Brettanomyces bruxellensis: BRETT_004853
Help
Entry
BRETT_004853 CDS
T07183
Symbol
DHH1
Name
(RefSeq) DExD/H-box ATP-dependent RNA helicase dhh1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRETT_004853 (DHH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbrx03019
]
BRETT_004853 (DHH1)
03036 Chromosome and associated proteins [BR:
bbrx03036
]
BRETT_004853 (DHH1)
Enzymes [BR:
bbrx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BRETT_004853 (DHH1)
Messenger RNA biogenesis [BR:
bbrx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
BRETT_004853 (DHH1)
mRNA degradation factors
5'-3' decay
Decapping complex
BRETT_004853 (DHH1)
Chromosome and associated proteins [BR:
bbrx03036
]
Eukaryotic type
Gene silencing
piRNA pathway
BRETT_004853 (DHH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Arcadin_1
Phage_integrase
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
64576776
NCBI-ProteinID:
XP_041136694
UniProt:
A0A3F2Y9R7
LinkDB
All DBs
Position
7:complement(851669..853051)
Genome browser
AA seq
460 aa
AA seq
DB search
MSTEEWKNKLRLPPKDTRRQTNDVLGTKGNTFESFHLKRELLMGIFEAGFEKPSPIQEEA
IPVALMGRDILARAKNGTGKTAAFVIPTLEKIKPRLNKIQALILVPTRELALQTSQVVKT
LSKHMEINTMVTTGGTSLRDDILRLHDPVHIMVGTPGRVLDLASRRLAVFDECKVFVMDE
ADKMLSREFKIIIEQILKFFPQSEPGKGNAYQSLLFSATFPITVKAFMDDHLYKPYEINL
MDELTLKGITQFYAFVEERQKLHCLNTLFSKLQINQAIIFCNSANRVELLAKKITELDFS
CYYSHARMPQAERNKVFHEFRQGKVRNLVCTDLLTRGIDIQAVNVVINFDFPKTAETYLH
RIGRSGRFGHYGIAINLINWNDRFNLYKIEQELGTEIKPIPAQIDKSLYVIDQPSSVPRP
FKIDNLPKANERAPRRFYNGQGEQEGPPVQQFAPQPQQQY
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgaagaatggaaaaacaagctgcgtctccctccgaaggacacgcggcgtcag
actaatgatgttctgggaacgaagggaaacacctttgaaagtttccatctgaaaagggag
cttctgatgggtatatttgaagcaggctttgagaaaccttcacctattcaggaggaggca
attccagtggctcttatgggtagagatattcttgcacgtgccaaaaatggtaccggtaaa
actgcagcttttgttattccaacattagagaagatcaaacctcgtttgaataaaattcaa
gctcttattcttgttcctaccagagagttggccttacagacatcacaagtggtgaaaact
ctttccaaacatatggagatcaacactatggttaccactggtggtacatctcttcgagat
gatattttacgtttgcacgatcctgttcacataatggtgggtacacctggaagagtgcta
gatttagcttcgagaagattggctgtttttgatgagtgtaaggtctttgtcatggacgaa
gccgacaaaatgctctcacgcgagtttaaaatcattattgagcagattcttaagttcttc
ccacaatcagaacctggcaaaggtaatgcctaccagtcacttttattctctgctactttc
ccgatcacagttaaggcattcatggatgatcacttgtacaagccatatgaaattaacttg
atggatgaattgactttaaaaggtattacacaattttacgcatttgttgaagaacgacag
aaacttcactgtttgaacactcttttctccaagcttcagattaatcaggccattatattc
tgtaactcggcaaacagagttgagctattggcaaagaagatcaccgagctagatttctcg
tgttattactcacatgcaagaatgcctcaggcagagagaaataaggtttttcatgaattc
cgccaaggtaaagtcagaaacttggtctgcacagacttattaaccagaggaatcgatatt
caggccgttaacgtcgttataaactttgattttccaaagactgcagaaacttatcttcac
agaatcggtcgttccggaagatttggccattatggtattgcaattaaccttattaattgg
aatgatcgttttaacctttacaagatcgagcaagaacttggtaccgagataaagccaatt
ccagcacagattgacaaatcactttatgttattgatcaaccatcatcagttccaagacca
tttaagattgacaatctccctaaggccaatgaaagagctcctcgaagattttataatggt
caaggcgaacaggagggtcctccagttcaacagtttgccccacaacctcaacagcagtac
tga
DBGET
integrated database retrieval system
