Brettanomyces bruxellensis: BRETT_004152
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Entry
BRETT_004152 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K26122
E3 ubiquitin-protein ligase substrate receptor MMS22
Organism
bbrx
Brettanomyces bruxellensis
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbrx04121
]
BRETT_004152
03400 DNA repair and recombination proteins [BR:
bbrx03400
]
BRETT_004152
Ubiquitin system [BR:
bbrx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul8 complex
Target recognizing subunit
BRETT_004152
DNA repair and recombination proteins [BR:
bbrx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
BRETT_004152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP6_C
Motif
Other DBs
NCBI-GeneID:
64576075
NCBI-ProteinID:
XP_041135424
UniProt:
A0A871R8J6
LinkDB
All DBs
Position
5:complement(join(291357..294631,294697..297289))
Genome browser
AA seq
1955 aa
AA seq
DB search
MSDTLSIPDSQSDDENSPLTRNLILHLETQEKRKRIWKRQEHILKELAPLTDDFLVLPTT
RSRRHAFAQRHIYTADLAEYLHLASRNQLNKLSKSGFTDDEILHMLERKYKKIRKLYKRI
GVKLFRFKKKSFSMYVKDFRNYQTSRGGRTYYELAEPTPKNKNDLKQLRVLYERDLSDVS
STDDDTTDDEQVQADQNTDLEVNMDEHSDDTDSEIVVDKNPKEGADNTDERHIIINAISP
PNLEIETGHEISKDTTEDKRLEPIDGVVDCLSPNVADGLSHNDGDGLSPNVDNDSLHLSS
SVEPSQYTVDEGDSQNGSRSIQIANYSNISQSNQADMNDDVEMLIDGDSVGASAENNADE
HQVNKSDLAIQENYNDGIASRMRRHKFSQDHVYVADTSVHLGLCTLYTLNELYDSGKSYG
DIMLFLEKKYKQKRDSLLDKGILLGPFSKRTYKAYLDEENRRLGGFDKHYAEKQAENEDT
MNGFLDLDDTETSDEEYLQPDSIRSINKKLMADSKEDTLGTGYNSESSDGSSVYEIRSDS
ELASSISMESAENSIEGENFVFRNRILNRRTALRGVLPASFYKVSNHKHSGRANNSYKSG
PQLDEESMFPRKGIARKISGPYKSNPVRNQIADDFLAPAGSEGPADDDPAEYHRIDLDLQ
KSPSPTPDDIFEIPVSESDNPNEPHPYMAFNGNETNDDDAVGIDDYDNFVRKMKDDMDMD
ASAEEDDHAGINYMLSRAPRSKRPRTYASRRSKRAKHYSALYSGGPTVRDHKGNQTHFSH
HLKLHKHPLEPRNLQGESISHFRPVKICRRIGRRTDHISGGHRPRNSFNPQHTRHYRNHN
PKLLTKVATTNNYDRGHTKDEDKQKRFYFGRKKVVGTPQIEESQTFPEENTDFSNEADKA
GIKRGRESNDIEIIAETKNHIPLSLAGTKIQISDIGPELFSSLHLSPKSVVYSGLIQESL
KLDGLYHKNGSISFEFGTVQFNLSTFDVTGELKSSLKILLDSMRSSLNFPKSTGPETLNQ
MRKCLIQIIQLLWNLNKNDPRGVHEVGELLLTFCRSCIVSTSNKKINLIALPYQIVYMQL
LQNFTLEKKSSDFKNYAEEFRHSQDQYITVFCKLPLRKIIRYFQTKSGVGSLIYESACLM
MLFAVNPWSRVAGLSTKFDFALDGVLGFLYFCHSRIPVTTDWTYFLLELDKLKDCKNSSR
WKIIFQLVQKVHYDLSWNLEEAVLLKMYRLLTYVKFENMGSNRSTILWYSALPVTTQFMD
RDGCLDMYLKLLVYFVNDPANSVQKSTLVEKLVPIASIKTSTVALLRNRANLMLVMSYLF
RADFIGHFRVILKALLEYRTSESYKSSLDLLLVVLRCYFHLFHRISFDIVQMVMPEVVAA
INNNELSVTLVSDSLRNIVDCFDNQLGECIDDGEKLTLCMELACIFLKLKKVDFHTRAAY
VPLLMLKILKRIMEATDAEILKSVQTKLKNEMIPLLKNIISADDIFNDTLKVKCLNLWVY
LSSRLNVTAGSLAYIEWQYFSNESARNKFELPFYAAMLKFYRPVDLRYLHENFFVVLMKN
LPLELNSYFVEFFTLLAAQDFMQKYVKFRSGLDPSKFTEADLKLYHQQLSVKILSCLVKG
IKESEMDKKRHKLYIVEFVKAMEKEYVRLKNGKLRMEGYTKYATRLARYLCTVLGNIVES
VPEFVLLKGQLCITTILSSLSDELESMSSSNEVYFLLLSKYFAALKDNTWEDFRKELVGY
CLDKGGFVDDDQRLSSIVPLSMIISAHISLVLRDRNYWFHFSNWVTVFTDVICGLIVYTS
DDLVYIIKSLTLMTRLAGTSRFPLIYYENQAVINVYKILERLNIYLLGSGDRIDFIHSLD
TLRGLDSTVSLNISRDLFLSFSSTNLNKQVQLIYKRNKELMDTDTFPPVSESMLNESNHK
LSEIRNKVMGQILSDQNDSNMHQCFNGFENISFFI
NT seq
5868 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatacattgtctataccggactcacaatcggatgacgaaaattcacctttaaca
