Brettanomyces bruxellensis: BRETT_004138
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Entry
BRETT_004138 CDS
T07183
Symbol
CHC1
Name
(RefSeq) Clathrin heavy chain
KO
K04646
clathrin heavy chain
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx04142
Lysosome
bbrx04144
Endocytosis
bbrx05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
BRETT_004138 (CHC1)
04142 Lysosome
BRETT_004138 (CHC1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
BRETT_004138 (CHC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbrx04131
]
BRETT_004138 (CHC1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bbrx04147
]
BRETT_004138 (CHC1)
Membrane trafficking [BR:
bbrx04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
BRETT_004138 (CHC1)
Exosome [BR:
bbrx04147
]
Exosomal proteins
Proteins found in most exosomes
BRETT_004138 (CHC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_H_link
Clathrin_propel
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_ELP1
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
64576061
NCBI-ProteinID:
XP_041135410
UniProt:
A0A871QZ07
LinkDB
All DBs
Position
5:258992..264004
Genome browser
AA seq
1670 aa
AA seq
DB search
MSESPPIDLIDVCQLQSLGVNPASFNFLSTTLQSDHYVCCRETANGKNTVAMVDLKNNNS
LTRKNMSADSVIMNPSQFIIALRAKGTALQVFDLSTKKRLKSNIMHEPIVFWQWLNDNEI
GLVSAQKIYTWNVMDGTSNGPVELTSRHVSLANCQLTQMVTNFESSWFALCGVAQENNAI
VGHIQLFSKARNISQPIQGHVCCFGKVRQQGASVDTQVFACASRTPTGGNLHLLEIEHQP
GAPAFQKKTVEVFFPAEIANDFPISIQISDFYGVVYILTKYGFIHVYDLESGKKIFLNRI
SSDPIFTAAKFDDNKGVITVNRAGAVLAVEIATDRVIPYILNNLADVDLALSLASRSGLP
GAEALFSQQFNQSLSSGDYQAAVKIAASSAQMRTPETINRLKALPTAPGQPAPILQYLVY
LLDRGSLNQYESLELVRPLVMQNRIETLEKYLKEDKLTCSEEIGDIIKPKNTPIALAVYY
KSNTPAKVVDCLAELGQTDKILPFCQKVDYHPNYTTLIQSILRVNPDKAAEIATQLLSAE
PDMDIEKTADIFFSQNYIQQGTAFLLDALKDDKPAQGDLQTRLLQVNLLNAPQVADAILG
NNIFSHFDRPTIAKLSEQAALYQRALDLYDDTKDIKRVVSQHASEIPPDWVVSYFGKLNV
DQSVSCLREMLSADKTKNMQVAIQVATKYSDLIGASKLIKIFEDFNCVDGLYYFLGSIVN
TSQDADVVLKYIQCAAKMGQVKEIERVVRGNNVYNGEKVKNFLKEAKLDDQLPLIIVCDR
FDFVHDLILYLYKNKFFKFIEVYVQQVNPAKTPQVVAALLDVDCDEQVIKSLLQSVVGKV
PIGELCNEVEKRNRLKILLPFLEASLQSGVTDNAIYDTLAKIYIDSNNNPEKFLKENDQY
NTLEVGRYCEKRDPYLAYIAYDKGQNDAELVKITNENAMYKYQARYVLKRSDPELWNTVL
SDENTNRQQLIDQVIGTAIPEIEDPQPVSIAVKSFMDNGLTGQLVNLLEKIILESSPFND
NPSLQALMILTAIKVDPSKVMGYIERIDAYDPEEVAPVCIENKLYEEAFAIYDKFEKYSD
AMKVLTEDVMSLDRAYDYAEKLDQKELWSQLGAAQLNGLRIPEAIDSYMKAEDPSNFEQV
IEISEHAGKEEELIPYLLMARKTLQEPVVDGALVNAYATLGKLSEMEKFLQLSNVADLES
IGDKLYEAENYDAAKIVYSSISNYSKLASTLVYLKDYQEAVDCARKASNVSVWKQVNQAC
LENGEFRLAQICGLNLVVHAEELDELVAQYEYNGYFSQLISLFENGLALERAHMGMFTEL
AILYTKYQPEKTMDHLKLFWSRINMPKVIRACQDAHLWTELVFLYKHYDEWDNASLTMMD
HSESAFDHSSFKEVVVKVSNLEIYYKAINFYTNMHPALLNDLLAVLIPRLDLPRVVRIFQ
KSDNLPLIKPFLISVSEKNNSVVNQAYHDLLIEEHDYKSLRSVIEAHDKFDQLGLAERLE
