KEGG   Brettanomyces bruxellensis: BRETT_005000
Entry
BRETT_005000      CDS       T07183                                 
Name
(RefSeq) uncharacterized protein
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
bbrx  Brettanomyces bruxellensis
Pathway
bbrx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bbrx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BRETT_005000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbrx03019]
    BRETT_005000
Messenger RNA biogenesis [BR:bbrx03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     BRETT_005000
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC TPR_Epg5
Other DBs
NCBI-GeneID: 64576923
NCBI-ProteinID: XP_041136838
UniProt: A0A871R855
LinkDB
Position
7:1206749..1209226
AA seq 825 aa
MSGENKDDPLHGLAPKLVGLVRLCSALNSKDIDFYRSIDSGIKQESDDVRTKLLDMLNRL
VKSSISISTDLDPEQFIIKDGKENEKQNMKLIGDLLDTFFENVEIGMDAYKKSRIHEYDN
GAKSGTAGTNTEEEGPDGVKYTYLDDADNSTSKKLPIQMQHSKIEKPQTKFVPKVDNFEK
HPFKPKIDSKPNAVIPFEKSMELVPASEAIPQHYINPYEYEIMNAKYPDWIFSPIEHPYT
SVPWKSSPQPGWVDNVEQLKALLSELEKCKVIGVDLEHHDYRTYHGLTSLMQISTDTGKD
YIVDPLSAQLRPHLSLLNIVFTNPDIIKVFHGAFMDMMWLQRDLGLYVVSLFDTYWAAKE
LALGKYSLAFLLEKYIHFRTSKKWQLADWRIRPLGPEMRNYAKADTHFLIELFGKIQAEL
IKKPGAMKRVLYHSRKVSNRRFEYATYKPRNAAAFGVVSTGGSVPLTPEFQDALFSFDTS
RELPWLSLMRSNGIPDTKGPVVEALYKWRDNKARKEDESIRYIMSDFVLTSLANSFSPGA
IDQITEAAVLNVINRSARFGSSYYVRKCIKDLTVLIRDVMKQLSRIDLKAWQLAAGTITP
PVLSNTKIDAKNVYSSVRDVERLDDEFAGLSSQFEKLNFPGKTDEQTARCSLEKADPQLF
AGKESVGIRYSKGGNAATPVSKKEAKSRLDKIVDRFAKNTERVTLADLQIEEEAKHENAN
EIQNEEAEHDVDEQRPKREDKNEIITLRKHQNRNNRRRGKVQRNDGESIDLSKRLLEPID
DRKRRRKHKKRSYDPYADSSKQNPNIPLARKRKRRDLGKQATFKK
NT seq 2478 nt   +upstreamnt  +downstreamnt
atgtctggagagaataaagatgatcctttacatggattggcaccaaagctggtaggcctc
gttcggctttgttctgcattgaattctaaggacatagacttttatcggagtatagactcc
ggaataaagcaggaaagtgatgacgttcggacgaaattattggatatgcttaatcgatta
gttaaatcttctatttccatatcaacggatttggatcccgaacaattcattatcaaggat
ggcaaagaaaacgagaagcagaacatgaaattgattggagatcttcttgacacgtttttt
gaaaatgttgaaattggcatggatgcatataaaaagtccagaattcacgaatatgataat
ggagctaaatcaggcacggcaggcacaaatacggaagaagagggtccagatggagtcaag
tacacatacttagacgatgcagataactctacgagtaaaaagcttccgatccagatgcaa
cattcgaaaatcgaaaagcctcaaacgaaatttgtgccgaaagtggataactttgaaaag
catcctttcaagcccaagattgattcgaagccaaatgcggttattccatttgagaagagc
atggagcttgttccagcctcagaggcaattccacagcattatattaatccatacgagtac
gagattatgaatgctaaatacccagattggatattttcacccatagagcatccttacaca
tctgttccctggaagagcagcccacaacctgggtgggttgataatgtggagcaacttaaa
gcactattgtccgagttagagaagtgtaaagtgataggtgttgatttggaacatcatgat
taccgaacatatcatggtcttacatctttaatgcagatttcaacggacaccggcaaggat
tacattgttgacccgctttctgcacagctaaggcctcatttaagcctactaaatattgtc
ttcacaaatccagatatcatcaaagtgttccatggagcatttatggatatgatgtggctt
cagagggatttgggcctatacgtggtttcgctatttgatacctactgggcggcaaaagag
ttggctctgggcaaatattcgttggcatttcttttggagaagtacattcattttcgtaca
tcgaagaaatggcaacttgcagactggagaattcggcctttgggacccgaaatgaggaat
tatgctaaggccgatacacatttccttatagagctgtttggaaagattcaagccgagctc
ataaagaaaccaggtgccatgaaacgagttttataccattcacgaaaagtttcaaaccgg
agattcgagtatgcaacgtacaaacctcgaaatgccgcagcgtttggtgttgtttcaaca
ggtggctctgttccacttacaccagaattccaggatgctttatttagctttgatacaagc
agagagctcccttggctatcgctgatgcgttcaaacggtattccagatactaaagggcca
gtggtcgaggcattgtacaaatggagagataataaagcacggaaagaagatgaatcgatt
agatacatcatgtcagactttgttttgacatcattggccaattcattttctcctggggcc
attgatcaaattacggaggcagcagtgctgaatgtgattaatagatccgccagatttggc
tcctcatactatgtgaggaaatgcatcaaagatcttactgtgttgattagagatgtgatg
aagcaactgtctagaattgacctgaaagcatggcagcttgctgctggtacaattacacct
ccggtcctgtcaaacacaaaaattgatgccaagaatgtgtattcatctgtgagagatgtc
gagagactagatgacgaatttgcaggcctttcctcgcaatttgaaaagctgaatttcccg
ggaaagacagatgaacagacagcaagatgctctcttgaaaaagcagacccacaattattt
gcaggtaaggaatctgttggaattcgatactctaaaggtggaaatgcagccacgccagtc
tcaaagaaagaggccaaaagcaggttggacaagattgtggacagattcgcaaagaataca
gagagagttactcttgcagacctacaaatagaggaagaagccaagcatgaaaatgcaaat
gagatacagaatgaagaagctgaacatgatgtagatgagcaaaggccaaagagggaggac
aaaaatgaaattataacactaagaaagcatcagaacagaaataacaggaggagaggaaaa
gtacaaaggaatgatggagagagtattgatttatcgaaaagattactcgaaccgattgac
gacagaaagagaagaagaaagcacaaaaagagatcatacgatccatatgcggattcttcg
aagcagaatccaaatatacctcttgccagaaagaggaagaggagggacctgggaaagcag
gccacttttaagaaatag

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