Brettanomyces bruxellensis: BRETT_004390
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Entry
BRETT_004390 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
bbrx
Brettanomyces bruxellensis
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbrx04131
]
BRETT_004390
Membrane trafficking [BR:
bbrx04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
BRETT_004390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_VAB
VPS13_M
VPS13_C
Motif
Other DBs
NCBI-GeneID:
64576313
NCBI-ProteinID:
XP_041135662
UniProt:
A0A871R0U4
LinkDB
All DBs
Position
5:complement(join(815941..815950,816165..825652))
Genome browser
AA seq
3165 aa
AA seq
DB search
MLESLVASILNRTLGQYVENFDPAQLNIGIWSGDVKLRDLKLKQESLDRLGLPIALKFGH
LGQLTLQIPWSNLKSKPVKIIVEDMFLLASAMLPTEINVQEEEERKLRVKKSKLEALELS
ENTLPASESEEDREKNENFMESLTTKIVDNLQITIRNIHLRYEDRDTFTKVPYAVGLTLQ
ELSAVSTDENWIPGFVLGASDLSRKLTTLKSLEVYWETNAQTLYDADRQKMVDSFLSVID
KNSSLEGEGVQHLMKPVSGYGHLTVNKAGSTESAPHYNVDLFFDEFGVTLDEEQYRDMCW
TISEVTWYQKTYKFRRLRPHVPVEEDPKQWLRYAFRCVYDEIHERNYKWTWEYFEKRRDQ
RKKYVNAWLKHLEGDPDATVQAEIYNLESQVAYNDLKFYREIAKMEYVRKHHAHPASNAV
QKQASANTGTASSWISWWKGGSTAADAGQSKKEDLAEGEDTDLTLSSQQRKELYDAIGYD
EQKKLTDSLDMPRERVRTCIGWNLKKGSFVIKKAQTHKPVAEVIFEGMHADVFQRKDSYY
LGFKLREFRVENGASGTLYKHIVSVKPFDTGSAESSSSSEMDAEGGPDEKESFFQISYES
NPLDESADSELLAKMNSMTIFHDPRFIEEVARFFRPPQTHADTIGAIMNAAESTIQGFTD
QTRIGLQYAFDEHTTINCKMDLQAPLIIMPLDCTSWSSPVCVLDAGHINVMSDLVDKQKI
KEIKGADKSTFGESDWEKLNAFLFDRFELQLEDAQMLIGPNVKAAIEQLHSSGPKPSLIL
DHLTINILLELSIVPTYTHLPLMKISGNIPQIKASLNDYQHRIFSQALMTMMPDLSATLA
VPAESSNDLEMLVSNEESSPGYDVGLGSATTDSSEGSNDTSGSEQRRKIMQHKLDVSINI
GVIVISLSRCSDPKTFEAEKLADVVGENFRLRYFSTEETMNANVELADFSIYDFMEPTGN
EEFKKLVSADVSSAESKPRNLFTVAYTRKQRNVNFNSKIIQAFDQDVDLNISDFKVVLTR
KSVLTLVSFLRNTFVDPNAPLLPADQLRHNDEANAQTAPEQMKLKLEMNSITLILNDDGY
KIGTMKLKEADIDMILFPDKMRLNASIGGLTLRDDISKNIPSLSQLIRIKGREFIKLHYE
TFDPETNRLPYSSELSLETGSIVITFVQSSFARIYSFISQFSRMKDIYDNAREAALSQAT
SIEGTDKMKFDVLLRAPILIFPKVRNPLTGEIDTINTNLGEIDASNSFTESGGSIFNITT
AKLKNTRICSTFSLPDGGRQNLEIIDKFDVQLNANYYDGCVLSRPATIIKAVISGSDMKL
TDWQAHYILEIIQSIPQAFTDYSIGNETIRDLEDDALQANMIISREESPSKAVINETLIQ
KSKSSDQSTTANSGHGDKTTVSVHVEIPAISLTIYNNTRKSATLDNKGLSRFMVNDLCMK
ADVRESGSYDANVQLKSFVVRDVRNDTKNKFPEIIPASASDGYQLVASVKGVTAEGKSFT
KVDLQINNPTLLLAMDYMISLKTFVDAVLDTTATTKELDNRLQTIEENSTYRHKSMTGDE
