Brettanomyces bruxellensis: BRETT_004519
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Entry
BRETT_004519 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BRETT_004519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bbrx03009
]
BRETT_004519
Ribosome biogenesis [BR:
bbrx03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
BRETT_004519
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Gbeta
EIF3I
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ASA1
Beta-prop_WDR75_1st
ANAPC4_WD40
Utp12
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
DSE1_N
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_WDR41
NBCH_WD40
Beta-prop_VPS8
Beta-prop_NOL10_N
CFAP251_N
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_RIG_2nd
Beta-prop_ACSF4
WD40_like
PEP5_VPS11_N
PAC11
WD_LRWD1
Ge1_WD40
Tricorn_2nd
PALB2_WD40
UCP007778
WDR54
PylS_N
Beta-prop_DCAF12
Pex14_N
Motif
Other DBs
NCBI-GeneID:
64576442
NCBI-ProteinID:
XP_041135791
UniProt:
A0A871R6D8
LinkDB
All DBs
Position
5:1143362..1146268
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AA seq
968 aa
AA seq
DB search
MVKSYTRYELNRTIGVIASHSNSIFIEPDSKEAKKSAGRVITACLEEILVWDIKTGEILQ
RLHDGMAPGSLNSTSQNPPAQTVSLAYEPITNVLASGYSDGSIKIWDLTSGVVLINFQGH
RSAVSMLKFDRSGTRLVSGSRDTTAILWDLVGETGLFKLEGHRDQITGIEFLSATDKTGT
DEMDDWLLTTSKDGMIKLWDLKAKQCVETHVAHSGECWALGLNDTRELCLTCGMDNQVKL
WKVDLTQEKTKIVEQGSFEKQSKRRGIEIGFHTTSQGEFFYISNADKMCELFRFRTEKEM
KKATAKRTKRLQAKGLSEAEIEKNIKESTVNMLVAPFTVIYAERSKIRSATWGKLSDRKL
DIVLSLTNNTLSYYNVTIPEVVRKHKSSEQVAEEKYILDRLGHRHDIRAVDISDDDALII
TGSNNQLKVWNAKTGNCIRTFEKTGYVLSAKVLPGGSLVVIGTKDGYLRLLDLAKSTVLD
SIDDAHGGKAIWSIDLSPDGKTIVTGSADKTIKFWEIKVIKDLVPGTTDKYVELLHLDHT
RTLELTDDVLSVRVSPDGKYLAAALMDNTVKVFFYDTLKFYLSLYGHKLPVLSIDISFDS
KTIITSSADKNIRIWGLDFGDCHRSIFGHQDAIMCVRFFPDSKNFVSCSKDGMVKTWDGD
KFQNVQKLAVHQSEVWSLAMSHSGEFFVTVSHDSSIRIWQETDDQVFLEEEREKEMDENY
EDELISSLEGGNGDDMALKKKSDSNEDDEDEDDEQSKITRVSRQTMEKLKAGEKLMDALD
LSSKQMDDMINYEEEMQKFKHGQLGILQPTKPEVNALLQALNKTPEDYVLDALVKIKAAQ
LEDALLVLPFSYSLKLLKFIRIWTNADQQKKNNDYIARICRTLFFVTESNHMELISQKDP
EIKMEIMDLKDQLREILEGTKDKVGLNLAGLKFIQEQWNQNHSHVFDESKPQEDEDSHKR
KRVYTTIA
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagtcttatacgagatacgagcttaaccgcacgataggtgtgattgcatcgcat
tctaattcgatctttatcgaaccagattcaaaggaagcaaaaaagagtgctggcagagtg
atcacagcatgtcttgaggaaattctcgtatgggatattaaaacaggagaaatcctacaa
agactacatgatggtatggcgccaggatcattaaattcaacaagtcaaaatccaccggcc
cagactgtaagcttggcatacgagccaataacaaacgttttagcatctggatactcggat
ggttctataaagatttgggatttgacttcaggtgttgtcctgataaatttccaaggtcac
agatccgctgttagtatgttaaagtttgatagatccggcaccagattggtttccggttct
