggccgcgtggcggcacctggactcccgcgtagcgttggac
gtggcctcgcagtccggggacactgactccggtgtgctggccgagtcctacgtcagggca
ggcaccctcagggagatccagcgggggctctttcttgacccaggcaacgtgaacggctac
cgggctctcaggggttgctttgcataa
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