ESDVIEDSEASEQKELSYAIRIPNISIILLANSEKPDSEAVVFKISQIVLSATDITRVQL
KGIGMFLCNMDAYEVNRIQIIDDFSSKFEIDSRGSSPTSYLTQMAFDVDPLLIRVSLSDI
KLATDIFNRASAIYSEATKAASTPAENRRRRRSSIASEISQTIAKHAPSVLSSLTKISNK
AGAKKKPNVIVKAEKFLATLGGMRIVLIGDVHELPVLDVVVKPLNAQVKNWSTDLEADVT
FQPQIQIYNYSTSSWEPLLDQWSFSIHVTKDSKAKGELAVSISSDDIAEVTLTKRSIASL
SYFGSLLKEESEIRPRGEGAPYLLFNQTGYDLNVWIDGQSTDSAHRKQLTLLKNGDHIPW
AFEDWREIRKNLNMQTERDTLAVEFIDSQFNPVKAISLTTEGEDIFMLEPKYRNAYHHRL
ACEVVLAKDKVKHVILKSTITIHNHTPQGLFIGVGKYNSKPVVDREVHIPSGGKIALPID
LVYEGKLVVRPETKGQQFGWSMARCRKTNRNSLFDWKTISRSDMILECPSTESGSIKSYY
FNARAKFNSSEVLTKVYPHMVINITPPLVLQNLLPFDVNWELFQKGTDKWECDLKQGTSS
SIHVIDMNNSAVMKLSIPGTSFGKSRPAIINTSNKDVKNDDTVLLINDEHQKLYLRLLYT
SSPEAGRKVTLYTPYLIVNRTGKTVIISNGANFMVSRAKKIKPGYDDAMPDMFSFGKDSR
GLFTTNFETNHVALKIEDSLLSRSFNIDKVGQNFQIEAPMDGKPFEYDIGVHITEGKGAF
NLTKVVTLTPRYIVRNDLAETIYVTSIGSSRHLRLDPGKIIPIYGVSRMNPKQICISTKN
DGKMSAPFNINDVGEIFVRAQKRDSLSHLLVRVVITTEGASIFISMMDTNGSWPYSIRNF
SDFEFIIYQSDPYMKLDGTRRSNVRFKPVLYKIPPKSAMPYAWDFPAADVKELVLRSGNK
ERFVQLAEIGTLYPMRLGSSSNSPTNGRNVVDLNVQAEGPVQVLMINNYDPKTSMYRMKS
NSSSHTTNSRNSGDFETGTKDENYNLSVSVDFKGLGVSLINSECEEISYITLRGAIMNYA
ESEIHQNIALKLKWLQVDNQTYPATFPVLIYPTVVPKSKKEMNEHPVFSAGISKMKDDSH
GVTYIKFATALFQEMSFELDEPTISSLMEFFKTPEASENDDTIDVLWDKHTEIPEPPTLR
TGDDYYFELLHLQPLQFNVSFERTDELDDDAPISGNPIALAASAISMAVGNIRDAPIKMS
SLILENVRTPLPYLQQNIQEHYKQAFLYQWYKVLGSADVIGNPVGLFNNISSGVMDIFYE
PYQGYIMTDRPQELGIGLARGGISFLRKSLFGVSDSVSRFTSSVAKGLTVASMDRDFQKK
RRQNRQKSRPNHPLGGFASGTNSLFDGITSGLSGLAIAPIKGANEEGASGFIKGLGRGII
GLPTKAATGVLDFANDISESIKSSTTAFDKDSSRRMRLPRNIRYNGCVTSYSEREAQGQY
WLKTCDGGKYSRERYLAHVMLPGFEMVCIVSMSRILVVTVETLKAEWNMPYEKIGNITLE
NTGILIKQNRAGSPERFISIPGKADQIFLYRNIVTAVNEYNKNRM
NT seq
9498 nt
NT seq
+upstream
nt +downstream
nt
atgttagagtctctagttgcgtcgatattgaatcggacgctggggcagtatgtggagaat
tttgatccggcccaattgaatataggaatatggagtggagatgttaaactacgggacttg
aagctcaagcaggaatcattggaccggttggggcttccgattgcactcaagtttgggcat
ctaggccagttgacgttacagataccatggtccaacctaaaatcgaaacctgtgaagatt
atcgtcgaggatatgtttcttttggccagtgcaatgcttcccacagagataaatgtgcaa
gaggaggaggagaggaagttgcgtgtgaaaaagagcaagctagaggcattggagttgtcg
gagaacacacttccggcctcggaaagtgaggaggacagggaaaagaacgagaatttcatg
gaaagcttgaccacaaagattgtggacaacttgcaaatcacaatacggaacatccatttg
cgatacgaggaccgggacaccttcacaaaggtgccgtatgcagttggattgaccctccaa
gagctctcggctgtgtccacggatgaaaactggattccagggtttgtattgggggccagc
