Brettanomyces bruxellensis: BRETT_003574 Help Entry BRETT_003574      CDS       T07183                                  Name (RefSeq) uncharacterized protein   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism bbrx  Brettanomyces bruxellensis Pathway bbrx03013   Nucleocytoplasmic transport bbrx03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:bbrx00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     BRETT_003574    03015 mRNA surveillance pathway     BRETT_003574  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:bbrx03019]     BRETT_003574 Enzymes [BR:bbrx01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      BRETT_003574     5.6.2.5  RNA 5'-3' helicase      BRETT_003574 Messenger RNA biogenesis [BR:bbrx03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      BRETT_003574    mRNA cycle factors     Common to processing body (P body) and stress granule      BRETT_003574 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_30 AAA_19 SLFN-g3_helicase NPHP3_N nSTAND3 ResIII AAA_16 DEAD UvrD_C_2 PhoH Transp_Tc5_C Motif Other DBs NCBI-GeneID:  64575497 NCBI-ProteinID:  XP_041135920 UniProt:  A0A871QZR1 LinkDB All DBs Position 6:complement(278245..281256) Genome browser AA seq 1003 aa AA seqDB search MGIMTISHDYNAKEDVSAAQMSTSGHEDEMQSSASVSGTFETSSFAQSEPSTMAPTVRAD LHDIALPAYACAYCGCSSPQSVIQCTVCKRWFCNGQNGARGSHIVIHMTMSHHNSLALHP ESEMGDTPLECYKCGNKNVFSLGFVAAKEESVVVLLCRLPCAQTKQNPEWDMEHWQPLIE GRHLLPWLARPPQDDEMVSGVPGMKQISDLEAMWRESGQQAASDGRKIGSVDESGVEDAG GDAVEALEPVQLVYKDGFEYQRTFGPLVEAEANYFHRVKESKILKEIKVRWSVGVNKKKM ASFILPSYEFAEFKMAVGDEIRLSHEAVPELDAWQDSGYVVRLPGPSTEELTVQMRSKDA PMHVQQGFSAELVWKSVPYDRMQEALKRFALDQKSVSKYLYYKLLGKDQPAETFDVELPA RLSVSKELELNASQLNAVQTALRNPLTLIQGPPGTGKTVTSATIVYQLCRMRRSGKAKGK AKDKAKDKGGKDKGSTRKPPPVLVCAPSNVAVDHLTLQLARLGLRVVRVAARGWTCDQEE VEKCSLDSVVARTAGGRLRRLLRRREETGELSEQEYREYTSLVRAREAAVVTRAEVVCCT CVTAGSGQLPGHWAACTVLIDESTQATEPECLIPIARGARQVILVGDHQQLGPVIGDPRV RSLGLGQSLFERLILLGNTPVRLEVQYRMHPGLAEFSSNVFYEGSLHNGVSASQRSGAAS GFPWPISGSPLMFWACFGPEELSSSGVSYLNRTEATNCFKIVSRMFSAGVSPEQIGIVTP YEGQRHFISSYMLLNASPDITDALQHVEVVSVDAFQGREKDFIIFSCVRSNDFHQLGFLR DPRRLNVALTRARYGLIILGNPITLSRDRLWASLLHYYRDRGCLVEGQLGRMRVCSVRLG APAYARPSPRAQMYQKSNYRESDTATLVSCDASVLGGQENNPWPTIDQAEHYSYARKGNY GDQEQDSDDQEQDYGDQEQDSDDRASRSVIESFTNKFASEFTF NT seq 3012 nt NT seq  +upstreamnt  +downstreamnt atgggaattatgactatttcacatgattataatgcaaaagaggacgtttcggcggcgcag atgagcacctccgggcatgaggacgaaatgcaaagcagtgcaagcgtatcaggcacattt gaaacatcgtcgtttgcacaatcggagccatcgactatggcccccacggtgcgagccgat ttgcacgatatcgcactccctgcatacgcatgtgcgtattgtggttgcagctcgccccag agcgtgatccagtgcacggtgtgcaagaggtggttctgcaacgggcagaacggtgcaagg gggtcgcacatcgtgatccacatgacgatgagccaccataacagcttggcgttgcacccg gagtcggagatgggcgacacgcctttagagtgctacaagtgcgggaacaaaaacgtgttt