KHDLIFFREIAAVIYRKNKKWNKAISLLKTDKLWADAIETAALSKSSKIATDLFEYFVDT
GNREAMVALLYSCYSLIDYDKVLELSWLNNLSDFVKPYEISIARENQLKITELYKDFKAR
ESSKDGEDDSTAPQRLMITNGTGIPTGPNQIGYTPTGAGFGNGGFSNAGF
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaagccctccaattgatcttattgacgtatgccaattgcagtcgctgggtgtg
aaccctgcgtcttttaactttttgtcaacaactttacagtcagatcactatgtctgctgc
agggagacggcaaacgggaaaaataccgttgcaatggttgatttaaagaacaacaacagt
ctcacgaggaagaacatgagtgccgactcggttatcatgaacccatcacagttcattatt
gctttgcgtgccaaaggtactgctctacaggtgttcgatctttcgaccaagaaaagatta
aaatccaatatcatgcacgagccaatcgtattttggcagtggctcaacgacaacgagatc
ggactggtgagtgcccagaaaatctacacttggaacgtgatggatggtacgagtaacggc
ccagtagagttaacatcacgtcatgtttcgttggcaaactgccagttgacgcagatggtg
acgaactttgagtcctcatggttcgccctatgcggtgttgcccaggaaaataacgctatc
gttggccacattcagcttttttccaaggcaagaaacatctctcagccgatccagggacac
gtttgctgcttcggaaaagtccgccagcagggtgcctctgtggacacacaggtatttgcg
tgtgcctccaggaccccaacgggcggaaatctccatctgctagagattgagcatcaacct
ggtgcaccagccttccagaaaaagaccgttgaggtgtttttccccgctgagatcgccaac
gacttccctatttcgatccagatctctgacttctacggtgttgtgtacattctaaccaag
tacggcttcatccacgtctatgaccttgaaagcggaaagaagatcttcctcaacaggatt
tcctccgatccgatcttcactgctgcaaagttcgacgacaacaaaggtgtcatcacagtc
aacagagcaggtgccgtgttggccgttgagattgccacagatcgagttatcccatacatc
ctgaacaacttggcagacgttgatcttgccttgagcttggcatcaagaagtggtcttccc
ggtgcagaggcgctcttcagccagcagttcaaccagtcactttcctccggtgactaccag
gctgccgttaagattgctgcctcgtctgcccagatgagaactccggaaaccatcaacaga
ttaaaggctctacctaccgccccaggccagccagcaccaattcttcaatacttggtctac
ttgctagaccgcggctcgttgaaccagtacgagtctcttgagttggtcaggcccttggtt
atgcagaacagaatagagaccttggagaagtacttgaaggaagacaaacttacatgctcc
gaggagatcggtgacatcatcaagcctaagaacacgccgattgctttggccgtctactac
aagtctaacacaccggcaaaagttgttgattgcctcgccgagttgggccaaactgacaag
atcttgcctttctgccagaaggtcgattaccatccaaactatacgactttgatccagagc
atcttgcgtgtgaacccggacaaggctgccgagatcgccacgcagcttttgtctgccgag
cccgatatggacatcgagaaaacggccgacatcttcttctcgcagaactacattcagcag
ggaactgccttcttgctcgatgcattgaaggacgataagccggcccagggagatttgcag
accagacttctccaggtcaacttgctcaatgcaccccaggttgcagatgccattttggga
aacaacatcttctcccactttgaccgtccaaccattgccaagctttccgagcaggctgcc
ctataccaacgtgcattggacttatacgatgacactaaggacatcaaacgtgttgtttcg
cagcatgcttcagagattcctccagattgggtcgtcagctacttcggtaagcttaatgtt
gaccagagtgtttcgtgcttgcgtgaaatgctctctgccgacaagaccaaaaacatgcag
gtggccattcaggtcgccacgaagtactctgacttgattggggcatccaagttgatcaag
atattcgaggacttcaactgtgtcgacggcctgtactatttcttgggctcaatcgtgaac
accagccaggatgcagatgttgtcttgaagtacattcaatgtgctgccaagatgggccag
gtgaaggaaattgagcgtgttgtgagagggaacaacgtgtacaacggtgaaaaggtgaag
aactttttgaaggaggccaaattggatgaccagcttcctttgatcatagtttgcgacagg
ttcgacttcgtccacgacttgatcttgtatctttacaagaacaagttcttcaaattcatc
