Brettanomyces bruxellensis: BRETT_003957
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Entry
BRETT_003957 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BRETT_003957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbrx03041
]
BRETT_003957
Enzymes [BR:
bbrx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BRETT_003957
Spliceosome [BR:
bbrx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
BRETT_003957
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
WHD_HA2
DEAD
AAA_22
nSTAND_NTPase5
T2SSE
Cas3-like_C_2
DUF6985
nSTAND3
AAA_19
Motif
Other DBs
NCBI-GeneID:
64575880
NCBI-ProteinID:
XP_041136296
UniProt:
A0A871R0T6
LinkDB
All DBs
Position
6:complement(1202218..1205091)
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AA seq
957 aa
AA seq
DB search
MSNIKSGQFKRRKRNSAANEWTDQDKKEEITADHQAPADKPDDTIKVVEKETKHKDEDES
ILFPNRISQDDEHDRDNTKGETGPDVNFEQLRLKSRQKYLSEREKKEMVLLREELKDFER
DIEKLGWGNMSEQERHEYEIKKEILSIFDRRSRLEEEEERGGGSFLIEDDYVNEEGRIDT
KRKGDVLAGKNRRMQFLLDEEHGKKHNRLKQLSHFTNLKKNDKQHEEKTYDYVFDQAQAV
DFTGGDEEDDVDSKLTADEKALWEKIRQEEERVKTIEDTRKSLPVFQYRDQLIEAVKKYP
VLIVVGETGSGKTTQLPQYLYEAGFDKGPLGKKVARKDGQKFKIGCTQPRRVAATAVASR
VSDEVGTRVGDRVGYSIRFDDRTSEKTVIKYMTDGMLLREFMSDPDLSEYSVMMVDEAHE
RTLHTDILLGLLKELSSERPEFRLLISSATMDSEKFSAYFNNAPIFNVPGRRFPVSIHYT
MQPEANYLHAATTTVFQIHFSQKEGDILVFLTGQDEIETMAANLRATCEKLAGQMERQLI
ICPIYANLPQEQQKLIFMKTPANARKVVLATNIAETSLTIDGIANVIDCGFVKEDRYSPV
TGIQSLAVVPCSRASADQRAGRAGRTGPGKCFRLYTRWSYMNEMAATPTPEILRTNLSGV
VLQMESLGITDLLHFDFLDSPSPEALIKALEQLYSLGALNEKGELTRTGAKMAELPCDPM
LARCLLASSSLNCCTEVVSVISMLEESNSIFSGRTSRKAGENPSAQPSAATSAEKFRTRA
DARLGGDHLTLLEIWNQFATNGFSPQWCRDNFIQYRAMNRARNVRNQLARLCRKMNIYGE
EEIEGQNGADSMIRMESMSRDERDRLKVRIMKSFARGFFANAAKLSRSGDYYQTLKKHQP
VYVHPSSALFRMVPPPKYVIYNELMLTSKEFMRNCMPVSERWLGEYAPHYYRSSGGK
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatataaagagcggccagtttaagcgacgaaaaagaaattcagcagcaaacgaa
tggacagaccaagataagaaggaggagataactgcagatcatcaggcaccagctgataag
cctgatgatacgataaaggtggtggaaaaagagactaaacacaaggatgaagatgaatcg
atactgtttccgaatagaataagccaagatgacgagcatgatagggataatacgaagggt
gagactggtccagacgtcaattttgaacagcttagactaaaatctaggcagaagtatcta
tcagagagagagaagaaggagatggtgttgctaagagaagaactaaaggattttgaaagg
gacattgagaaattgggctggggcaacatgtctgagcaggagcgtcacgaatatgaaatt
aagaaagagatcctatcgatttttgacagaagaagccgattggaggaggaggaggaaaga
ggaggtgggtcttttcttatcgaggatgattacgttaacgaggaaggccgaattgacacg
aaacggaaaggtgatgtcttggcgggcaaaaatcgacgaatgcaattcctattggacgag
