Brettanomyces bruxellensis: BRETT_004003
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Entry
BRETT_004003 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bbrx
Brettanomyces bruxellensis
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbrx03016
]
BRETT_004003
Enzymes [BR:
bbrx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BRETT_004003
Transfer RNA biogenesis [BR:
bbrx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BRETT_004003
Prokaryotic type
BRETT_004003
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
64575926
NCBI-ProteinID:
XP_041136342
UniProt:
A0A871R268
LinkDB
All DBs
Position
6:complement(join(1296036..1297416,1297533..1297765))
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AA seq
537 aa
AA seq
DB search
MQIKEDTEIKATGDAQQTNDQQTSAAEKNITSPKHETNVDDREQEGSRRDPSNRWLRTRK
SDYDLPDAKRHKGEFKDKRALTSDGKPMFPNEKRKPKKKVACLIGYCGAGYHGMQINPPN
KTIEGDLFKAMVDAGAISKNNSNDLKKSGFMRAARTDKGVHAAGNVISLKMIVEDEDVVE
KINQALPEQIRVWGYQRVNKSFDCRKMCSSRIYEYLMPTYSFLPPRLNSPLYKLVKRMQA
DHPENIRVDADGEKFWVDLLGKLEAAGIDQNQLDQITEANREDIPLTVPLQIASETVKKF
SGEAREKYRIKKEKLDVFRDTMKLYEGSHNFHNFTNGKDFRDPSAKRYMKNITVSEPFVI
GNLEWVSIKIHGQSFMLHQIRKMIGLASLIVRTGCPIDKIRESFRMPKVNIPKAPALGLL
LERPVYDGFNEKLKSYGHDPITFDKFTDKMEAFKKKFIYSKIYEQEESEHTFHGFFGFID
YFTGNEASNQGLAIFDFVTQGEINGEIKNDAKETGEKADEKIENTENVENKPEDKTE
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgcaaataaaagaagacacagaaataaaggcgacaggagatgctcaacaaacaaatgat
caacagacttctgccgctgagaagaatattacttcgccaaaacatgagacgaatgtcgat
gacagggaacaagaaggctcaagaagggatccctcgaacagatggcttagaacaaggaaa
agcgattacgatctcccagatgcaaaacgacacaagggtgaattcaaggacaagcgtgca
ttaacatctgatggaaaaccaatgttcccaaatgagaagaggaaacctaagaagaaggtt
gcatgtctgattggctattgcggtgctggatatcacggtatgcagatcaatcctccgaac
aaaacaattgaaggagatcttttcaaggcaatggttgatgcaggagcaatttcgaaaaac
aactcgaatgacttgaagaaatctggctttatgcgtgcagcaagaacagataaaggagtt
catgctgccggtaacgttatttccctgaagatgattgttgaagatgaagatgtggttgaa
aagatcaatcaggctctaccagagcagataagagtttggggatatcagcgagtcaacaaa
tcttttgactgcagaaaaatgtgctcttctcgtatatacgagtatctcatgccaacatat
tcatttcttcctccacgtttgaactcgccactttataagctggttaagagaatgcaggcg
gaccatccagagaacattagggttgatgcagatggggaaaagttttgggtggacttgtta
gggaagttggaagctgctggaatcgaccagaatcaactggatcagattactgaggccaac
agagaggacatcccacttacagttcctcttcaaattgcctcggagaccgttaagaagttt
tcaggtgaagccagagagaagtacagaatcaagaaagagaagttggacgtattcagagat
accatgaagctatacgagggatcgcacaacttccacaatttcaccaacggcaaggatttc
cgtgatccttcggcaaagagatacatgaagaatataacggtaagcgaaccatttgttatc
ggcaatctggaatgggtctcgattaagattcatggtcagtccttcatgctccaccagatt
agaaagatgatcggtcttgctagtttaatcgtgagaaccggttgtccgatcgataaaatt
agagaatcgttcagaatgcccaaggtgaatattccaaaagctccagctcttggattactt
ttggaaagaccagtttatgatggatttaatgagaagttgaagagctatggtcacgatcca
attacgttcgataagttcaccgataagatggaggctttcaagaagaagttcatctactcc
aagatttatgagcaggaggaaagcgagcacacattccatggattctttggcttcatagat
tactttaccggtaatgaggcatccaaccaaggtttggctattttcgactttgttacacag
ggggagattaatggtgagatcaagaatgatgccaaagagacaggtgagaaggcagatgag
aagatagagaatacagagaatgtggagaacaaacctgaggataaaacagaatga
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