tcgctgggcttcgtggcagccaaggaggagtcggtcgtggtgctcttgtgccgtctgccg tgcgcgcagacgaagcagaacccggagtgggacatggagcactggcagccgctcattgag gggcggcacttgttgccatggcttgcacggcctccccaggacgacgagatggtgtccggg gttcccgggatgaagcagatctcggacctggaggccatgtggcgtgagagcgggcagcag gcggcttcagacggccggaagattggaagtgtggatgaatctggcgtcgaggacgccgga ggggatgctgtggaggcactggaaccagtgcagttggtgtacaaggacgggttcgagtac cagcggacgttcggcccgttggtggaggcggaggcgaactacttccaccgagtgaaggag tcgaagatcttgaaagagatcaaggtgcggtggtctgtgggcgtgaacaagaagaagatg gcgtcgttcattttgccgtcgtacgagttcgcggagttcaagatggcggttggcgacgag atccggctgtcgcacgaggccgtgccagaattggacgcctggcaggactccgggtacgtg gtgcgtctgcccggcccgtcgacggaggagctgacggtgcagatgcggtcgaaagacgcg ccgatgcacgtgcagcaggggttctcagccgagctcgtgtggaagagcgtgccgtacgac cggatgcaggaggcattgaagcggttcgcgttggaccagaagtctgtgtccaagtatctt tactacaagttgcttggtaaggatcagcccgccgagacttttgatgtggagttgcccgcg cgtctttcggtgagcaaggagctggagttgaatgcctcgcagctgaatgccgtgcagacg gccttgcgaaacccgctcacgctcatccaggggcctcctggtacgggaaagacggttacg tctgccacgatagtgtatcagttgtgtcggatgcggcggagtggtaaggctaagggtaag gctaaggataaggccaaggataagggggggaaggataaaggtagcacacgcaaacctccc ccggtgctcgtgtgtgcaccgtcaaacgtggctgtggaccacttgacgttgcagcttgca cggctcgggctccgcgtggtgcgtgtggcggcacgcgggtggacgtgcgaccaggaggag gtggagaagtgtagtttggacagcgtggtggcgcggacggcaggcgggcggctccggagg ctgctgcgccggcgggaggagaccggggagctttcggagcaggagtaccgggagtacacg tcgctggtgagggcccgggaggcggcggtggtgacacgggcagaggtggtgtgctgcact tgcgtgacggcgggcagcgggcagctaccgggccactgggcggcgtgcacggtgttgatc gacgagagtacgcaggcgacggagccggagtgcctgatcccgatcgcccggggcgcccgg caggtgatcctggtgggagaccaccagcagctcggtcccgtgatcggcgacccccgggtt cgcagcctgggtctgggccagtcacttttcgagcggctgatcttgcttggcaacaccccg gtccgcttggaggtccagtaccgcatgcacccggggcttgcggaattctcgtcaaacgtg ttttacgagggctccttgcacaacggcgtgtccgcttcgcagcgctccggggctgcttcc gggttcccctggcctatctccggttccccactcatgttttgggcctgcttcggcccagag gagctctcatcctccggcgtgtcctacttgaatcgcacagaggccacaaactgcttcaaa atcgtctcgcgaatgttttctgccggcgtgtcccccgagcagattggcattgtgacaccc tacgagggtcagcgtcacttcatctcctcgtacatgctgcttaatgcctccccggacatc accgacgccctccagcacgtcgaggtggtctccgtggacgcgttccagggccgcgagaag gacttcatcatcttctcgtgcgtccgatccaacgacttccaccagctcggctttctccgc gacccccgccggctcaacgtcgccttgacccgtgcccgttatggcctcatcatcctcggc aaccccatcacactctcccgcgaccgcttgtgggcttcgctcctccactactaccgggat cgaggctgccttgtcgaggggcagcttggccgcatgcgtgtgtgctccgtgcggcttggg gccccagcctatgcccggcccagcccacgtgcccagatgtaccagaaatccaactaccgc gagtccgataccgctactttggtttcttgcgatgcctctgttctgggaggccaggaaaac aacccctggccaaccatcgaccaggctgagcactattcttacgcccggaagggcaattat ggtgaccaggagcaagattccgatgaccaggagcaagattatggtgatcaggagcaagat tctgatgatcgggcctcccgaagtgtcatcgagagcttcaccaacaagtttgccagcgag tttactttttga

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