gatctgtcgagaaaactcacaactcttaaatcgctcgaggtgtactgggagacaaatgca
cagacactctatgatgccgaccggcagaagatggtggattcgttcctctccgttatcgac
aaaaattcgtcgttggaaggtgaaggcgtccagcatctcatgaaaccagtctctggatat
ggccatctcacggtaaacaaagcgggaagcactgaatcagcgcctcactataacgttgat
ctatttttcgatgagtttggtgtcaccttggacgaagaacagtatcgagacatgtgctgg
acgatctcggaggtcacgtggtaccagaaaacgtacaaattccggcggttgaggccacat
gtgcccgttgaagaggacccgaagcagtggctcaggtatgcattcaggtgtgtgtatgac
gagatacacgagcgaaactacaagtggacctgggagtactttgagaagagaagagaccag
cggaagaagtacgttaatgcatggcttaagcatcttgaaggggacccggatgccaccgtt
caggccgaaatatacaacctggagagccaggtggcatacaatgacttgaagttttaccgg
gagatagccaaaatggagtatgtgaggaagcatcatgcacacccggcctcgaatgcagtg
cagaagcaggcttcggcaaatacaggcaccgcttcctcgtggatttcgtggtggaagggt
ggttctaccgccgctgatgccggacagagcaagaaggaggatctggcagagggtgaagat
acagatcttacactctcttcacagcagaggaaggagttgtacgatgcgataggatacgat
gagcagaagaagctgacggactcgttggacatgccgagggaaagagtgaggacttgcatc
gggtggaatttgaagaaggggtcgtttgtgatcaagaaggctcagacgcacaagccggtt
gcagaagtcatctttgaaggaatgcatgcggacgtgtttcaaagaaaggactcgtactat
cttgggttcaagttgagagagttccgggtcgaaaacggagccagtggcacgctctacaag
catatagtgagcgtgaaaccgtttgacacgggcagtgcggaaagctcatcgagttctgag
atggatgctgagggcggcccggacgagaaagagtcttttttccagatttcctacgagagc
aacccgttggacgagtctgcagactccgagttgttggccaagatgaacagcatgacgata
ttccacgatccacgctttatcgaagaggttgcgaggttcttccgcccaccacagactcat
gcagacaccattggtgccatcatgaatgctgccgagagcaccatccagggattcacagat
cagacaagaatcgggctccagtacgcgttcgatgagcacacaaccattaactgcaagatg
gacttgcaggcaccgttgataatcatgcctctcgactgcacaagctggtcatctccggtc
tgtgttcttgatgcgggccacataaacgtgatgagcgatttggtggacaagcagaagatc
aaggagatcaagggagccgacaagagcacctttggcgagtcggactgggagaagttgaac
gcgttcttattcgaccggttcgagcttcaacttgaggatgcacagatgctgatcgggcca
aacgtcaaggctgcaatcgagcagcttcactcctcagggccgaaaccgtctctcatcctc
gaccatttgacaattaacatattgctcgagttgtcgatcgtccccacctacactcatcta
ccgttgatgaagatcagcgggaacattccgcagataaaagccagcttgaacgactatcag
cacagaattttctcccaggcactaatgaccatgatgccggacttgtcggctactttggct
gtgcctgccgagtcttctaacgatctcgagatgctggtttcaaacgaggagtcttctcca
ggctatgatgttggtctaggttctgccaccactgattcatctgagggttcaaatgacact
tcaggcagcgagcagaggagaaaaatcatgcaacacaagctggatgtgagcatcaacatc
ggtgtgatcgtgatcagcctaagcagatgctctgatccgaagactttcgaggccgagaag
ttggcagatgtcgttggggagaatttcaggcttcggtacttcagcacagaggaaaccatg
