Brettanomyces bruxellensis: BRETT_004686
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Entry
BRETT_004686 CDS
T07183
Symbol
SSL2
Name
(RefSeq) DNA repair helicase RAD25
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03022
Basal transcription factors
bbrx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BRETT_004686 (SSL2)
09124 Replication and repair
03420 Nucleotide excision repair
BRETT_004686 (SSL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbrx03021
]
BRETT_004686 (SSL2)
03400 DNA repair and recombination proteins [BR:
bbrx03400
]
BRETT_004686 (SSL2)
Enzymes [BR:
bbrx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BRETT_004686 (SSL2)
Transcription machinery [BR:
bbrx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BRETT_004686 (SSL2)
DNA repair and recombination proteins [BR:
bbrx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BRETT_004686 (SSL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
Motif
Other DBs
NCBI-GeneID:
64576609
NCBI-ProteinID:
XP_041136531
UniProt:
A0A871R8F0
LinkDB
All DBs
Position
7:join(411493..411792,411825..414086)
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AA seq
853 aa
AA seq
DB search
MESEPIDVSEQQPEASSGGKKESPKEKEEDDKYFSSGGESTDDTAASDYEVLDRLHASSR
TSGRRSTKQEAREKADEAEKRALAMDRPSDFVPDSVSRIFPDNASRPLWINPLDGRIYLE
SFSPLFEQAQDFLITIAEPVSRPSFIHEYRITTHSLYAAVSVGLETDDIISVLNRLSKVP
VAPSVVEFIKQATHSYGKVKLVLKHNRFFVESSQADILRMLLHDEVIGKLRFRPGKNGNN
NENTKNSSSNNNNNSTKDSNDNLAIAEAAVPSYAFGKNTVDKNNNKKEESAKDNEEEEDV
EDIYESVIGDEGDEAEDDIDKVHSFEIATESVEIVKKRCQEIDYPMLEEYDFRNDVRNAN
LEIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIRKSAIVLC
TSSVSVMQWRQQFLQWCTIQPNQIAVFTSENKEMFSGDSGLVISTYSMVANTRNRSHDSQ
KVMDFITSREWGFIILDEVHVVPAAMFRRVVTTIAAHAKLGLTATLVREDEKISDLNFLI
GPKLYEANWMELSQKGHIANVQCAEVWCPMPAEFYQEYLRENARKRMLLYIMNPTKFQAC
QFLIHYHENRGDKIIVFSDNVYALEQYALKLGKPFIYGSTPQQERMNILQNFQYNEQVNT
IFLSKVGDTSIDLPEATCLIQISSHYGSRRQEAQRLGRILRAKRRNDEGFNAFFYSLVSK
DTQEMYYSTKRQAFLVDQGYAFKIITHLNGMENLPNLAYSTPKERRELLQEVLLKNEEAA
GVELGEDSENLIGHGVSKRIKTSSSRAVKNQSSLSGLAGGEDMAYVEYSRNQNKELASHH
PFFQKNYYRKKMR
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggaatcggaaccaatagatgtcagtgagcagcagccagaggcttcaagtggtggaaaa
aaggagtctccgaaggaaaaagaggaggatgacaaatatttctcttctggtggtgaatcc
actgatgacacagcagcatctgattatgaggttttagacagattgcatgcttcttcaaga
acatctggaagaagatcaacaaagcaggaggcacgggaaaaggccgatgaggccgaaaaa
agagctctggctatggataggccttcagactttgttccggactctgtttcgaggattttt
ccagataatgcctccagaccattgtggatcaacccactcgatggccgcatttacttggag
agcttttcccctctttttgagcaggcacaagacttccttatcacaattgcagaacctgtc
agcaggccaagtttcatacacgaatacaggatcacaacacattcgttatatgcggcggtg
tccgtcggattagagaccgatgatattatttccgttttgaaccgtctttcgaaagttccg
gtggcccctagtgttgtcgaatttataaaacaagcaacgcactcttacggaaaggtgaag
ttggtgttgaaacacaacaggttttttgtggagtcatcgcaggcggatattctccggatg
ttgttgcatgatgaggtgattgggaagcttcggtttaggcctggaaagaacggaaacaat
aatgaaaacacaaaaaattcatcaagcaacaacaacaacaacagcactaaggacagcaac
gataatttggccattgccgaggccgcggtgccaagctatgcatttgggaaaaataccgtg
gataaaaacaacaacaagaaggaggaaagcgcaaaggataacgaagaggaggaagatgtt
gaagatatatatgaaagtgtcattggagatgagggagacgaggcagaagatgatatagac
aaagtgcattcgttcgagatcgcaacggaatcggtggaaattgtcaaaaaaagatgccag
gagatcgactatccaatgttggaggagtatgacttcaggaacgatgtgagaaacgccaac
ttggagatcgacttgaagccatcgacacagatcagaccttaccaggagaagtctcttagt
aagatgtttggtaacggacgtgccagatccggtatcattgtcttgccttgtggtgctggt
aaaactttggttggaattactgcggcctgcacaatcaggaagtctgcaattgttttgtgc
acttcctccgtgtctgtgatgcagtggcggcagcaattcttgcagtggtgcacaatccag
cccaatcagattgcagttttcacttctgagaataaggaaatgtttagtggcgattctgga
ttggtcatttcaacgtattctatggttgctaataccagaaacaggtctcacgactcacag
aaggttatggacttcatcacttccagagagtggggtttcattatattggatgaggtgcac
gttgtgcctgctgcaatgtttagaagagttgttaccaccattgcagcacatgcaaagctc
ggattaacggctactttggtccgtgaggacgagaaaatctcggatttgaacttccttatc
ggaccaaagctatatgaggccaactggatggagttgtcacaaaagggccacattgcaaat
gttcagtgtgcagaggtgtggtgtccaatgcctgctgagttttaccaggagtatctccgg
gaaaatgcgagaaagcggatgctattatacattatgaatccgacaaagttccaggcatgc
cagttcttgattcactaccatgaaaatagaggagacaagattattgtcttctcagataac
gtctatgctttggagcaatacgcattgaagcttggaaaaccgttcatttacggctcaact
ccgcaacaggagagaatgaacattcttcaaaacttccagtacaatgagcaggtgaacacg
atattcttgtcaaaggtcggcgacacatcgatcgacttgccggaggccacctgcttaatt
cagatatcgtctcattacggatccagaagacaggaggcacaaagattgggacgtattttg
cgtgccaaaagaagaaacgacgagggattcaacgctttcttttatagtttagtgtcaaaa
gatactcaggagatgtactattccacaaagagacaggcatttttggtcgatcagggttac
gctttcaagattattacccacttgaatggaatggagaatcttccgaacttggcatactcg
actccaaaggagagaagggagttacttcaggaagttttgttgaagaacgaggaggcagca
ggcgtggaattgggagaggattcggagaatttgattggccacggtgtctcaaagagaatt
aaaacatcatcttccagagcagttaaaaaccagagttcgctttctggtctggctggaggt
gaggacatggcatatgtggaatattccagaaaccaaaacaaggaattggcatcccaccat
ccgttcttccagaagaattactaccggaagaagatgagatga
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