Brettanomyces bruxellensis: BRETT_004129
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Entry
BRETT_004129 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
bbrx
Brettanomyces bruxellensis
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bbrx03009
]
BRETT_004129
04121 Ubiquitin system [BR:
bbrx04121
]
BRETT_004129
Enzymes [BR:
bbrx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
BRETT_004129
Ribosome biogenesis [BR:
bbrx03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
BRETT_004129
Ubiquitin system [BR:
bbrx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
BRETT_004129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ltn1_1st
LTN1_E3_ligase_6th
UBC_like
zf-RING_2
zf-ANAPC11
zf-rbx1
FANCL_C
zf-C3HC4
zf-RING_16
zf-C3HC4_2
zf-RING_UBOX
RINGv
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
64576052
NCBI-ProteinID:
XP_041135401
UniProt:
A0A871R584
LinkDB
All DBs
Position
5:238521..243080
Genome browser
AA seq
1519 aa
AA seq
DB search
MGFGFTSGYQAEADLGLGTNGFEVSLNYITGVPDPNALQSTELQLLFRGLQKHDSITREK
SIAKLFDRISHNPSIIKNDIAIISWCQMYPMLGIDESRKVRTFSHKVQSQYVRILQKKFY
KYLRDTIGVWLSGLFDADRSTSKLCKQDLYATFNNDQAKLDGLWKIFTDQITNYVFQVIT
LESQDTISDERFIDKDESRAKYHRVLLSTILLFSDLLSRIRSESINVTKDTKTKILSLFT
NSAYLSIFSTKDPLLKKAIYQTIRLFLSANENGEFAADSNYFDKLSSAAVKGLKINKKQN
SALYSGSILAILDALTVLTKRKSAFWLTARKAEPNLLDTLRLGSLGSNPLYYDIVYTLLT
LLPYDFLPIKKYDKVKLYLGILETDVENEKLPGFKVNAFKTYMNFVHKVYSALEDDSQTL
LINRVACLLVKILDSPRHLSNCMLALMKNLKVYQNDDADILLDINSAILDALPSGLIEYA
SLKYKIVHQKEFCQNFISLLQENESDLLLELITNSVESLRDETDEYPTLALDIIDIYIKM
NINQAKNIIANSIPLIDSFITKGNPELVFGILLDYWNSNLFDSLSVSKAVDAEFISLQKT
TSESLVLNNLSHIKDFQVEDAPNIKEYLLDHTARNKQTEENDETLFKVLNPEILERLYVQ
SVLHTNTPSFVRKCEEYYQDIPMITFSTSNNEFLVYLIKTQESESSKKLLDLLLKHINED
SFMHAYLDALKVAFSESPGDSLIRSNLDVLDVETLSKYIPKSLVSEIEELIPRSPTTELT
VSNIFGTSLYLFLDSQESLEFKNLKKLNELLFYAEVLRGKADLLLSNFDLATDVMLLLEI
ISDCSFLSSEPYNAHNTFQRFRDEYLDGFFNSCSLESIFAKDLIVQGHCQYLEKLLESKN
NCIQFYTYRVYARVASFVYDKSPSRLGISDASLKFIASDQRRMTVLLLCDRDIIQSDKLF
TYRNRIAASIIGIRSTEDILGSGLKSLLLINLMLSSKFIDSKPLFPPQRFMMMLNTLTAW
LDCDISYDTEFTAVRIALFEFATYYLINAQDINVSVLPQETKDRVSELIMRVCTESLDML
VADKQPVELSYFTLRLVKTFFAKCDETVLSEYQEDIQKGVVEYLFNLLDIQNANGPLLMV
LDILTFLLNNHVPLKLFRPKYANLFEYLVSPVVKIQRLSVSMICKLLPQVQDKLVVDTSL
DKELINDVKIPQTLIDRAYDFSDSDTLTYLWNWYLILKHFPSITQELKDRYIEQLSEGLI
YNSLALLVDYIDVGTFKFPEGSSFEYVSNYSVDLDGDSLDKKSEKRKLEVNLLYMMMRFI
GGSVVRKWFSSIRDIQLKNRLNTFIATYISPILIDDILDSLSLRDVTEDDKFKLKMNKTV
HEVTCSCEIDDQTMEILISLPADYPLSQISVRGLSRVGIKEKKWQAWIRSFQYMINFQNM