aatgcaaatgttgagcttgccgacttttcgatctatgactttatggaaccaactggtaac
gaagagttcaagaagttggtttcagcagatgtgtcttctgcagaatccaagccccggaat
ctcttcactgtagcctacacgaggaaacagaggaacgtgaacttcaacagcaagatcatc
caggcttttgaccaggacgtcgacttgaacatatcggactttaaagtggtcctaacgagg
aaatcggtccttaccctcgtcagcttcctcagaaacacgtttgtggacccaaatgctcct
ttgcttccggcagaccagcttagacacaatgatgaagcaaacgcacagactgcacctgag
cagatgaaactaaagttggagatgaacagtatcaccttgatattgaacgacgatggttac
aagattggaaccatgaagctaaaggaggccgacatcgacatgatcctgttcccggacaaa
atgagactcaatgccagcataggaggtctcacattgagagatgacatcagcaagaacatc
ccgtctctatcgcagctaataagaataaagggaagagagttcatcaagctacattacgaa
acgtttgatcccgagacaaacaggctgccttacagctccgaactttcgcttgagaccggt
tcaattgtcatcacattcgtgcaaagctcgtttgcgagaatctactcgttcatcagccag
ttcagccgcatgaaggacatttacgataatgctagagaagccgctttgagccaggctact
agcatagaagggacggataagatgaagtttgatgttttgctccgtgcaccaattctcatt
tttcccaaggtcaggaacccgttaacgggtgagatcgacacaataaacacgaatctagga
gagatagatgcctcgaactctttcactgaaagtggcggaagtatcttcaacattaccacg
gcaaagcttaagaataccaggatctgttccacgttttcgcttcctgacggagggcggcaa
aacttggagattatcgataagtttgacgttcagttgaacgcaaactattacgatggatgc
gttttgagtcggccggccacgatcatcaaggctgtgatctctggaagtgacatgaagctt
actgattggcaggctcactatatcctggagattatccagagtattccgcaggcgtttacc
gattattccatcggcaatgaaaccatccgggacctcgaggatgatgctctgcaagcaaat
atgataatcagcagggaggaatcaccctccaaggctgtgattaatgaaacattgatccag
aaaagcaagagttcggaccagagcacgactgctaactccgggcacggagataaaacaacc
gtgagcgtgcatgtggagattccagcaatctcactaacaatatacaacaataccagaaaa
tcagccacactcgacaacaagggtctttcgagatttatggtgaacgatctctgtatgaag
gcggatgttcgagagagcggaagttatgatgcaaacgtacagctgaagtcctttgttgtg
agagatgtgcgaaatgacaccaagaacaaattcccggaaatcatccctgcttcggcgagt
gatggatatcaacttgttgcttccgtgaagggagtcactgccgagggaaagagcttcacg
aaagtggatctccagatcaacaacccaacattgctcttggcaatggattatatgatctcg
ttgaagacgtttgtggatgctgttttggacactactgccacgaccaaggagcttgataac
agattgcaaacaatcgaggaaaacagcacttacaggcacaagtccatgaccggagacgaa
gaatcggatgtaattgaggactcagaggcttccgagcagaaagaactatcgtatgccatc
agaattccaaacatatcgatcatcttgctcgccaactctgaaaagccagattcagaggcg
gtggtcttcaagatctcacagattgtacttagtgccaccgatatcacgagagtccagctt
aagggaatagggatgttcctttgtaatatggacgcttacgaagtcaacaggatacagatc
atcgatgacttttcttccaagttcgaaatcgatagcaggggctcgtcccctacatcgtat
cttacacagatggcttttgatgtggatccgcttttgattcgtgtttctctcagcgatatc
aagctagccaccgatatattcaacagagcatcggcaatatactctgaggccacaaaagct
