Brettanomyces bruxellensis: BRETT_004742
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Entry
BRETT_004742 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRETT_004742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbrx03019
]
BRETT_004742
Messenger RNA biogenesis [BR:
bbrx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BRETT_004742
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
BRETT_004742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
E1_dh
Motif
Other DBs
NCBI-GeneID:
64576665
NCBI-ProteinID:
XP_041136586
UniProt:
A0A871R1B7
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Position
7:complement(575814..577898)
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AA seq
694 aa
AA seq
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MDRVFKKIKEGMEIFDTLYERHQTTSSSSQRDKLESELKKEIKKLQRFREQVKNWQTASE
VKEKDKLLEYRKLVERAMEQYKEVERGSKSKAYSNEALADAGEEKEDNEATRFVQKALDE
LQRQQEMLEAKLEKLDSGRRGRRSNPEVESRKQEIETTLGHHHWHTQKLELILRLLENKV
LNPDDVMAISDDLQYYLEDNQDPDFVNDDTMYDELDLDADVAIAHEVHSTFGEGVSAKKE
DDDKEEDKKSNEKNGQHEQKKESSVSSGISRSSSSNSTNNGGGSHVTFGVRSSSRSKSGS
PAPARVSRTNSGRNTPLHNYRLRTSSSVSSSSGVPTMANLRPAPVPKPAADLKWSAAVAM
SSGVGGKSEGGDASAMKAASATATANGNGNANATATSATPSTSKFSPPFAASSGMNLNAL
NAASVLEALKRQRPKDLAAKAPSSTSGASTASSSRNGGSAETATAATSHTATPGNTSGPD
EAFGTEKDTVCRPAIKINGGGGVPSSVSTSVHTQGAADRCRIGPTPRELGVQQDESFRFL
PAGLQNMLLSSAVACDRQKSGKRPACVDLRTMLSTPRSFSPLPGFVYPPGIEAQRVSTVW
DQVRVSKNIDADAQNVDTATLFFAYYYGLSQREREVAYQVLVARQWRCSKDRTVWYQRHS
PVKARGEGFEIADYNVFSAADWSLSEKPNYKVSY
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggaccgagtgttcaagaagattaaggaaggaatggaaatattcgacacactgtacgaa
cgacatcagacaacgtcgagctcttctcaacgagacaaattggagtctgaattgaagaag
gagatcaagaagttgcagcgattccgcgagcaggtgaagaattggcagacggcgagtgaa
gtgaaagagaaagataagcttctggagtatcggaagcttgtagaaagagcgatggagcag
tataaggaggtggaaagaggatcaaaatcaaaagcatactcgaacgaggcattggcagat
gctggggaggagaaggaagacaatgaggcgacgagatttgtccaaaaagcgttggatgaa
cttcaacggcagcaggagatgctggaggccaagttggaaaagctggattcaggacgaagg
ggacgaagaagcaatccagaggttgaatcgaggaagcaggagatagagacgactctcggg
catcaccactggcacacgcaaaagttggagttgatactgcggcttcttgagaataaggtt
ctcaacccggatgacgtcatggcgataagtgacgatctgcagtactatttggaggataac
caggacccggattttgtgaacgatgacacaatgtacgatgagctagacttggatgctgat
gtggcgattgcacacgaggtccacagcacgtttggtgaaggagtaagcgcgaaaaaggag
gatgatgataaggaagaggataagaagagcaacgaaaaaaacgggcagcacgagcaaaag
aaagagtcgagtgtcagcagcgggatcagcagaagcagcagcagtaacagcacgaacaac
ggagggggcagtcacgtgacattcggggtgaggagtagcagtaggagcaaatccggttcg
ccggccccggcaagggtgtcgcggacgaactctggccgtaatacaccacttcacaattac
aggcttcgcacgagttcgtctgtatcatcatcatccggggtgccgacgatggccaacttg
cgtcctgctccggttcctaaaccggccgctgatttaaagtggtctgcagctgttgcgatg
agcagtggagtggggggtaagtctgagggtggagatgcaagtgcaatgaaagccgcatct
gcaactgcaactgcaaatggaaatggaaatgcaaatgcaactgcaacttctgcaacccct
tcaacgtcaaaattctccccaccatttgctgcaagcagcgggatgaacttgaacgctctg
aacgccgcaagcgtactcgaggccttgaaaagacagcggccgaaggatttggctgcaaaa
gcaccaagcagcacttccggtgccagcacagcaagcagcagccgtaatggtggcagtgcc
gagactgcaaccgccgccacttctcacacagccactcctggcaacaccagtggaccggat
gaggcatttggcacggaaaaagacactgtttgcagacctgccatcaagattaacggcggt
ggtggtgtgcccagtagcgtaagcacatccgtacacactcagggggcagccgacagatgc
cgaatagggccgacaccgcgtgagttgggcgttcagcaggatgagagtttccgatttctg
cccgcaggcctccagaacatgctcttatcgtcggctgtggcatgtgaccgccaaaaaagc
ggaaaaaggcccgcttgtgtggatttaagaacgatgctctcgacaccaagaagcttttca
cctctccccggattcgtgtacccaccaggcatcgaggctcagcgtgtgagcacagtgtgg
gaccaggtgagagtgtcgaaaaacatcgatgcagatgcacagaatgtggacacagcaacg
cttttttttgcgtactactacggactatcccaaagggaaagagaggtggcctaccaggtg
ctggtggctaggcaatggcggtgcagtaaggaccgcaccgtttggtatcagagacactcg
ccagtgaaagcacgtggggaaggctttgaaatcgcagactacaatgttttctccgccgca
gactggagtctttctgagaagccgaactacaaggtgagctactga
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