gagcacggcaagaaacataatcggttgaagcaactctcgcatttcacaaatctaaaaaag
aatgacaagcagcacgaagagaagacctacgattatgtctttgaccaggcacaggcagtc
gattttacaggcggtgatgaggaagatgatgttgacagtaagttaactgcagatgaaaag
gcattgtgggagaaaatacgacaagaggaggaacgagtgaagacgattgaagatacaagg
aagagtcttccggttttccagtatcgcgatcagctaattgaagcagtgaaaaagtacccg
gtgcttattgtggttggagaaacgggatcgggaaaaaccacgcagcttccgcagtatcta
tatgaggctgggtttgataaaggccctctagggaagaaagttgcgagaaaagatggacag
aaattcaagattggatgtacacagccaagaagagtggcagctacagcagttgcatctcgt
gtttcggatgaggtcggaacgagagtgggtgaccgggttggctacagcatacgatttgac
gacaggacaagcgagaaaacagtgatcaagtacatgacggacggtatgctcttgcgggag
ttcatgtctgatccggatctctcggagtactccgtgatgatggtagacgaggcacacgaa
agaacactgcacacggatatactattggggctcttgaaagagctctcatcggagaggccc
gagttccggttgcttatttcgtcggcgacgatggactcggagaagttcagtgcgtatttc
aacaatgcaccgatattcaacgttccaggtcgccgttttcccgtctctatccactacacg
atgcagccagaggccaactacttgcacgcggcaaccacaacggtgtttcagatccatttt
tcgcagaaggaaggcgatatcctcgtttttttgacgggccaggacgaaatcgagaccatg
gcggccaacttaagagccacgtgtgagaagcttgccgggcagatggagcggcagttgata
atttgcccgatatacgcaaatctcccccaggagcagcagaaactgatcttcatgaagacc
ccggcaaacgcacgcaaggtggtgttggccacaaatatcgccgagacgtctctcacgatc
gacgggatcgcaaatgtgatagattgtggattcgtcaaggaggacagatacagcccagtc
accggaatccagtctctcgccgtggttccatgctcacgagcctcagcagaccaaagagca
ggccgtgcaggccgtacggggcccggaaaatgcttccgactctacaccaggtggtcgtac
atgaacgaaatggcggccacaccgaccccggagatactccgcacgaacttgtccggggtg
gtcttacaaatggagtctctaggcatcacagacttgctccacttcgacttcttggactct
ccatcgccagaggcactcatcaaggcactcgagcagctttattcgcttggtgcgttgaac
gaaaagggtgaattgacgcggactggtgcaaagatggccgaactaccctgcgatccgatg
cttgcaaggtgcctgcttgccagttcgagcctgaactgttgcactgaggttgtttctgtg
atttcgatgctcgaggaatcaaactccatcttttccggacgcacgagcagaaaagctggc
gaaaacccgtcggcacagccgtcggcagccacaagtgccgagaaatttcgcacgagagca
gatgcccgattgggcggggatcatttgactctcttggagatctggaaccagtttgcaacc
aacgggttttccccgcagtggtgccgggacaattttatccagtaccgggcgatgaaccgc
gcccggaacgtgagaaaccagctcgcgaggttgtgcagaaagatgaatatttatggggag
gaggaaattgaagggcagaatggggcagacagcatgatcaggatggaaagcatgtcccgg
gacgagagagacaggcttaaagtgcgtatcatgaagtcgtttgcccggggcttttttgcc
aatgctgccaagctcagcagatcgggtgattactaccagactttgaagaaacaccagccc
gtgtacgttcatccgtcatcggcactattcaggatggtgccccctccgaaatacgtgatt
tacaacgaattgatgctcacctcgaaggaattcatgcggaactgcatgccggttagcgag
aggtggcttggggagtatgcgccacactattacaggtcgagtgggggcaagtaa
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