cgtaatctaatattacatttggaaacccaggagaagcggaaaaggatatggaagcgacaa
gaacatatattgaaggagttggcaccattgaccgatgattttcttgttttacccactacg
agatcacgtcgtcatgcatttgcacaacgccatatttacactgcggacctcgcagaatat
cttcatcttgcatccagaaatcagttaaataagctttcaaaaagtgggtttactgatgat
gagatacttcatatgcttgagcggaagtacaaaaagatacgaaaattatacaaacgaatt
ggggtgaagttgtttaggtttaagaaaaaaagcttctccatgtacgttaaggacttcaga
aattatcaaacatcaaggggtggtcgtacgtattacgaactagcagaaccaactccaaag
aacaagaacgatttgaaacaacttcgagtattatacgagcgagatttgagcgatgtttcc
agtacggatgatgatactacagatgatgagcaggtacaagctgatcaaaacacagatctg
gaagtaaatatggatgaacattctgatgacacagacagtgagattgtcgttgataagaat
ccgaaagagggtgctgataatacagatgaacgccatattataataaatgcgatttcacca
ccaaacttggaaattgaaactggacatgagatttcaaaggatacaaccgaagataaacgt
ttggaaccaatagatggtgtagttgattgtttatcacctaatgttgccgatggtttatca
cataatgatggtgatggtttgtcacctaatgtcgataatgattctttacacctttcaagt
tctgtggagccatctcagtatactgttgacgaaggtgattctcaaaatgggtctaggtcc
attcagattgcaaattattctaacatctctcaaagtaaccaggctgacatgaatgatgat
gttgaaatgcttattgatggtgattcagtcggtgcatctgctgaaaataatgcagatgag
catcaagtgaacaaatccgaccttgcaattcaggaaaattataatgatggaattgcgtca
aggatgagacgtcataaattttcacaggatcatgtctatgtggctgatactagtgtacat
ttgggcctttgcacactgtacactttaaatgaattgtatgactctggaaagtcatatggc
gatataatgttgttcttggagaagaaatataagcagaagagggactctttactagacaaa
ggtatattattgggcccattttctaagcgaacatataaagcgtacttagatgaggaaaat
cgacgtttaggtggatttgataagcattatgccgaaaagcaggcagaaaatgaagacact
atgaatggatttctagatctggatgatacagaaacatcggatgaagaatatttacaaccc
gatagtataaggtcaatcaacaaaaagttgatggctgactcaaaggaggatacacttgga
acaggttataattcggaatcatctgacgggagtagtgtctatgagattcgtagtgatagt
gagttggcatcttctatatccatggaatctgccgaaaattcaatagagggagaaaatttt
gtcttcaggaataggattcttaatagaagaaccgctttaagaggcgttcttccggcctct
ttttacaaagtgagtaatcataagcattccggaagagctaacaatagctacaaaagcgga
cctcaattagatgaagaaagcatgtttcctcgaaaaggtattgcgaggaagatcagcgga
ccatacaaatccaatcccgtccgtaaccagattgctgacgacttccttgcaccagctgga
tccgaaggtcctgctgatgacgatccagcagagtatcatcgaatagatcttgatttacag
aaaagccccagtcccactcctgacgatatatttgaaatacctgtttctgagagtgataat
ccgaatgaaccacacccatacatggcttttaatggcaacgaaactaatgatgatgatgca
gtaggaattgatgattacgataactttgttcgcaaaatgaaggatgatatggatatggat
gcaagtgcagaagaagatgatcatgctggtattaactacatgcttagccgtgctcctcgt
tctaagcgtccaagaacttatgcctctagaagaagtaagcgtgccaagcattattcagca
ttatactctggtggcccgactgtcagagatcataaaggaaatcagacgcattttagtcat
cacttaaaattgcacaagcatcctttagagccacgaaatcttcaaggtgaaagtatttct
cattttagaccagttaaaatttgccgcaggatcggcaggagaacagaccacatatctggt
ggtcatagaccacggaattcattcaatccacaacatactcgtcattatagaaatcataac
cctaagttattgacaaaagttgcaactacgaataattatgacagaggtcacacaaaggat
gaagataagcaaaaaaggttttactttggtcgaaaaaaggtggttggaactccacaaatc
gaagagtcacaaacatttccagaagagaatacagacttttcaaatgaagctgataaagcc
ggaattaaaaggggtagggagtctaacgatattgaaatcatagctgaaacaaaaaatcat
attcctttatctttggcgggtacaaagattcagatttcagatattgggccagaattgttt
tcatcgcttcacttaagcccgaagtcggttgtctactcgggtcttattcaagagagtctc
aaattagatggtctttatcataaaaatggaagtatatcctttgaatttggaacagttcaa
tttaacttatccacatttgatgttaccggtgagctcaaatcatctcttaaaattttgctt
