Brettanomyces bruxellensis: BRETT_004353
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Entry
BRETT_004353 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BRETT_004353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bbrx03009
]
BRETT_004353
Ribosome biogenesis [BR:
bbrx03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
BRETT_004353
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Utp21
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
Beta-prop_WDR3_2nd
ANAPC4_WD40
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
CFAP251_N
WD40_Gbeta
Beta-prop_VPS8
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_EML
PAC11
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
PEP5_VPS11_N
Cytochrom_D1
DSE1_N
Beta-prop_TEP1_C
Tricorn_2nd
Beta-prop_Aladin
Beta-prop_ACSF4
WDR90_beta-prop_4th
Beta-prop_HPS5
TRM82_WD
Beta-prop_RIG_1st
Beta-prop_Nup120_160
BCAS3_WD40
VirDNA-topo-I_N
Motif
Other DBs
NCBI-GeneID:
64576276
NCBI-ProteinID:
XP_041135625
LinkDB
All DBs
Position
5:729766..732588
Genome browser
AA seq
940 aa
AA seq
DB search
MTASISFSEKRQKIPSLKGKNEAVRYSRIFSPFRTIGLVSDGKPFAIGTLGQTFYIVTIV
GHSFQIFDAATLHLLFVSSTQTKSEINCVEAHFEYVYCAYGNSVAIFKRGRLQHEIHLPD
NKSVIIKILVFGDYLLAITSSSIFVYEKKSTHDKYATELYTEIPVNKSYGNIIDAVHLPT
YLNKVVIATSTMLLLINIRSTKTIYVTENGLFDGITCLEASPALDVLAIGNDNGKVTLFN
IRKARVLQKISTGSNSIITSISFRTDGPSHLVCSLRSGALFFYDMERRARVHVMQKAHKE
AYGGATRASFLNGQPIVVSTGSDNSLKEFVFDPVLSSTDSSVVSPPRYLRSRGGHSAPPC
SIIFADDSSHYIESASRDHTFWMFSLRKDAQSQELSQKRSKMRDGKRVAGVVSQYSGKFA
PITMIAQENAREGAWDNIVTAHQQETFARTWDSRRRKVGKYELPTIDHGNVSSVAMTQCG
NFALVGSSLGGIGVYNMQSGKIRKLYRLHKKPVTGIAVDGMNRKMVSCGLDGIVGFYDFS
ESKYLGKLTLEAPITQMVYQRSSDLIAAALDDMSIVIIDASTQRIVRHLYGHTNRITAMD
FTPDGRWLVSASLDATIRTWDLPTGGCIDGIKLSNVATCLKISPQGEYMATAHIGGVGIS
LWTNKSQFHPVSTKSIEDESEFANMMLPNVSGEGGASVLEGAFTQADQDTQSGVYISPEQ
LDQSLVTLSHCSRTKFSTLLHLDTIKERNKPTEPVKKPESAPFFMQISADSNGTQAETEK
HSEDAEKDASSRILDIKDTASAAFESRFTKLLRQAAESPTRDYSAFIEYLIDLSPASTDL
EIKSLSFKTPFDEATWFLEALIQGFNEKKSFELLVAIYSMFLRQHGDIIYEMRNNAEEDV
ITTRFLEKLDECDKVTSSETSGLDKLTKYCAGVVDFVMAA
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgactgcatctataagcttttctgagaaacgacaaaagatcccgtcgttgaaggggaaa
aacgaggctgtgaggtactcgaggatcttttcacctttccgaactataggtctggtttct
gatggtaaaccatttgcaattggaacactaggtcagactttttacatagtgacgatcgtt
ggccactctttccagatttttgatgctgccaccttgcatttgttatttgtgtcgtcaacg
caaaccaaatcggagatcaactgtgtggaagcacacttcgagtacgtgtattgtgcgtat
ggaaatagtgttgcgatatttaaacgaggcagactccagcacgagattcatcttccagat
aacaaatcagtcataatcaaaattcttgtctttggtgattacttgcttgcgatcacatca