SIMDAVKHFKENVDSKFAGYEDCAICYSIINAVDHSTPNKVCPTCHHNFHSACLYRWFKS
SGQSTCPLCRSSFSFKKHH
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgggttttggtttcacatctggataccaggcagaggcagatttgggacttgggacaaat
ggatttgaagtctctctcaattatataactggagttcctgatcccaacgctttacagtca
actgaactgcagttgctatttagagggcttcaaaagcatgatagcataacaagggagaaa
tccattgcaaagctttttgaccgaatatcgcacaatccttccattataaaaaatgatatc
gccattatttcttggtgtcagatgtatcccatgcttggaatagatgagtcaaggaaagtg
aggactttttcgcacaaagtacaatcccaatatgtgaggattctccaaaagaagttttat
aagtatcttcgtgacacaattggagtatggctttctggattgttcgatgctgaccgatct
acatctaaactatgtaagcaagatctttatgccacgtttaataacgatcaggcaaaatta
gatggcttatggaaaatcttcacagatcaaatcacaaactatgtgtttcaagtaatcaca
ctagaatcacaagatactatttccgatgagagatttattgataaggacgagagtcgtgca
aagtaccatcgtgttcttttatccactattttactcttttccgatctgttaagtcggata
cgctcggagagcataaatgtgacaaaagataccaagacgaagattctttcactttttacc
aattcggcgtatctttcaatcttttccaccaaagatcctcttcttaaaaaagcaatatac
caaaccattcgattgtttttatccgcaaatgaaaatggtgaatttgccgccgattcaaac
tactttgataagctatcttcggccgctgttaagggcttaaagattaacaagaagcaaaat
tctgcattatattctggttcgatacttgcaattcttgacgcacttactgtgttgactaag
cgcaaatctgcattttggcttactgctagaaaagcggagccaaatcttcttgatacacta
cgtcttggatccttgggatcaaatcctctatattatgacattgtttacacattattaacc
ttacttccatacgactttttaccaattaaaaaatatgacaaggttaagctttatttagga
attttggagactgatgttgagaatgagaaattaccgggatttaaagttaacgcattcaaa
acatatatgaatttcgtgcacaaggtttactctgcattggaggatgatagtcagacactc
ttaataaatagagtagcatgcctgcttgtgaaaattcttgattctcctcgtcacctttca
aattgtatgctcgctcttatgaagaatttaaaagtttatcaaaatgatgatgccgatata
ttgttagacattaattccgcaatcctagatgcattaccttcagggcttattgagtatgct
tctttgaagtacaagattgtgcaccaaaaagaattttgtcaaaactttatttcgttattg
caggaaaatgaatctgatcttcttttagaattaattaccaactcggttgagtctttacgt
gatgaaactgacgaataccctaccttggcacttgacatcattgatatatatatcaagatg
aatatcaatcaggctaagaatattattgctaattccatacccttaatagactcatttatt
acaaaaggaaatccagaattggtctttggtattcttcttgattactggaactcgaattta
tttgactcgctatcagtttctaaagcagttgatgctgaatttatttctctgcagaaaaca
acaagcgagagtcttgttttaaataatcttagtcacatcaaagattttcaagttgaagat
gctcccaatatcaaggagtatcttttagatcatacagctaggaataagcagactgaggaa
aatgatgaaacgcttttcaaagttttgaatccggagatacttgaaagactttatgtgcaa
tcagtacttcacacaaatactccttctttcgtgaggaaatgtgaagagtattatcaagat
ataccaatgattacgtttagtacctcaaacaatgaatttcttgtctacttgatcaaaact
caagaaagtgaaagctcgaagaaacttcttgatttgttactaaagcatattaatgaggat
tcattcatgcatgcgtaccttgatgctttaaaagttgcattttcagagtccccaggggat
agtttaattagaagtaatttagatgtcttggacgtggaaactttgtcgaagtacatacct