gaggtttacgtccagcaggtgaatccagcaaagactcctcaggtcgttgccgctttgcta
gacgttgactgtgatgagcaagtcatcaagtcgctgctacagtcggttgttggaaaggtt
ccgatcggcgaactatgcaatgaagttgagaagaggaacagactaaagattcttcttcca
tttttggaggcctcattacagagcggcgtcaccgacaatgccatttatgacactcttgcc
aagatatacatcgactcgaacaacaacccagagaaatttttgaaggagaacgaccagtac
aacacgttggaggttggtaggtactgcgagaaaagagatccatacttggcatacattgcc
tacgacaagggtcagaacgatgccgagttggttaagatcacaaacgagaatgccatgtac
aagtatcaggccagatatgttttaaagaggtcggatccagagctttggaataccgttttg
tcggatgagaacacaaacagacaacagcttattgatcaggtcataggcacggccattccg
gagatcgaggatcctcaacctgtgtcgatagccgtgaaatcgtttatggataatggcttg
actgggcagttggtgaatttgctcgagaagatcattctagagtcttcacctttcaacgac
aacccatcattacaggctcttatgattttgactgccattaaggtcgatccatccaaggtt
atgggatacattgagcggattgatgcctacgatcctgaagaagttgccccagtctgtatt
gagaataagctgtacgaggaggcatttgcaatttacgacaagtttgagaagtattctgat
gccatgaaggttcttactgaggacgtaatgtccttggaccgggcttatgactatgctgag
aagctcgatcagaaagaattgtggtcacagcttggtgctgcacaactcaacggattgaga
attccagaggccatcgattcatacatgaaggctgaggatccaagcaactttgagcaggtc
atcgagatttctgagcatgccggaaaggaggaagaactcattccatatcttttgatggca
agaaagactcttcaagagcctgtcgttgatggtgcacttgtgaatgcatatgccacactt
ggaaagctcagcgagatggagaagttcttgcagctatcgaacgttgcagacttggaatca
atcggtgataagctttacgaggccgaaaactacgatgctgccaaaattgtttattccagc
atttcaaactactccaaacttgcatccacgttggtttatctcaaggactaccaggaggcg
gttgactgtgcaagaaaggcctccaatgttagtgtctggaagcaggtgaaccaggcttgt
cttgaaaacggtgaattccgtttagcacaaatctgtggtctgaatttggttgtgcacgct
gaagagttggacgagttagttgcccaatacgagtataacggctacttcagtcagttgatc
tcgttgtttgagaatggtctggctcttgagagagcacacatgggaatgtttacggagctt
gctatactttacaccaagtatcaaccagagaagaccatggaccatttgaagctattctgg
tccagaatcaacatgccaaaggtcatccgtgcttgtcaagatgctcatctctggacagaa
cttgtattcttatacaagcactatgatgaatgggataatgcttcattgacaatgatggac
cattctgaatctgcctttgaccattcttcattcaaggaggttgttgttaaagtttcaaat
cttgaaatatactacaaagccatcaacttttacaccaacatgcacccagcccttttgaat
gacttgcttgcagttcttatcccaagattggaccttcctcgtgttgttcgtatattccag
aagtccgacaacttgccattaatcaagccattcctcatttccgtgtcagagaagaacaac
tcggttgtcaaccaggcataccacgacttgctcatcgaggaacatgattacaagtcgcta
cggtctgtcattgaggcacacgataaatttgatcagcttggtttagcagagcgcttggaa
aagcacgatcttattttcttcagggagattgccgccgttatctatagaaagaacaagaag
tggaacaaggccatctctttgcttaaaacagataagctatgggcagatgctattgaaact
gccgcactatcaaagagctcaaagattgcaaccgacttgtttgaatactttgtggatacc
ggaaatagagaggccatggttgcattactgtactcgtgctactcattgatcgactacgac
aaggttttggaactttcgtggttgaacaatttgtctgatttcgtcaaaccatacgagatt
tccatcgctagagagaaccaacttaagattacagagttgtacaaagacttcaaggcaaga
gagagttccaaagatggggaggatgattccacagcccctcaaagattgatgattacaaat
ggtacgggaatcccaactggtccaaaccagattggttatactcctactggagcaggattt
ggaaatggaggattttcaaatgctggcttttag
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