tccagcattttcgtttatgagaaaaaaagcacacacgacaaatatgccaccgagctgtac
acggagattccagtcaacaaatcgtatggaaatatcattgatgcggtccatcttccgaca
tacttgaataaagttgttattgcaacttcgacgatgctattattgatcaacatcaggtcc
acgaagacgatatatgtgacggagaacggcttgtttgatggtatcacgtgccttgaagcc
tcaccagcgttggacgttcttgctattggtaatgataatggcaaggtcacgctgtttaat
ataaggaaagcccgtgtcttgcaaaagatttcaaccggttccaacagcatcatcacatcc
atttcgttcagaaccgacggaccgtcacatttagtctgttcgttgaggtcgggagcattg
ttcttctacgatatggaaagaagagcacgtgttcatgtcatgcaaaaggcacacaaggag
gcctatggtggagcaacaagggcctcgtttttgaacggtcagccaatagttgtctctacc
ggttccgataacagcttgaaagagtttgtgtttgatcctgtgctatcatcaaccgattcg
tctgttgtgtctccaccacggtatctcagatctcgtggaggccattctgccccaccttgt
tctatcatctttgcagacgacagttcgcattacatcgaatctgcatccagagaccacact
ttttggatgttctctctccgtaaagatgcccagtcgcaggaactttcccagaagcggtcc
aagatgagggacggcaagcgtgttgctggtgtggtgtcgcagtacagcggaaaatttgcg
ccgataacgatgattgcacaggaaaatgcccgggagggtgcctgggacaatatagtgaca
gcccaccagcaggaaacgtttgccagaacgtgggactcgagaagaaggaaggtgggaaag
tatgagcttcccacgattgaccacggcaatgtgtcctcggttgcaatgacgcaatgtgga
aattttgcacttgttggctcgagtcttggaggaataggcgtgtacaatatgcagagtggg
aaaatcaggaagctttaccggttgcataagaagccggttactggaatagccgttgatgga
atgaatagaaagatggtgtcgtgtggcttggatggaattgttggtttctacgacttttcc
gaatccaaatacttgggaaagctcacccttgaggcacctatcacacagatggtctaccag
agatcgtccgatctcattgccgccgcattggatgatatgtcgattgtcataatagatgca
tccacgcaaagaatagtcaggcatctatacggacatactaaccgaatcacagccatggat
ttcacaccagatggtcgttggttggtctctgcatccttagatgcaacgattagaacctgg
gatctaccaaccggaggatgtattgatggtataaagttgtcgaatgtggccacgtgtctc
aaaatatccccacagggagaatatatggcaactgcgcacatcgggggagttggaatttca
ctatggaccaacaaatcgcaattccatcctgtttccaccaaaagcatcgaagacgaatcc
gagtttgcgaacatgatgcttccaaacgtgagtggtgaaggaggagcatctgttcttgaa
ggggcctttacacaagcagatcaagatactcagtctggtgtttacatctctcccgagcag
ttggatcagagtcttgttacattgtcacattgctctaggacaaaatttagcactttgcta
catttagataccattaaggaaagaaacaagcctacagagcccgtcaagaagccggaatca
gctcctttctttatgcaaatcagtgcagattcaaacggaacacaggccgaaacagagaag
cattctgaagatgccgagaaggatgcttcatctagaattttggatattaaagacaccgca
tcggctgccttcgaatcccgatttaccaaattgttaaggcaggcagccgaatcaccaaca
agggactattctgcatttattgaatatctaatagacctttcaccagcttccaccgatttg
gaaataaagtctctttctttcaagactccatttgatgaggctacttggttcctcgaggcc
ctaattcagggatttaacgaaaagaagagctttgaattgctcgtagcaatttattcaatg
tttctaaggcagcatggagatatcatatatgaaatgagaaataacgccgaagaagatgtt
atcactacaaggttccttgagaaattagatgagtgcgataaagtcacctcaagcgaaact
tccggcttggacaagcttacaaagtattgtgcaggtgttgttgactttgttatggctgca
tga
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