aaatcacttgtttctgagattgaggaacttataccacgttctccaaccacagaattgact
gtttctaatatattcggcacatcattatacctatttttggactcgcaagagagtttggaa
ttcaagaatttgaagaaactaaacgaactattgttttacgctgaagttttaaggggcaag
gcggatctactgttgtctaattttgatttggctacggatgttatgctgcttttggagata
atatctgattgttcatttttatcgagtgaaccatataatgcacacaatacattccaacgc
tttagagatgaatatcttgacggtttcttcaattcctgctctttagagagcatttttgca
aaggatttaattgttcagggacattgtcagtatcttgaaaaacttcttgaatcaaagaat
aactgtattcagttttacacatatagagtatatgcaagagttgcaagctttgtttatgat
aaatcgcctagtcgtttgggcatatctgacgcatcattgaagtttattgcgtctgatcaa
agaaggatgactgtgctacttctttgtgatcgggacatcatacaatcagataaactgttt
acctacagaaatcggatagctgccagtatcattggtataaggtcaacggaggatatttta
gggtcgggtttaaagtcacttttactgattaacttgatgctatcctcaaagttcattgat
agcaagccgcttttccctcctcaaagatttatgatgatgttgaatacgttgacagcttgg
cttgattgtgatatttcctacgataccgagtttactgcagtgagaatagctctttttgaa
tttgcaacatattacctaataaatgctcaagatataaatgtttctgttcttccgcaggaa
actaaggacagggtaagcgaacttattatgagagtttgtacagagtcattggatatgctt
gttgcagataagcaaccagtagagctttcgtactttactctccggctagtcaagacgttt
tttgctaagtgcgatgagactgttctttccgagtaccaagaagatatacaaaagggagtg
gtcgaatatttgtttaatcttcttgacattcagaatgccaatggacctttgcttatggtg
ctagatattttgacctttcttttaaacaatcacgtaccattgaaactttttcggcctaaa
tatgctaatttgtttgaatacttggtttctcctgttgtgaagattcaacggctatccgtt
tcaatgatctgcaagcttcttcctcaagtacaagataaacttgttgttgatacctcactt
gataaggagttgataaatgatgtgaagattccgcaaactctgattgaccgtgcctacgat
ttttctgatagtgatacgcttacctatctttggaattggtatttaattttaaagcatttt
ccttccataactcaggagttgaaggacagatacattgagcaattgagtgaggggttgatt
tataatagtttagctttgctagtcgactacatagatgtgggcacgttcaaattcccagaa
ggatcgagttttgagtatgtcagcaattactctgtggatcttgatggtgattctttggat
aagaagtcggaaaagagaaaattggaggtgaatctcctctacatgatgatgcggtttatt
ggtggaagtgtcgtccgtaaatggttttcttccatcagggacattcagctcaaaaatagg
ctcaacacgttcattgcaacatacataagcccaattcttatcgatgatattcttgattcg
ttgagtctgagagatgttactgaagatgataagtttaagttgaaaatgaacaagacagtt
cacgaagtgacctgttcctgtgaaatcgatgatcaaacaatggaaatattgatttccctc
ccagctgattatcctctttcccaaatatcggtaaggggattgtccagagttggaattaaa
gaaaagaaatggcaagcttggataagatccttccagtatatgatcaacttccaaaacatg
tcaatcatggatgcagtgaaacatttcaaggagaacgtggactccaagtttgccggatat
gaggattgtgctatttgctactcgatcatcaatgcagttgaccactccactccaaacaag
gtttgcccaacgtgccatcataatttccactcagcttgtttatacagatggttcaagagt
tcgggtcaatcgacatgtccactgtgcagaagcagcttctcatttaaaaagcatcattag
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integrated database retrieval system