gccagtactcctgctgaaaatcgcaggcggaggaggtcttcaattgcctcagagataagc
cagaccattgctaaacacgcaccatctgttttatcgagtctcaccaagatatccaataag
gcaggcgccaaaaagaagcctaatgtcatagttaaggccgagaagttcttggccacactt
ggtgggatgagaattgttctcattggtgatgtccatgagctccctgttcttgatgtggtt
gtaaaaccactgaatgctcaggtgaagaactggtctaccgatctggaggctgacgtcacc
ttccagccccagattcaaatatacaactactccacttcgtcctgggagccgttgctagac
cagtggtcttttagtattcatgttactaaggacagcaaggctaaaggagagcttgctgtt
agcatcagctcggatgatattgccgaggtcactttgacaaaaagatcgattgcatcgctt
tcatactttggctccttgctcaaggaggagtccgagatacggccaaggggtgaaggtgca
ccttatctgctcttcaaccagactggatacgatcttaacgtgtggatcgatggccagagt
acagattcggctcatagaaagcagctcacactgcttaaaaacggagatcacattccctgg
gccttcgaggattggcgggaaatccgtaagaatctaaatatgcagacggaaagagacacc
ttggctgtggagttcattgattcgcagtttaatccggttaaagccatctcgctcacaaca
gagggcgaagatatattcatgcttgaaccaaagtaccgcaacgcatatcatcacagactt
gcttgcgaagttgtgcttgcgaaggacaaagtgaagcacgtgatcttaaaatcgaccatc
accattcacaaccacaccccacaggggctatttattggtgttgggaagtacaacagcaag
cctgtggttgaccgggaggttcatattccaagcggtggtaaaatagctcttccaattgat
ctggtgtacgagggaaagctcgtagttcggccagaaaccaaggggcagcagtttggttgg
tcgatggctcgttgcaggaagacaaacaggaactcactgtttgactggaagacgatatca
agaagtgacatgatcttggaatgcccaagcacagaatcgggaagcattaagagctactac
ttcaacgccagggccaagttcaactcctcagaggtcttgacgaaggtttatccacacatg
gtcatcaacattactccgcccctggtgttgcagaacttgcttccatttgatgtgaactgg
gaattgttccaaaagggaaccgataagtgggagtgcgacttgaagcagggcaccagctcc
tcgattcacgtgattgacatgaataattctgcggtgatgaagttgtcgattccaggaaca
tcgtttggaaagagccggccggcgataataaatacatccaacaaggatgtgaagaatgac
gacacggtacttttaatcaacgacgagcaccagaagttgtatctaaggcttctttacacc
agcagcccggaggcaggccgaaaagtcactctttacactccgtatcttatcgtaaacagg
acgggtaagactgtcatcatcagcaatggagccaacttcatggtttcaagagcaaagaaa
atcaaacccggatacgatgatgctatgcccgacatgttttcgttcggaaaggactcaaga
gggttgtttacgacaaacttcgaaacaaatcacgttgctctgaagatcgaagactctctt
ctcagccgcagcttcaacattgataaagtgggccagaacttccagatagaggctcctatg
gatggcaagccattcgaatacgatattggtgttcatatcactgagggaaaaggagcgttc
aacttgaccaaggttgtcaccttaactccaagatacatcgttagaaatgacttggccgag
accatatatgttacttcaatcggatcttcgcgtcatctacgccttgatcccgggaaaatc
atcccgatttatggcgtgtcaaggatgaatccaaagcaaatatgcattagtacgaagaac
gatggtaagatgtcagctcccttcaatatcaatgatgttggtgagatatttgttcgggca
caaaagcgggactctttgtcccatttgcttgttagggtggttatcacgacggagggtgca
