Brettanomyces bruxellensis: BRETT_004529
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Entry
BRETT_004529 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
BRETT_004529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbrx03021
]
BRETT_004529
03019 Messenger RNA biogenesis [BR:
bbrx03019
]
BRETT_004529
Transcription machinery [BR:
bbrx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
BRETT_004529
Messenger RNA biogenesis [BR:
bbrx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
BRETT_004529
U7-dependent histone pre-mRNA processing factors
BRETT_004529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B
Lactamase_B_6
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_3
Beta_lactamase3
Tox-SHH
Motif
Other DBs
NCBI-GeneID:
64576452
NCBI-ProteinID:
XP_041135801
LinkDB
All DBs
Position
5:complement(1168759..1171008)
Genome browser
AA seq
749 aa
AA seq
DB search
MPESTEGKTNEHVNFYCLGGGNEVGRSCHIVEYKGKVVMLDAGVHPAYSGIESLPFYDDF
DLSRVDVLLISHFHLDHAASLPYVMQHTNFKGRVFMTYPTKAIYKWLLNDFVRVTTITDD
SNGMDENSNAFLYTDEDLNSSLDRIETLDYHSTIEVDGIRFTAFPAGHVLGAAMFLVEMG
GLKFLFTGDYSREEDRHLSSAEVPDVTPDLLIVESTFGTATHVPRLERENKLTTVIHSTL
QQGGRCLLPVFALGRAQEILLILDEYWQRHKDLQNVPIYYASSLAKKCMAVYERYINMMN
DSIRKKFTETNENPFHFKYIKNVAHADRIDDLNPCVMIASPGMLQNGVSRQLLEKWCPDP
RNTVIMTGYSVDGTMAKKLLTEPDQIPALNNPDVSIPRRMNVEEVSFAAHVDYEQNSEFI
DLVHAKKIVLVHGESNPMGRLKSALLSRYQKFKDTEDEVKVYNPRDGSKLDLEFKGIKIA
KVMGQLATSLPEDHDTVSGILVQKNFDLNLLKVDDLREFTGLTATVVRERQVLRCNVKRS
LLYWQFTQMFGYVKILIDDPDEYSFEVMDVVRITLEESEALATIEWHSGIVDDTVADSAI
AIIISCDSIPASVKISSHQHSHAHIKEVHSDAVKQEKHDVLIKEEDQTAEVNKFNSSVKK
ESTGLDSVLSDDYSPDIRLKHISMLLHAQFGDSFVTLPNNEGGTIIVGKHKATIDYKNFN
VDCKSNVLRGRIEGILRRSLDLVAPLSHE
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaatcgacagaaggaaagacaaatgagcatgtgaacttttactgtcttggtgga
ggtaatgaagtgggccgttcttgtcacattgtcgaatataaggggaaagtggtgatgcta
gatgcaggtgtccatcctgcttattctggaattgaatctcttcctttctatgacgatttt
gatcttagtagagttgatgttttactaatcagtcattttcatttagatcacgcagcttcc
ttgccttatgtcatgcagcacaccaatttcaaaggacgtgtttttatgacatatcctacc
aaagccatctacaagtggcttttaaatgactttgtccgtgtcactactattaccgatgac
agcaatggaatggatgagaattcgaatgcgtttctttatacggatgaagatttgaattct
tcgttggatcgaattgaaacgctagattatcattcaaccatcgaggttgatggaatccgt
tttaccgctttcccagcaggtcatgttcttggagcagctatgtttcttgttgaaatgggt
ggtcttaaatttttgtttacaggtgattattcaagagaagaagataggcatttaagttct
gctgaagttccagatgttacacctgatcttcttattgtggaatctacatttggtactgca
actcatgttccacgcttagagcgagaaaataagcttacgacagttatacattcaacatta
cagcaaggtggtcgttgtcttctcccggtgtttgctttgggaagagcccaagaaatttta
ttaatattggatgaatactggcagaggcacaaggatttgcagaatgttccaatttattac
gcctcaagtcttgctaaaaaatgtatggctgtttacgaaagatatatcaacatgatgaat
gacagcatcagaaagaaattcacagaaactaacgagaatccatttcatttcaaatacata
aaaaatgttgcacatgcagatcgaatcgatgacttgaatccttgtgtgatgatagcatcc
ccgggtatgcttcaaaatggtgtgtctagacaacttctcgaaaaatggtgtccagaccca
agaaacaccgttattatgaccggttattctgttgatggtacgatggctaagaaattgtta
actgaacctgaccaaattccagctttaaataatcctgacgtaagtatccctagaaggatg
aatgttgaagaggtttcgtttgctgctcacgtcgactatgagcagaattcggaattcata
gatcttgtgcatgccaagaagattgttttggtccacggtgaatcaaatcctatgggaaga
ttaaaatcagccttgttgtctaggtatcaaaagtttaaggacacggaggacgaagtcaag
gtttataatcctagggacggctcaaaacttgatttggaattcaaagggataaagattgca
aaggtcatgggacagctcgctaccagtcttccggaagatcatgatactgttagtggtatt
cttgttcaaaagaattttgatcttaacttattaaaggtggatgacttgcgtgagtttact
ggtttgactgctactgttgttagagaacgtcaagtattgcggtgtaacgtgaaaaggagt
ttgctttattggcagtttacacaaatgtttggttatgttaagattttgattgatgatccg
gatgaatactcatttgaagttatggatgtggtcagaattacattagaggagtctgaagct
cttgcaaccattgagtggcactctggaattgttgatgatacggtagcggattcagctata
gcaattataattagttgcgattctattcctgcatctgtcaaaatatcttcacatcaacat
agtcacgcacatataaaggaagttcattcggatgctgttaagcaggagaagcatgatgtg
ctaattaaggaagaagatcaaactgcggaggtcaataagttcaattctagtgtcaaaaaa
gaaagcaccggtttggattcagttctttcagacgattacagtcctgatataagacttaag
catataagtatgcttttgcatgcccaatttggagattcgtttgtgaccttacctaataat
gaaggaggtacgatcattgtagggaagcataaagctacgatcgattacaagaacttcaat
gttgattgtaagtctaatgtcttgcgtggacgaatagaaggaatactgcgaagatcattg
gatttggttgcaccactttcgcacgagtaa
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