agagacaccacggctattctttgggatcttgtgggagagaccggcctatttaagttggaa
gggcacagagatcaaataacgggaattgaatttttgagtgccacggataaaacaggaaca
gatgagatggatgactggctattgacgacatccaaggatggaatgataaagctttgggat
ttaaaagctaaacagtgtgtggaaacacacgttgcacatagtggagaatgctgggctttg
ggtctcaacgataccagagaactatgcttaacatgtggcatggataatcaggtcaaactt
tggaaggttgatttaacgcaggagaagacaaaaattgtcgaacaaggcagctttgagaaa
caaagtaagcgtcgtggcattgagattggatttcacactacaagccaaggcgagttcttt
tacataagcaatgccgacaagatgtgtgaattatttagattcagaactgagaaggaaatg
aagaaggccacagccaaaagaacaaaaagacttcaggccaaaggattgtcagaagccgag
atcgagaaaaacatcaaggagtctactgttaacatgcttgttgccccattcacggttata
tatgcagagagatccaagataagatcagcgacatggggaaaattatcagacagaaagctt
gatatagtactttcgttgacaaacaacactttgtcgtactacaatgtgacaattcccgag
gttgttcgtaagcacaaatcttcggagcaggttgcagaagagaagtatatattggacagg
ttgggacatagacacgatattagggctgtcgatatatctgacgatgatgcgttaattatt
acaggatctaataaccagctcaaagtctggaatgccaaaacgggcaactgtattcgtact
tttgagaagactgggtatgtgctatcggccaaagtgttacctggtggatccttggttgtt
attggtacaaaggatggatacttgcgcttgctggatttagccaaatccacagttttagat
tcaattgacgatgcacatggcgggaaggctatctggtctattgatctctcacctgatggg
aaaactatagtaacgggatcagcagacaagactattaagttttgggagatcaaggtcatt
aaagatcttgttccaggtaccactgacaaatacgtcgaattactacatttagatcacacc
agaactttagaacttacagatgacgttctgtcggtgcgtgtttcaccagatggcaaatat
ttggctgccgcattgatggataacacagtcaaggttttcttttacgatacgttgaagttt
tatctcagtttatatggacacaagttgcccgttctatcgattgatatctcatttgattcc
aagaccatcatcacatcctctgccgacaagaatatcagaatttggggattggactttggt
gattgccaccgttctatatttgggcatcaggatgcaattatgtgtgtgagattcttccca
gattctaaaaactttgtaagctgctcgaaggatggaatggttaaaacgtgggatggcgat
aagtttcagaatgttcaaaagcttgccgtgcatcagtcggaggtgtggagcttggcaatg
agccacagtggagaattctttgttaccgtttcgcatgattccagtataagaatatggcaa
gaaacagatgaccaagtgtttttggaggaggagagagaaaaagagatggacgaaaactac
gaggatgagcttataagttcattggaaggtggaaatggtgatgatatggcattaaagaaa
aagtccgactcgaatgaagacgacgaggatgaagatgatgagcaaagcaagataaccaga
gtgagcagacagacaatggaaaagcttaaggcaggagaaaagttgatggatgcattggat
ctttcatcaaaacagatggatgatatgatcaactacgaagaagagatgcaaaagtttaag
catgggcagcttggaattttgcagccaacaaagccagaagtgaatgcgctactacaagca
ctcaataagactccagaggactatgttttagatgcattagtgaaaattaaggctgcccag
ttagaagatgctttgctagttcttccgttttcttattctcttaaactcttgaagtttatt
aggatttggacaaatgcagaccaacagaaaaagaataacgactatattgcacgcatttgc
cgaaccctcttctttgtcacggagtctaaccatatggaactcataagccagaaggatcca
gagattaagatggagatcatggatttgaaagatcaacttcgggaaatattggaaggaacg
aaagacaaagtgggattaaacttggccggattgaagttcatacaggaacaatggaaccag
aatcatagccatgtgtttgatgagtcaaagccacaagaagatgaagatagtcataagagg
aagagagtgtatactaccatagcttag
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integrated database retrieval system