tcgatattcatcagtatgatggacaccaatggcagctggccttactccataagaaatttc
agcgactttgaattcataatctaccaatccgacccgtacatgaagctggatggaactagg
cgctctaatgttcgtttcaagccagttttatacaaaattcctccaaaaagtgcaatgcct
tatgcatgggactttccggcggctgatgtcaaggagttggtgttgagaagtggaaataaa
gaaaggttcgtgcagcttgctgaaattggcacactttatccaatgagacttggctccagc
tccaattcaccaaccaacggcagaaacgttgttgatttgaatgttcaggccgaaggtcca
gtccaggtgttgatgataaacaactatgatcctaaaacgagcatgtatcggatgaagtcg
aattcttcttcacataccacaaacagccggaattccggcgacttcgagaccggaaccaag
gacgaaaactacaatttgagcgtttcggtggactttaaaggattgggtgtttcattgatc
aattcagagtgtgaggaaatcagttatataactttaagaggagcaataatgaactatgca
gagtctgaaatccatcagaacattgctctgaagcttaagtggcttcaagtggacaaccag
acgtatccggcaacattcccggttctcatatatcctactgttgttccaaagtcgaaaaaa
gagatgaacgagcacccagtgttttcagcaggcatttctaagatgaaagacgattcacat
ggggtcacatacatcaagtttgcaacagcactatttcaggaaatgtcctttgagctagac
gagccaacaatttcctccttaatggagttcttcaagacaccggaagcatctgaaaatgat
gataccatcgatgtattatgggacaagcatacagagattccagagccgcctactctaaga
acaggagacgattactactttgagcttcttcatttgcaacccttgcagttcaatgtttcg
tttgaacggactgatgagctggatgacgatgctcctatatccggaaatccaatagctttg
gccgcgagtgcgattagtatggcagtgggaaatattagagatgctcctatcaagatgtca
tctttaattttggagaatgtgagaactcctctaccgtacctccagcaaaatatccaggag
cattacaagcaagcctttttgtatcagtggtacaaagtgcttggatctgcagatgtcatc
ggcaatccggttgggttgttcaacaacatcagttccggagtgatggatatcttctatgaa
ccatatcagggatacattatgactgacaggcctcaggagttgggaataggattggcaaga
ggtggtatcagctttttacggaagtctttgttcggcgttagtgacagtgtgtcacgcttt
acaagttccgttgcaaagggactcactgttgcatccatggacagagatttccaaaagaaa
aggaggcagaacaggcagaaaagccggccaaaccatccacttggtggttttgcaagtgga
acaaactcgttgtttgacggtatcaccagtggattgtctggtttggctattgctccaatc
aaaggtgcaaacgaagaaggtgcctctggattcatcaaaggactgggtaggggaattatc
ggtcttcctacaaaggccgctacaggagtgctagactttgccaatgatatcagtgagagc
atcaagagctcgaccactgcctttgataaagacagctcgaggagaatgcgtcttccaaga
aatatccgatataacggatgtgtcacctcttattccgaaagagaggcccaaggtcagtac
tggttgaaaacatgcgatggtgggaaatattctcgtgagagatacttggctcatgtgatg
cttccaggattcgagatggtgtgcattgtcagtatgtccaggattttggttgttactgtg
gagactttgaaagccgaatggaacatgccttatgagaagataggtaatatcacattggag
aacaccggaattcttattaagcagaatcgggccggctctccggaaaggtttatttcaatt
ccaggaaaagctgaccagatatttttgtataggaacatcgttactgctgtcaacgagtac
aacaagaatcgtatgtaa
DBGET
integrated database retrieval system