gattccatgagatcatcattgaactttcctaaaagcacaggcccagaaactttaaatcag
atgaggaaatgcttgattcaaattattcaactactgtggaacttgaataaaaatgatccc
cgaggtgttcatgaagttggtgaattattacttacattttgtcgttcctgcatagtttca
acgtcgaacaaaaagattaatttgattgcattaccataccagattgtatacatgcaattg
ttacaaaactttacgctggaaaagaagtcttctgattttaagaattatgctgaagaattt
cgtcattcacaggaccagtacataactgttttctgtaaattacctctcagaaagatcatc
cgatacttccaaacaaaatcaggcgtgggttctttaatatatgagtctgcttgtctaatg
atgctttttgcggttaacccatggagtcgtgttgcaggtttgtcaacaaaattcgacttt
gcgctcgatggtgttctcggattcttatatttctgtcactcgagaattccagtaacaaca
gattggacttattttctgcttgaattagacaaacttaaagactgcaagaattcgtctcga
tggaaaattatatttcagctggtacaaaaagttcattacgatctttcttggaaccttgaa
gaggctgtactccttaaaatgtatagattattgacttacgtgaagtttgagaatatgggg
tcaaacaggtcaactatactatggtattcagctttgccagttacaactcagtttatggac
agagatggttgtttggatatgtacctcaaactgttggtttattttgtaaatgaccctgct
aactctgtccagaaatctacgttggtcgaaaagcttgtgcccattgcttctataaagacc
agcactgttgctttgcttagaaatagagcaaacttaatgcttgtgatgtcgtatcttttc
agagcagatttcattggtcactttagggttatacttaaggcattgttggagtacagaact
tctgagagttataagtcttcacttgacctgttacttgttgttttgaggtgctattttcat
ctctttcatcgaatttcatttgatatcgtacaaatggttatgccggaggttgtcgcggca
ataaataacaatgagttaagtgttactctcgtttccgatagtttgcgaaatattgttgat
tgcttcgataatcaattgggtgaatgcatagatgatggtgagaaattgacactttgtatg
gaacttgcttgcattttcttgaaattgaaaaaggttgattttcacacaagagccgcatat
gttccccttttaatgcttaaaatattgaagaggattatggaggctacggatgccgagatt
ttgaagtcagttcagacaaaattgaaaaatgaaatgatcccattgcttaagaatattata
tcagccgatgatatctttaatgatactttgaaagtgaagtgtctcaacctgtgggtatat
ttgtcgtcgagacttaatgttactgctgggtctttagcctacattgagtggcaatatttt
tctaacgagtccgcccgtaacaagtttgagttaccgttctatgctgctatgttgaagttt
tataggccggtcgatctcaggtatttacatgagaacttttttgtcgtcttgatgaaaaat
ctaccgttagaattgaattcgtatttcgttgagttcttcacattgctggcagcgcaagat
ttcatgcaaaaatatgtgaaattcagaagcggattggatccatctaaattcactgaagca
gatctaaaactatatcatcaacagctttctgtgaagattctttcatgtttagtgaaagga
ataaaggagtctgaaatggataaaaaaaggcataagctatacattgtcgaatttgtcaag
gcaatggaaaaggagtatgtgcgtcttaaaaatggaaagttgcgcatggagggatataca
aaatacgcaactcggttggcaagatatttgtgtaccgttcttggcaatattgttgaaagt
gttccagaatttgtacttctaaaagggcagctttgcatcacaactatcttgtcttcccta
agtgatgaacttgagtcgatgtccagttcaaatgaagtgtattttttacttctcagcaag
tattttgcggcattgaaggataacacttgggaagatttcagaaaggaacttgtgggctat
tgtcttgacaaaggtggctttgtagatgatgaccagagactttcgtcaatagttccatta
tcaatgattatatcagcacatatatcattagttttgcgtgatagaaactattggtttcat
ttcagcaattgggttacagtatttactgatgttatttgcggtctaattgtgtatacttcg
gatgatcttgtctatatcattaagtctcttacgttaatgacgaggctcgccggtacatcg
aggtttccccttatttattacgaaaaccaagccgtcattaatgtttacaagattctcgaa
aggttgaatatttatcttcttggatcaggtgacagaattgattttattcactctctggat
acattgaggggattggatagcacggtctctcttaacattagcagagatcttttcttaagc
ttttcgagcaccaatttgaacaagcaagttcagttaatatataaacggaataaggagttg
atggatacagacacatttccacctgtcagtgaaagcatgctaaatgagagcaatcataaa
ttatctgagataagaaataaagttatgggtcagatcttatcggatcagaatgactcaaat
atgcatcaatgcttcaacggatttgagaatatttctttctttatataa
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